Corvus cornix (hooded crow): 104689965
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Entry
104689965 CDS
T03546
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00310
Lysine degradation
ccw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104689965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104689965
Enzymes [BR:
ccw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
104689965
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104689965
Heterochromatin formation proteins
Other heterochromatin formation proteins
104689965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
SET
Pre-SET
MBD
zf-HC5HC2H_2
PHD
Motif
Other DBs
NCBI-GeneID:
104689965
NCBI-ProteinID:
XP_039411489
LinkDB
All DBs
Position
1:complement(54314679..54363458)
Genome browser
AA seq
1229 aa
AA seq
DB search
MEEKKMLCDFFEEENLTSSREESTEGDVKTFWTQLGGRRVDVIFEQVQNVLLLLKEKIKN
GTATNQECWQAWALVNEANLGDLLTLANVSDELNGDGAQETEPKLQPLSDDSAADTKESS
DSEKEDMERTCPGSEEVSSKIQGLPLNVHYQNHKCSSACLANRAAGSYKGENPLKIPILF
DFQRRHAKADCLSKSLDVNYKAPCGRSLRSFRDVRNYLFETECNFLFLDHFSFNTYVLLG
RNTMTPEPLVFEFDISNGAESVPVSFCNTLDHARLPYFKYRKSSWPRGYYLNNFSSLFVD
SCDCTDGCIDRSKCACLQLTARGCSKTSLSPGGKRCRGYRYKRLEGPVPSGIYECSVLCR
CDKLMCQNRVVQHGIQVRLQVFNTEKKGWGVRCLDDIDRGTFVCTYSGRLMSRAEVLRDA
EQELKEKGAVNDRGHDFSSKKRKLDPDSSDSVIELVQTDENDIPENEESLSKTVVNENKS
TLVHPKNSSNAAVRRPGTRTLVFRNHQLKMVHSASSDEDDSSQIHQSSKTKLTSGTKKGK
EKSTQQQKEEHLMEIGQTGSADVDSAGCKRKSLSLQGIDCGKSGVLNDMCIMRPSNNAPL
KADCKKENSRQSKQDALCEEADGDGMLPKNANEENIYILDATKEGNVGRFLNHSCCPNLF
AQSVFVETHNRSFPWVAFFTNRHVKAGTELTWDYGYEAGSMPETEISCQCGVQKCRKKTL
GGMRDIAFSMEKALGKWLPDGIPRQCLARESNPRIRSVTPARPNARGGPGRASLIRCRRR
SGTPSPRRAGAAANQRRAAARGRGSGGRTAHALCPGRARSLPRGRVEGGGGGRGSDSSRG
PGRGASERSNPALRWKEEESRAGAEAVGFNSMLEVRGLGFFSLLPYGYTNTRIFLEPVRT
PGTVDSTFSPFLTKFLELDPLTGPEQGLCICIDSSFTAPGAFWIMAKMVRRTCAFCSEGE
AGSVMYIATERDIAAHQDCLLFSSGFVESEDQNPDNLGIRFDVASVLKELRRGKRLVCNF
CRKKGATVGCEERACRRSYHFFCALCDDAAVETDQVNGVYRVFCPKHDPGNRTSHYDKAN
KKRRRTLTSPTITEEMSTEETAEENHLRILKRKNNRHKVRIDFVRKCKQAGLLDDIFEEM
LDTLHLAQEKLMDDNTSETEYEETVMALFDCGLFENILSNIHSGTEEKIQELLENRKRLD
HKIELLQDLKAVIAPTPENTASTSSTMSE
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaaaaaaatgctgtgtgacttctttgaagaggagaaccttaccagttccagg
gaggagagcactgaaggtgatgtgaagacgttttggacacaattgggaggtagaagagtg
gatgtcatatttgagcaggtgcaaaatgtgctgttgttgctgaaggaaaagatcaagaat
ggaactgccacaaaccaagaatgctggcaggcttgggcactggtgaatgaagctaatcta
ggtgatctcttaaccctggcaaatgtaagtgatgagttgaatggggatggtgcacaggaa
accgaacccaaactgcagcctctttcagatgacagtgctgcagacactaaagaaagttct
gacagcgaaaaagaggacatggaaagaacatgcccagggagcgaagaagtatctagcaaa
atccaaggtttacctttaaacgtgcattatcagaaccacaagtgctctagtgcatgtctt
gccaacagagcagcaggctcctacaagggtgaaaatcctttgaagatcccaatcctgttt
gactttcaaaggcgccatgcaaaagcagactgcctttcaaaatcactggatgtgaattac
aaagctccttgcggtcggagcctgagaagctttcgagatgtgcgaaattacttgtttgaa
acagagtgcaatttcttatttcttgatcacttttccttcaacacatatgtactgttgggc
aggaacaccatgactcccgaacccctcgtgtttgagttcgatattagcaacggagccgag
