Corvus cornix (hooded crow): 104689733
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Entry
104689733 CDS
T03546
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw02010
ABC transporters
ccw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104689733 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104689733 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccw02000
]
104689733 (ABCA1)
Transporters [BR:
ccw02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104689733 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
104689733
NCBI-ProteinID:
XP_019141758
LinkDB
All DBs
Position
Z:complement(31649570..31741857)
Genome browser
AA seq
2262 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDARRLLLYSQQDT
SIKDVQKVLGKLHKLGNSSALDLKLRDFLIDNETFSDFLHHNVSMPSSAVEELLDAGVNL
QQVIVSGYRMRLQDLCKNSTLSEFLTIQNQTAATDSEAFICTLSKEKLHAAEQAFRANLN
PLKPLQRRLSFNSSLWDLSETVETLRESIGKLVKELLSMKSWSDMRQEVMFLTNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVINFYDNSTTPYCN
EIMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAVRKVMSEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPASNWTVEDVARFLSNNPEDFETENG
SLYTWMDAFNETDRAIQTISRFMECVNLDKLEPVPTEVQLINKSLELLDERRFWAGIVFT
EIAPDSTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDVFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLVPLLMSAGLLVLILKMGNLLPYSDPSVVF
IFLSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDHISFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQHPHPDQKGSSEVCKEEEPVHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMATDV
GLPHKLKARTSRLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQM
KGWKLTQQQFVALLWKRMLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYDEQYTFVSNDAPEDAGTHKLLDALLDKPGFGTRCMQGHSIPDTPCTVGQKEWTTA
SVPESVLDTFLKGNWSMENPSPSCECSSEKIKKMLPVCPPGAGGLPPPQREQDTADILQN
LTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRYGGFSLGASSSLVLPPSHEVTDAIKQVK
KILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFVNVINNAILRASLQ
QGENPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVVIIFICFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLKDI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGEDRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGE
KYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFF
GHAFPGSVLKEKHRNMLQYQLPSSPSSLAKIFSILSQNKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctggggttgctgctatggaagaactttacctacagaagaaga
cagactttccagctgctgattgaagttgcctggcctctgtttatcttctttatcctgatc
tctgtaagactttcatatccgccctatgagcagcatgaatgtcattttccaaataaagct
atgccttcagcaggaaccttgccatggatacaggggatcatctgcaatgccaacaaccca
tgtttccgctacccaactcctggggaatcccctggtattgttggaaacttcaatgcctcc
attgtttcccgcctgttctcggatgccaggaggttactgttgtacagccaacaggacaca
agtataaaggatgtccagaaggtcctgggaaaactacacaagttgggaaattcctctgcc
ttagacctgaaacttcgggatttcctgattgacaatgagacattctctgacttcctccat
cataatgtgtccatgccatcatctgcagtagaggagctgctggatgcaggggtcaacctc
cagcaggtcattgtgtctggttatcgaatgcgactgcaagatctctgcaaaaactcaaca
ttgtctgaatttctcaccatccaaaatcagacggcagccacagactctgaagccttcatt
tgcaccttgtcaaaggaaaaactccatgcagctgagcaagccttccgtgctaaccttaat
cctttgaagcctcttcagagacgactttctttcaattcctccttgtgggatctctcagaa
