Corvus cornix (hooded crow): 104689932
Help
Entry
104689932 CDS
T03546
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccw04040
]
104689932 (TRPC4)
Ion channels [BR:
ccw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104689932 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
104689932
NCBI-ProteinID:
XP_010398662
LinkDB
All DBs
Position
1:complement(51638863..51772841)
Genome browser
AA seq
975 aa
AA seq
DB search
MAQFYYKRSVNAPYRDRIPLRIVRAESELSHSEKAYLNAVEKGDYASVKKALEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPVLLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMLTCVVIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLSMQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFSKYSGLVPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETNEPGNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKARHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWLWRHLCKKKIRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGSKLSNLQTAKMSKDTASLSENEEN
SESEGNKKGKKKPFSLFDITTMIHPRSANIASEGHNVSNGSAMMVSESTQEKQKRVNFVT
DIKNFGLFHRRSKTNSVEQSTNKIYTVSEEVSRQQAEEQCEKTDELEEGELTMNCELNIQ
SPGKKCMLAESQKNSESLDSQEEGSICVSETEKMELQNSEPATLQNQLDKALDISIDSDG
KQETIVQGDYVITRL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttctactacaaaagaagtgtcaatgctccctacagagatcgtatccctctt
cgcatcgtacgggcagaatccgaactgtctcattcagagaaagcctatctgaacgccgtg
gagaaaggagattacgccagtgtaaagaaagctttggaggaagcagaaatttatttcaag
atcaatatcaactgcattgatcccctgggaagaactgcactccttattgcaattgaaaat
gagaaccttgagctcattgagctgctcttaagttttaatgtgtatgtgggagatgctctg
ttgcatgccatacggaaagaggtggttggggctgtggagctgctgttaaatcacaagaag
cccagtggagagaagcaggttccaccagtgcttctggacaagcagttttcagaatttacg
ccggatatcacacctattattctggctgcccacaccaacaattacgaaatcataaagctc
cttgtgcagaaaggggtgtctgtgccccggccacacgaggtgcgctgtaactgcgtcgaa
tgtgtctcaagctcagatgtggacagcctccgccactctcggtccagactcaatatctac
aaggctctggcgagcccatcattgattgctttgtccagtgaggatcctttccttactgct
tttcaactgagctgggagctgcaagaactgagtaaagtcgaaaatgagtttaagtcagag
tatgaggaactgtcacggcaatgcaagcaatttgcaaaagatctcctggatcagacacgg
agttccagggaattggaaattattcttaattacagagatgataacagcttgatagaagaa
caaagtggtaatgatcttgcaagattgaaactggcaattaagtaccgtcaaaaagagttt
gttgctcagcccaactgccagcagctgctcgcatcccgctggtacgacgagttccccgga
tggcggaggcgacactgggcagtgaagatgctgacatgtgttgtgataggactccttttc
ccagtcttctctgtgtgctacctgatagctcccaaaagcccattggggctgttcatcaga
aagccatttatcaaatttatctgccatactgcatcgtacttgacttttctgttcctgctg
ttgcttgcctctcagcacatcgacaggtcagacctcagcatgcagggacccccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatctggggtgaaattaaacag
atgtgggatggtggactgcaggactacattcatgactggtggaacctcatggattttgta
atgaattccttgtatttggcaacaatctctttgaaaattgttgcattttcaaagtatagt
gggttagttccacgggagagctgggacatgtggcatccaaccctggtggctgaagccctg
tttgcaatcgcaaacatctttagctccctgcgcttgatctcactattcactgcaaattct
cacctgggacctctgcagatatctctaggaagaatgttgctggacattttgaagtttctc
ttcatatactgtcttgtgctgctcgcttttgcaaatggattgaaccagctgtatttctac
tatgagacaaatgaacctggcaactgcaaaggaatacgatgtgaaaagcagaataatgca
ttttcaacgttatttgaaacactgcagtcattattctggtctatatttggactcatcaat
ctctatgtgaccaatgtgaaagcgaggcatgaattcactgaatttgttggggccaccatg
tttggtacctataatgtaatatctctggttgttctactcaacatgctaatagccatgatg
aataactcttaccaactcattgctgatcatgcagacattgagtggaagtttgctcgaaca
aaactctggatgagttactttgaagaaggaggaactctgcccactccttttaatgtcata
ccaagcccaaagtctttgtggtatctgatcaaatggttatggagacacctttgcaagaaa
aaaattagaagaaagcctgaaagttttggaacaatagggagacgtgcagctgacaatttg
aggagacatcatcaataccaggaagttatgagaaatctggttaagagatatgttgcagca
atgataagagatgccaaaactgaggaaggattgacagaagaaaattttaaggagttaaag
caagatatttccagctttcgctttgaagtcctgggtttgttaaaaggaagcaagctttcc
aatttgcagactgcaaagatgagcaaagacactgcttctctgtcagaaaatgaagaaaat
agtgagagtgaaggaaacaaaaaaggaaagaagaaacccttcagcctttttgacataaca
acgatgattcacccacgatcagccaatattgcctctgaaggtcataatgtaagcaatggc
tcagcaatgatggtgtcagagtccactcaggagaaacaaaagcgtgtgaattttgtaaca
gacataaaaaattttgggttgtttcacagacgatcaaaaacaaactctgtggagcagagt
acaaataaaatatacaccgtttctgaagaagtttcccgtcaacaggcagaagaacaatgt
gagaaaactgatgaactggaagagggagaattgaccatgaactgtgaattaaacatccaa
agtcctggcaaaaaatgcatgttagctgagtcgcaaaagaacagcgagtctttggattca
caggaagagggaagtatttgtgtttcagaaacagagaaaatggagttacagaactcagaa
cctgccactctgcagaatcagctggacaaggcattggacattagcattgactctgatggg
aaacaggaaacaattgttcagggtgactacgtgataacaaggttgtga
DBGET
integrated database retrieval system
