Corvus cornix (hooded crow): 104689770
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Entry
104689770 CDS
T03546
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X4
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104689770 (RNF38)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104689770 (RNF38)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104689770 (RNF38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf_RING_Vps8_fungal
zf-C3H2C3
zf-RING_16
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
104689770
NCBI-ProteinID:
XP_010398379
LinkDB
All DBs
Position
Z:28852462..28956810
Genome browser
AA seq
469 aa
AA seq
DB search
MNKPLHLNSEDSPSPKRQRLSHSVFDYTAASPAPSPPMRPWEMTSNRQPPLARPNQHHFS
GERCNTPARNRRSPPVRRQRTRRDRLSRHNSISQDENYHHLSYGQQQAIEEPRAFRPPNV
SPRMLHPAAHPPQQNAVMVDIHDQIHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSAQQV
PGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLHPPHISTHHPPH
LPPPGQFVPFQAQQSRSPLQRIENDVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLAH
DPLHQEMSFGVPYPPFMPRRLTGRSRYRSQQPIPPHPYHPSLLPYVLSMLPVPPAVGPAF
SFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVC
MCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaataagccactgcatttgaatagcgaagacagtcctagtcccaagcgacaacgcctt
tcccattcagtctttgactacacagcagcatcaccagccccatcaccaccaatgcgacca
tgggagatgacatcaaataggcagcctcctttggctcgacccaaccaacaccacttctca
ggggaacgatgcaacacacctgcacgaaacaggaggagtcctcctgttcgacgtcagaga
acaaggagagatcgtttgtctagacataattctattagccaggatgaaaactatcaccat
ctctcctatggacagcagcaagcaatagaagagcctcgagcctttcgcccaccgaatgta
tctcctcgtatgttgcacccagccgctcacccaccacagcagaatgcagtgatggttgac
attcatgatcagatccatcagggcacagttcctgtttcatacacagtgacaactgtggct
ccacatgggataccactttgcacaggccagcacattccagcctgcagcgcgcagcaggtc
ccagggtgctcagtggttttcagtggccagcaccttccagtttgcagtgtgcctccccca
atgcttcaggcatgctcagtccagcacctacctgtaccatatgcagcatttccacccctc
atttctagtgacccattccttttgcatcctcctcatatctctacacaccaccctcctcac
ttacctcctccaggacaatttgttcctttccaagcacagcagtcacggtcgccacttcaa
aggatagaaaatgacgtagaattgcttggagaacaccttcctgtaggaggttttacatac
cctccctcagcccatccaccaacgttgcctccctcagctcctcttcaattcttagcccat
gatccattacaccaggagatgtcatttggggtaccttacccaccttttatgcctcgaaga
ctcacagggcgcagcagataccgatcacagcagccaataccaccacacccttaccatccc
agcctattaccttatgtgctatcaatgctcccagttccaccggcagttggaccagctttc
agctttgagttggatgtggaagatggagaggtagaaaactatgaggcactgctgaatttg
gcggaacgtctgggagaagccaaaccacggggattaacaaaagcagacattgagcagctt
ccatcctacaggttcaatccaaacaatcaccaatcagagcagacactatgtgtggtgtgc
atgtgtgattttgagtcaaggcagctacttagagtcttaccttgtaaccacgagttccat
gccaagtgtgttgataaatggctgaaggcgaatcgtacctgcccgatttgtagagctgat
gcctcagaagtgcatcgtgattcagaatga
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integrated database retrieval system