actgtggaaactttgagagagagcattgggaagcttgttaaagagctgctgagcatgaag
agctggagtgacatgaggcaagaggtgatgttcctgaccaatgtgaatgcctcaaactcc
tctacgcagatctatcaggctgtgtcacgcatcgtgtgtggccatcctgagggtggaggg
ctcaaaattaaatccctcaactggtatgaggataacaattacaaagcactgtttggaggc
aacagcactgaagatgatgtgattaacttctatgataactccacaacaccctactgcaat
gagataatgaagaacctggaatccagcccgctttccaggattatctggagggctttgaaa
cccttactgattgggaagatcttgtacactccagatacgccagctgtaaggaaggtcatg
tctgaggtgaacaggacattccaggagctgggtgtgtttcgtgacctcgggggaatgtgg
gaggagataagcccaaagatttggacatttatggaaagtagtcaggaaatggatctcatt
cggacgttgctgaaaggcaaagccctctgggacctgcatttgccagcttccaactggaca
gtggaagatgttgctcgtttcctgtcaaacaatccagaggactttgagacagaaaatggc
tctctgtatacctggatggatgccttcaatgagacagaccgggctatccagaccatctcc
cgcttcatggagtgtgtcaacttggacaaactggagcctgtgcccacagaagtccagctc
ataaacaagtccttggagcttctggatgaaaggaggttctgggccggcatagtcttcact
gaaatagctcctgacagcacagaccttcctcagcatgtgaaatacaagatacgcatggac
attgataatgtggagaggaccaacaagatcaaggatgggtactgggatcctggtccccgt
gctgacccctttgaggacatgcgctatgtctggggaggctttgtctacctgcaggatgtg
gtagaacaggccatcatcagagttcagacaggcacggagaagaagacaggagtttatgtg
cagcagatgccctacccatgttacgtggatgacgtatttctgcgtgtcatgagccgctcc
atgcctctcttcatgactctagcttggatctactcagtggctgtgataattaagggcatt
gtgtatgagaaggaagcccgcctgaaagaaacaatgaggattatgggacttgacaatggc
atcctttggttaagttggttcattagtagccttgtccctctcctgatgagtgcaggattg
ctggtgctgatcctgaagatggggaatctgctgccctacagcgaccctagtgtggtgttc
attttcctctcaatcttcggtgttgtgaccatcctccagtgcttcctcatcagcaccgtg
ttctccagggccaacctggcagctgcctgtgggggcattgtctacttcacgctgtaccta
ccttatgtgctgtgtgttgcctggcaggaccatatcagcttctcactcaagatttttgcg
agcctgctgtctccagtagccttcggtttcggttgcgagtacttcgcacttttcgaggag
cagggagttggtgttcagtgggacaacttctttgagagcccattggaagaagatggcttt
agcatcaccacatcggctgtcatgatgctgtttgatacttttctgtatggagtcatgacc
tggtacattgaatctgtcttcccaggccagtatgggattcccagaccctggtactttcct
tttacaaagtcctattggtttggggaggaaccacaggacaggcagcatccccatcctgac
cagaaggggtcttcagaagtctgcaaggaagaagagccggtgcatctgagtcttggtgtt
tccatccagaacctggtcaaagtttaccgtgatgggaagaaggttgctgtagatggtctc
acacttaacttctatgaaggacaaatcacctcctttctgggacataatggagcagggaaa
accactaccatgtcgattttgactggcttgttccccccaacttcgggtacagccttcatc
ctgggcaaagatatccgctctgagctgagcaccatcaggcagaacctgggagtatgtcca
caacacaatgtgctgtttgacttgctgactgtagaggagcacatctggttctatgctcgg
ctcaaagggctgccagaaaagaaggtgaaagaggagatggagcagatggcaacagatgtt
ggtttgcctcacaaactgaaagctaggacaagcagactctcaggtggcatgcagaggaag
ctctctgttgccttagcatttgtcggtggctccaaggttgtcattctggatgagcctaca
gctggggtagatccttattctcgcagagggatatgggaactgcttctgaagtatcggcaa
ggtcgcactatcattctctccacacaccacatggatgaggcagacattctgggggaccgg
attgccatcatttctcatggcaagctctgctgtgttggctcttctctcttcctgaagaac
cagctgggaacaggctattatttgaccctggtcaaaaaggatgtggattcctctctaagc
tcctgccgaaacagcagcagcacagtttcctatctgaaaaaggatgacagtgtctctcag
agcagctctgatgctggccttggcagtgaccatgaaagtgacacactgacaatagatgtc
tctgcaatttcaaatctcattacgaagcatgttcctgaggcaagactagtagaggacata
ggccatgaattaacctatgtcttgccatacaaagctgctaaagagggagcttttgtagag
ctgttccatgaaattgatgaccgtctttccgatcttggcatttccagctatggcatctcc
gaaactactctggaggagatcttcctgaaagtggctgatgatagcggtgtggatgcagaa
acctcagatgggacgttgccagccagaaggaacagacgtgtgtttggagacagacagagc
