Corvus cornix (hooded crow): 104689913
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Entry
104689913 CDS
T03546
Symbol
ARID1B
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104689913 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104689913 (ARID1B)
03021 Transcription machinery [BR:
ccw03021
]
104689913 (ARID1B)
03036 Chromosome and associated proteins [BR:
ccw03036
]
104689913 (ARID1B)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Helix-turn-helix
ARID
104689913 (ARID1B)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104689913 (ARID1B)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104689913 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
104689913
NCBI-ProteinID:
XP_039425736
LinkDB
All DBs
Position
3:complement(53735420..54063098)
Genome browser
AA seq
2294 aa
AA seq
DB search
MANNAAPAAAAGNNNNASGGGGGSSSEPALKEGGSSSALSSSSSSSSSSSSSSSNPGSAM
ETGLLPNHKLKSVGRSPAAPPHHHHAHHPQHHAHHHHAHHPHHHHHALQQQLNQFXRRRR
RRSRRPQHHPVQNNNSSLGGGGGGSGSNNNGGGGGGAAQPSADMEQQQHGGKDSVLGAQA
EPPSSQQMLNKGADEEEMPGKMGEPIGGRYEHPGLGPLGGQQQPQQPPPSAGSGGGGLGG
GGGSGGGGGGGPSAVGVSEFNSYYGNPAPAPASSATASRAGPCFDQHGGQQSPGMGIMHP
TAAPNSMDPLQNSHEGYPNSQYNHYPGYGRGPGGGGAGGGGGAGAVAAAAAXAGGGGYGG
SAAGYGVLSSPRQPGGGMMMGPGGGAGLGKAGAGAAAAAGGFARFSGQNQHPSGATPTLN
QLLTSPSPMMRSYGSSYPDYSSPSAPPQPQPQAAAAAPGSQQAAAGMGMGKDMGAQYGAA
NPAWAAAQQRNHPAMSPGNTGQAISRTQGSPMDPMVMKRPQLYGMGNNPHSQAQQSSPYP
GQSYGPPGPQRYPVGMQGRAPAAMGGMQYPQQQIPPQYGQQGVSGYCQQGQQPYYNQQPQ
PQHLPPQAQYLSQAQQRYQAQQDMSQEGYGTRSQPPMAPGKPNHEDLNLIQQERPSSLPV
EVLASEDATFGHKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGEQSNPAQSPFSPHASP
HLSGIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPM
PQDRGFMAGIQRNPQMSQYGPQQTGPSMSPHPSPGGQVHPGIGSFQQSNSSGTYGPQMSQ
YGPQGNYSRPPTYSGVPNTSYSGPGPGMGINANSQMHGQGPSQPCGTMPLGRMPSAGMQS
RPFPGNMSSMTPNSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGNFPA
MNQSSIMGSSSPYTQPMNNSSGLMNPQAPPYSMAPNMVNSSTAPMGLADMMTPGESKLPL
PLKADGKEEGAPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSI
SSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKMWVDRYLTFMEERGTPVASLPAV
GKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSSAASSLKKQYIQYLFAFE
CKIERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPGDLKPP
TPASTPHGQMTPMQGGRNSAVSVHDPFSDVSDSAFPKRNSMTPNAPYQQGINMPDMMGRM
PYEPNKDPFGGMRKVPGSNEPFMTPGQMPNSGIQDMYNQSPSGAMSNMSMSQRQQFSYGS
GYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGMYPQQQNYKRHMDGMYGPPAKRHEGDMYN
MQYGNQQQEMYNQYSNAYTGPDRRPMQGQYPYPYNRERMQGPGQMQQHGIPPQMIGGPMQ
SSSSSEGPQQNMWPTRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMMVPDQRINHESQW
PSHVNQRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAPSPASFQRSLENRMSPSK
