Corvus cornix (hooded crow): 104689675
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Entry
104689675 CDS
T03546
Symbol
EBF1
Name
(RefSeq) transcription factor COE1 isoform X1
KO
K09103
early B-cell factor
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104689675 (EBF1)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
104689675 (EBF1)
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
104689675
NCBI-ProteinID:
XP_039415468
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Position
13:4273655..4544447
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AA seq
604 aa
AA seq
DB search
MFGIQESIQRSGSSMKEEPLGAGMNAVRTWMQGAGVLDASTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTML
VWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRL
QKVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHN
QLPALANTSVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQT
NYNSVTTSMNGYGNAGMSNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSG
IFSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQDQSFVDSSKYSTAGSLQG
LAFS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggaaagcatccagcggagtgggagcagcatgaaggaagagcccctc
ggcgcggggatgaacgcggtgcggacgtggatgcagggagccggcgtcctggacgccagc
acggccgctcagagcggagtgggtctggcccgggctcacttcgagaagcagccgccttcc
aacctgaggaagtccaactttttccacttcgttctggctctgtacgaccggcaggggcag
cccgtggagatcgagcgcaccgccttcgtgggcttcgtggagaaggagaaggaagccaac
agcgaaaagaccaacaacgggatccactaccgcttgcagctgctctacagcaatgggatc
aggacggagcaggatttctacgtccgactcatcgactccatgaccaagcaggcgatagta
tatgaaggccaagacaagaacccagaaatgtgccgagttctgctcacgcatgaaataatg
tgcagccgctgttgtgacaagaaaagctgtggcaacagaaatgagactccatcagatcca
gtgataattgacaggttcttcttgaaatttttcctcaaatgtaaccaaaattgcctaaaa
aatgcaggaaaccctcgagacatgcgtcgattccaggtcgtggtgtctacaacagtcaac
gtcgatggccatgtgttggcagtgtcggacaatatgtttgtgcacaacaattccaagcat
gggcggagagctcgaagactcgatccctcggaaggtacgccttcttatctggaacatgca
gctacaccatgtatcaaagccatcagtccaagtgaaggatggactacaggaggtgccact
gtcatcatcataggagacaatttctttgatgggttacaggtcatattcggcaccatgctg
gtttggagtgagctgattactccgcatgccatccgtgtacagacgcctccccgacatatc
ccaggggttgtagaagttacattgtcttacaagtctaagcagttttgcaagggaacgcct
ggaagattcatttacacagctctgaacgaacccaccattgactatggtttccaaaggtta
cagaaggttatcccccggcaccctggtgaccccgaacgcttgccaaaggaagtaatactt
aagagggctgctgatttagtagaagcactctatggtatgccacataataaccaggaaata
atcctgaaaagagctgcagacatcgccgaagcactctacagcgtcccccgcaaccacaac
cagctccccgccctcgccaacacctccgtccacgcgggaatgatgggagtcaattccttc
agtggccagctcgctgtcaatgtctccgaagcctcccaagccaccaaccagggtttcact
cgcaactccagcagtgtgtcacctcatggctacgtgccaagcaccaccccgcagcagaca
aactacaactctgtcacaacaagcatgaatggctatgggaatgctggaatgtcaaattta
ggcggttctccaaccttcctgaatggatctgctgccaattctccctatgccattgtgcca
tcaagtccaacaatggcctcctccactagcctcccctccaactgtagcagctcctctggg
attttctccttctcaccagccaacatggtctcagcggtgaaacagaagagtgcgtttgcg
cctgtcgtgagaccccaaacctccccacctcccacctgcaccagcaccaatggcaatagc
ctgcaagaccagtcttttgtggactctagcaagtactccactgcagggtctctccagggg
ctggccttctcctga
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