tgccttcgtccatttacagaagacgatgcatttgatcctaatgactcagacatagatcca
gcagaatccagagagacagaccttctcagtggcatggatgggaaaggctcctaccagatg
aagggctggaagctcacccagcagcagttcgtggctctgttgtggaagaggatgctcatt
gccaagagaagccggaagggcttctttgcccagattgtgcttccagctgtctttgtgtgt
attgctctcatgttcagcctgattgttcctccttttgggaagtatcccagcctggaatta
caaccctggatgtatgatgagcagtacactttcgttagcaacgatgctccagaagatgca
ggcactcacaagctgttggacgcccttcttgataagcctgggtttgggacacgctgtatg
cagggacattccatcccagacactccttgtactgtggggcagaaggaatggaccactgct
tcagtcccagagtcagtcctggacaccttcttgaaaggcaactggagcatggagaaccct
tccccatcttgcgagtgcagcagtgagaagatcaagaagatgctgcctgtgtgcccccct
ggtgcaggcgggctgccacccccacagcgtgagcaagacacagctgacatcctccagaat
ctgacaggccgcaatatatcagactacctagtgaagacctacgcacagatcattgggaaa
agcttaaagaataaagtctgggtgaatgagttcaggtatggtggcttttccttgggagcc
agcagttcccttgtgcttcctccaagccatgaagtcactgatgccattaagcaggtgaag
aaaatcttggagctggcacaggggagttctggagatcgatttctcaacagcttatcaagt
ttcatgaagggcctggatacaaagaataacgtgaaggtgtggtttaacaacaagggctgg
catgccattgcatccttcgtgaatgtgatcaacaatgccatccttcgggccagcctccag
cagggtgaaaaccccagtgcttatgggatcactgccttcaatcacccactcaacctcacc
aagcagcagctctctgaagtagccctgatgaccacctctgtagatgtcctcgtctccatc
tgtgtgatctttgccatgtcctttgttcctgccagctttgtggttttccttattcaggaa
cgtgtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcctgtgatctactgg
ctggccaattttgtatgggatatgtgcaactacattgttccagctacactagttgtcatc
atcttcatctgcttccaacagaagtcctatgtatcctcctccaacttgcctgtgctggct
ctccttctgtttctctatgggtggtccatcacccctctcatgtatccagcctccttcgtg
ttcaaaatccccagcacggcatatgttgtgctgaccagtgtgaaccttttcattggcatc
aatgggagtgtggccacctttgtcctggagctcttcaccaacaataagctgaaggacatc
aatgacatcctgaagtctgtcttcctcatcttcccccacttctgcctggggcggggactc
attgacatggtgaaaaaccaggctatggctgatgctctggagagatttggagaggatcgt
tttgtgtcccctctgtcatgggacctggtgggaaggaatctctttgccatggcagtagag
ggcgttgtcttttttctcatcacagtgctcatccagtacaggttcttcatcaaacccagg
cctgtctatgccaagctgcctcctgtgaatgatgaagatgaggatgtaaccagagagagg
cagaggataattagtggaggaggacagagtgacattttggaaatcaaggagctaaccaag
atttacagaatgaagagaaaaccagcagttgataggatctgtgttggaatcccccctgga
gagtgctttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgcta
actggagatacagatgtgacaggaggagaagctttcctcaaaggaaacagtatcttgtcc
aacatccaagaagtccatcagaacatgggctactgcccacagtttgatgctgttaatgaa
ctgctgacagggcgagagcacctggagttctttgcactcctgagaggtgttccagagaaa
gaagtctgcaaggttggcgagtgggcaattcggaaactgggccttgtgaaatatggagaa
aaatatgctgggaattacagtggagggaacagacgcaagctttccacagccattgccctc
attggagggccacctgtggtgttcttggatgagccaacaacagggatggatcccaaagca
cgtcgtttcttgtggaactgtgctctgagtgtaatcaaggaggggagatcggtggtgctc
acatctcacagcatggaagaatgtgaagccctgtgcactcgaatggcaataatggtcaat
gggcgatttaggtgcctgggcagtgtccagcatctaaagaacaggtttggagacggttac
accatagtggtgagaattgcaggggcaaacccagacctgaagcctgttgaggagttcttt
gggcatgccttccctggaagcgtcctgaaggaaaaacatcggaatatgctgcagtaccaa
cttccctcttcaccatcctccctggccaaaatattcagtattctctcccagaacaaaaag
agactccacatagaagactactccgtttctcagaccacacttgaccaagtttttgtaaat
tttgctaaggaccaaagtgacgacgaccatactaaggacctgtcactgcataaaaaccag
actgtggtagacattgcaatccttaactccttcctgcaagacgagaaggtaaaagaaagt
tgtgtgtga
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integrated database retrieval system