SPFLPSMKMQKVIPTVPVSQVTGPPPQPPPIRREITFPPGSVEASQPVLKPRRKITSKDI
VTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCL
IDIFGILMEYEVGDPGHKALDHKVAKKDDSQSLAEDTGKDENDECIDYFDEDEEEGEDEK
VEGEEKSIVFSTPGAIADPSERPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFDSG
LLHWQLGGGDTTEHIQTHFESKMEIPPRRKAPPPLNSPSKKKDLEGKSESEEQQEKSITA
TIDDVLSARPGALPEDSNSGSQTESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTIT
HWQDSLAKRCICVSNIVRSLSFVPGNDTEMSKHPGLVLILGKLILLHHEHPERKRAPQTY
EKEEEEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHW
MVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATL
VRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDGVTMAQYQQS
QHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLV
ASVICDVLFQIGQL
NT seq
6885 nt
NT seq
+upstream
nt +downstream
nt
atggccaataacgcggctcccgccgctgccgccggtaacaacaacaacgccagcggcggc
ggtggcggctcctcctcggagccggctctgaaggaaggtggaagctcctcggcgttatct
tcatcttcttcgtcttcttcctcctcctcctcctcctcctccaacccgggctcggctatg
gagacggggctgctccccaaccacaagctgaagagcgtcggacgatcacccgccgcgccg
ccccaccaccaccatgcccaccacccgcaacaccatgcccaccaccaccatgcccaccac
ccgcaccaccaccaccatgcactacagcagcagctaaatcaattcnnccgccgccgccgc
cgcaggagccgccgccctcagcaccatcccgtgcagaataacaacagcagcctcggcggc
ggcggcggcggcagcggcagcaacaacaacggcggtggcggtggcggcgctgctcagccc
agtgcagacatggagcagcagcaacatggaggaaaagacagtgttttgggcgctcaggcc
gagccccccagcagccagcaaatgctgaataaaggcgccgacgaggaggagatgcccggc
aagatgggcgagcccatcggcggccgctacgaacaccccggcttgggacccctgggcgga
cagcagcagccccagcagccgcccccgagcgctgggagcggcggcggcggcctcggcggc
ggcggcgggagcgggggaggcggcggcggcggcccctccgcggtgggtgtctcggagttc
aatagctattatggcaaccctgcccctgcccctgccagcagcgctacggcgagccgcgcc
gggccttgctttgatcaacatggcggacaacaaagccccgggatggggataatgcacccc
acggcggcccccaacagcatggaccccctgcagaactcccacgaagggtaccccaacagc
cagtacaaccactacccgggctacggccgcggccccggcggcggcggcgcgggcggcggc
ggcggcgcgggagccgtggcggcggcggccgccngggcaggcggcggcggctacgggggc
tccgcggcgggctacggggtgctgagctccccgaggcagcccggcggcggcatgatgatg
ggccccggcggtggagccggcctcggcaaggctggtgccggcgcggcggcggcggccggc
ggctttgcgcggttctccgggcagaaccagcacccgtccggggccacccctaccttgaac
cagctgctcacgtcccccagccccatgatgcggagctacggcagcagctaccccgactac
agcagccccagcgccccgccgcagccccagccccaggcagcggcggccgccccgggaagc
cagcaggcagcggcgggcatgggcatgggcaaggacatgggcgcccagtacggagcggcg
aacccggcctgggcagcggcacaacaaaggaaccacccggcgatgagccccgggaacacc
ggacaggccatcagcaggacccagggcagtccgatggatccgatggtgatgaagaggccg
cagctgtacggcatgggcaataaccctcactctcaggcacagcagagcagcccctacccc
gggcagtcctacggccctcccggcccccagcgctatcccgtgggaatgcagggccgagcc
ccagcagccatgggaggaatgcagtatccacagcaacagatcccacctcagtatggtcag
caaggtgtaagtggctactgccagcagggccagcagccgtactacaaccagcagccgcag
