Corvus cornix (hooded crow): 104689808
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Entry
104689808 CDS
T03546
Symbol
SPTLC1
Name
(RefSeq) serine palmitoyltransferase 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00600
Sphingolipid metabolism
ccw01100
Metabolic pathways
Module
ccw_M00094
Ceramide biosynthesis
ccw_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
104689808 (SPTLC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccw01007
]
104689808 (SPTLC1)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
104689808 (SPTLC1)
Amino acid related enzymes [BR:
ccw01007
]
Aminotransferase (transaminase)
Class II
104689808 (SPTLC1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
PAD
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
104689808
NCBI-ProteinID:
XP_039423000
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Position
Z:32947776..32981914
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AA seq
475 aa
AA seq
DB search
MAAAGVGQQWVLVEMVQAFYEAPAYHLILEGILILWIIRLLFSKTYKLQERSDLTLKEKE
ELIEEWQPEPLVPPVPKDHPALNYNIVSGPPTHIITVNGKECINFASFNFLGLLNNEKVK
SAAQASLKKYGVGTCGPRGFYGTFDVHLELEERLAKFMRTEEAIIYSYGFATIASAIPAY
SKRGDIVFVDEAACFAIQKGLQASRSNIKLFKHNDMADLERLLKEQETEDQKNPRKARVT
RRFIVVEGLYMNTGDICPLPELIKLKYKYKVRIFLEESLSFGVLGEHGRGITEHFGINID
DIDLISANMENSLASIGGFCCGRSFIIDHQRLSGQGYCFSASLPPLLAAAAIEALNIMED
NPDIFQTLRAKCERIHKALQGISGLKVVGESFSPALHLQLEESCGSRENDVKLLKRVVDY
CMNSGIALTQARYLEKEEKCLPPPSIRVVITVEQTEQELDKAASLLKEAAQSVLN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggcgtggggcagcagtgggtgctggtggagatggtccaggccttctac
gaggctcctgcttaccatctcattttagaaggaattctaatactatggataatcagactt
cttttctccaagacatacaagcttcaagagcgatctgatctaacacttaaggaaaaagaa
gagttgattgaagaatggcagccagagcctcttgtacctcctgtgccaaaagatcaccca
gctctcaattacaacattgtttcaggtcctcccacccatataatcactgttaatggcaag
gaatgtataaactttgcatcatttaacttccttggacttttgaataatgaaaaggttaag
agtgcagcccaggcttctctgaagaaatacggtgttggcacttgtggacccagaggattc
tatggtacttttgatgtgcacttagaattagaagaacggctagcaaaattcatgaggaca
gaggaagctattatatactcatatggatttgcaacaattgccagtgctatccctgcatat
tcaaagagaggggacattgtgtttgtagatgaagctgcctgctttgctattcagaaggga
ttacaagcatctcgtagtaacatcaagttatttaagcataatgatatggctgaccttgaa
cgactgttgaaagaacaagagactgaagatcaaaagaatcctcgaaaggcccgtgtaact
cgaaggtttattgtagtggaaggattgtatatgaacacaggagacatttgccctcttcca
gagttgataaaattgaagtataaatacaaagttagaatatttttggaggagagcctttcc
tttggagtccttggagaacatggaagaggaattactgaacactttggaataaatattgat
gatatagatcttattagtgcaaacatggaaaattcactggcttctattggtggattttgc
tgcggaagatcttttattattgatcatcagcgattgtctggtcaaggctattgcttttct
gcctccctacctcctttgttagctgctgctgctattgaggctctgaatattatggaagat
aatccagacatttttcagactctccgggctaaatgcgaacgaattcacaaagctttacag
gggatttctggtttaaaagtagtgggagaatctttttctccagcattgcacttgcagttg
gaggagagctgtggatctagagagaatgatgtgaagttactcaaaagagttgtggattat
tgcatgaatagtggtattgcgttaacacaggctcgctatctggagaaagaagaaaaatgt
cttcctccacccagtattcgagtagtgataacagtggaacaaacagaacaagaactggac
aaagctgcatcacttcttaaggaagctgcacagtctgtattgaattag
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