ccccagcacctgccgccccaggcacagtatctgtcgcaggcccagcagaggtaccaggct
cagcaggacatgtctcaggaaggctatggaaccagatctcaaccccctatggccccagga
aagcctaaccatgaagacttgaatctaatccagcaagaaagaccatcgagcttaccagtt
gaagtcttggcctccgaggatgctacatttggacacaaggatttatctggatccattgac
gacttgccgactggaactgaagcaaccctcagctcagctgttagcgcgtcaggctctaca
agcagccaaggggagcagagcaaccctgcacagtctccgttttcccctcatgcttctcca
catctctctggcatccctgggggtccatcgccttcccctgtaggctcacccgttggaagc
aaccagtcaagatctggtcccatttctccagcgagtattccaggcagtcagatgccacca
cagcctcctggcagccagtcagaatccagctcccaccctgccttgagccagtcaccaatg
ccacaggaccgaggtttcatggcaggcatacagaggaacccccaaatgtcacagtatgga
cctcaacaaactggaccttccatgtcaccacacccatcacctggaggtcaagtgcatcct
ggaattggtagctttcagcagagtaattcaagtggtacttatgggcctcagatgagccag
tatggaccacaaggaaactactccagaccaccgacatacagcggtgtgcccaacacaagt
tacagtggcccaggacctggcatgggtataaatgccaacagtcagatgcatggacaaggg
ccaagccagccttgtggtaccatgcccctgggacggatgccatcagctgggatgcagagc
agaccatttcctggaaacatgagcagtatgacccccaattctcctggcatgtctcagcag
ggaggccctgggatgggcccacccatgccaactgtgaaccgtaaggcacaggaggcggct
gctgcagtgatgcaggctgctgcaaactccgctcagagcaggcaaggcaattttcctgcc
atgaatcagagcagcattatgggatccagctccccctacactcagccgatgaacaacagc
tctggcctgatgaacccgcaagctcctccttacagcatggcacctaacatggtgaacagt
tcaacagcacctatgggtcttgcagatatgatgacacctggtgagtccaaactacccctt
cctctcaaagcagatggcaaagaagaaggagccccccaacccgagagcaagtcaaaggat
agctacagctctcagggtatttctcagcccccaaccccaggcaacctgccagtcccttcc
ccaatgtccccaagctctgctagcatctcctcatttcatggagatgaaagtgatagcatt
agcagcccaggctggccaaagactccatcaagccctaaatcaagttcctctaccacaact
ggagagaagatcactaaagtctatgagctaggaaatgagccggagcgcaagatgtgggta
gatcggtacctgacgttcatggaggagaggggcacgcctgtggccagtctgccagctgtg
ggcaagaagcccttggacctgttcaggctctatgtctgtgtcaaagagattggaggtttg
gcacaggttaataaaaacaagaaatggcgtgagctggcaaccaccttgaacgttggcact
tcgagcagcgcagccagctccctgaaaaaacaatacattcagtacctgtttgccttcgag
tgcaagattgagcgaggggaggagcccccgccagaagtcttcagcactggagataccaag
aaacaacctaagattcagccgccatctcctgctaattctggttccttgcaaggcccacag
actccacagtccactggtagtaattccatgacagaagtgccaggcgatctgaagccccca
acaccagcatccacacctcatggacagatgacacctatgcagggtggcagaaacagcgcg
gtcagtgtgcatgatcccttttctgatgtaagtgattcagcattcccaaagcgaaactcc
atgacgccaaatgcaccataccagcagggaataaacatgccagatatgatgggaaggatg
ccatatgagccgaataaagatcctttcggtggaatgagaaaagtgcctggaagcaatgag
cctttcatgacccctggacaaatgcctaacagtggaatacaagatatgtataaccagagt
ccatctggagcaatgtccaacatgagcatgagccagcgacagcagttctcttatggaagt
ggctatgacaggaggcatgaaccatatgggcagcagtatccaggacaaggacctccctca
ggacagccaccatatggagggcatcaacctggaatgtatccacagcagcagaactacaag
agacacatggatggcatgtatgggcctccagccaaacgccatgaaggggatatgtataac
atgcagtatggcaaccagcagcaggaaatgtataaccagtacagcaacgcttacacaggg
cctgacaggaggcccatgcagggacagtatccatatccatacaacagggagaggatgcag
ggcccaggacaaatgcagcagcatggaatacctccccagatgattggtggccctatgcaa
tcgtcgtcctccagtgaaggtcctcagcagaacatgtggccaacacgaaatgatatgcct
tacccttaccagaacaggcaaggcccaggaggccctgcacaggctcctccgtatccaggg
atgaatcgcactgatgatatgatggtacctgaccagaggataaaccacgagagtcagtgg
ccttctcatgtcaaccaacggcagccttcttatatgtcatcctcagcctccatgcagcct
atcactagacctcctcagtcatcctaccagacaccaccctctatgccaaaccacatctct
agagctccaagtccagcatccttccagcgctctttggaaaaccgtatgtctccaagcaag
tctcctttcctaccctccatgaagatgcaaaaggttatacccacagttccagtgtcacag
gtcacaggacctccaccccaaccaccaccgattaggcgagagattaccttccccccaggc
tctgtagaagcatcccaaccagtcttaaaaccaagacgaaagattacctcaaaagatatt
gtaactcctgaggcctggagagtgatgatgtctcttaaatctggtcttttggctgaaagt
acctgggcgctagacactattaatattcttctgtatgatgacagcactgttgctactttc
aacctctctcagttgtctggatttcttgagcttttagtagaatattttagaaaatgcctg
attgacatttttggaatccttatggaatatgaagtgggagatccaggccacaaagcactt
gatcacaaagtagccaagaaagatgatagtcagtccttggcagaggatactggaaaagat
gagaatgatgaatgtattgactattttgatgaagatgaggaggagggggaggatgaaaag
gtagaaggagaagaaaagagcattgttttttccactcctggtgccattgctgatccaagt
gagaggccaaaacaagccagtaaatttgacaagctgccaataaagattgtaaagaaaaat
aatctatttgttgttgaccgatctgacaaacttggacgcgttcaggaatttgatagtgga
cttctccactggcagcttggtggtggtgacacaactgagcatatccagactcactttgaa
agcaagatggagattccaccacgcaggaaagcccctcctcccttgaactctccaagcaaa
aagaaggacctcgaggggaaaagtgaatctgaggagcaacaagaaaagagtataacagca
accattgatgatgtcctctcagctcggccaggagcattacctgaagactcaaactctggt
tcccaaacagagagcagtaaatttccctttgggatccatcaagccaaaagccaccggaat
attaaactgctagaggatgagccaaggagccgggatgagactcctctatgcaccataact
cactggcaagactccttggccaaacgctgcatctgtgtgtcaaatattgtccgtagcttg
tcttttgtgcctggcaatgacaccgaaatgtccaaacatccaggcttggtgctgatcctg
ggaaagttgatccttcttcaccacgagcatccagaaagaaagcgagcgccgcagacttac
gagaaagaggaagaggaggacaaaggggtggcctgcagcaaggatgagtggtggtgggac
tgcctcgaggtcttgagggataatacattggtcacattagccaacatttctgggcagcta
gacttgtctgcttacacggaaagcatctgtttgccaattttggatggcttgctgcactgg
atggtgtgcccatctgcagaggcacaggatccttttccaaccgtggggcccaactcagtt
ctttcgcctcagagacttgtgctggagaccctgtgtaagctcagtatccaggacaataat
gtggaccttatcttggccacccccccattcagccgtcaggagaaactctacgctacttta
gttaggtacgttggggaccgcaaaaacccggtctgccgagaaatgtccatggcgctccta
tcgaaccttgcccagggggacacattagcagcaagggcaatagctgtgcagaagggaagc
atcggaaacttgataagcttcctggaggatggggtcactatggcccagtaccagcagagc
cagcataacctcatgcacatgcagcctccgcctctggagccgcctagcgtagacatgatg
tgcagggcagccaaggccttgctggccatggcgagagtggacgagaaccgctccgagttc
cttttgcacgagggtcgtttgctggatatctcaatatctgctgtcctgaactctctggtt
gcatctgtcatctgtgatgtactttttcagattgggcagttatga
DBGET
integrated database retrieval system