tctgtgcccgtctccttctgtaacactctcgaccatgcaaggttaccttatttcaagtat
cggaagtcatcgtggccacgtggatattatctcaacaatttctccagcctgtttgttgat
tcctgtgactgcacagatggctgcatcgataggtcaaaatgtgcatgcctacagctaacg
gcaagaggctgtagtaaaacttctctgtctccaggtggtaaaagatgccgtggataccgg
tacaaaagactggagggacctgttcctagtgggatttatgagtgcagtgtgttgtgcagg
tgtgacaaactgatgtgtcagaacagagttgtacagcacggcattcaagtcaggctgcaa
gtgtttaacacggagaagaagggctggggcgtccgctgcctggatgacattgacaggggg
acatttgtttgtacttactcaggtagattaatgagcagagctgaagtattgagagatgct
gagcaagagctgaaagagaaaggtgcagtgaatgacagaggtcatgacttttcttccaaa
aaaagaaaacttgaccctgatagttcagactcagtgatcgaactggtgcagacggatgaa
aatgacattcctgagaatgaggaatctttatctaagactgtggttaatgaaaataaatca
actctggttcatccaaagaactcaagtaatgcagctgtgagaaggcctggaactagaaca
cttgtttttcgcaatcaccagctaaaaatggtgcacagtgccagctcagatgaagatgat
agttctcagattcatcagtcaagcaaaacaaaactaaccagtggaacaaagaaaggaaaa
gaaaaatccacccagcagcagaaggaagaacatctgatggaaattggacagactggctct
gctgatgtggacagtgcaggatgcaaaagaaagagtctgtcactgcagggcattgattgt
ggcaagtcaggtgtgctgaatgacatgtgtatcatgaggccatctaacaatgcaccccta
aaagctgactgcaaaaaagaaaatagcaggcagtcaaaacaagatgcactttgtgaggag
gctgatggtgatgggatgcttcccaagaatgctaatgaagaaaatatttacatactggat
gccacaaaagaaggaaatgtgggtcgttttctaaatcacagctgctgcccaaatctcttt
gcacaaagtgtgtttgtagaaactcacaacagaagttttccatgggtggcattcttcaca
aacagacatgtgaaagctggaaccgaactcacatgggattatggttatgaagctggaagc
atgccagagacagagatttcctgtcagtgcggagttcagaagtgcaggaaaaaaacctta
ggagggatgcgggatatcgccttttccatggagaaagccctcgggaaatggctgcccgac
ggtattccgcggcagtgcctggcacgggaatcgaacccgcgtatccgatccgtgaccccg
gcacgcccgaacgcgcgggggggccccgggcgcgcctcccttatcaggtgccggcgccgc
agcggcacgccttcccccaggcgcgcgggggctgcagccaatcagcggcgggcggctgcg
cgggggcggggcagcggcgggcgcaccgcgcatgctctgtgtcccggccgggcacgctca
cttccgcgcgggagagttgagggcgggggagggggcagagggagtgacagctcgcgcggg
ccgggccggggcgcgagcgagcgatccaatcctgcactgcgctggaaagaagaggagagc
agagcaggagctgaggcagtgggtttcaatagcatgctggaagtcaggggacttgggttc
ttttccttactcccctatggatatactaacaccaggatttttctggagcctgtaagaaca
ccagggactgtagactccacctttagccccttccttacaaaattcctagaactggatcct
ctgactgggcctgagcagggcttatgtatctgcatcgattccagttttactgctccaggt
gctttctggataatggcgaagatggtgagaagaacgtgtgcgttttgttcagaaggggag
gccggctctgtaatgtacattgccacagagagagatattgcagctcatcaggattgtctg
ttattttcctcaggatttgtggaatctgaagatcagaacccagataatctgggaataaga
tttgatgtggcatcagtgttaaaagagctcaggagaggaaagcggctggtgtgcaacttc
tgccgcaagaagggggccacggtgggctgcgaggagcgcgcgtgccgcaggagctaccac
ttcttctgcgcgctctgcgacgacgcagccgtggagaccgaccaagtcaacggcgtctac
cgagtgttctgcccaaaacatgacccagggaataggaccagtcactatgataaagctaat
aagaaaagaagacgtacattgacatctcccaccatcacagaagaaatgagtacagaagag
acagcagaagaaaaccatttacgaatactaaaaagaaaaaacaacaggcataaagttcga
atagactttgttaggaagtgcaaacaagctgggcttctggatgacatatttgaagaaatg
ctggacacacttcacctggctcaggaaaaactgatggatgacaacacttcagaaacagag
tatgaagagacagtgatggcactgtttgactgtggactgtttgaaaatatactgtcaaat
attcattcaggaacagaagaaaaaatccaggaacttctggaaaacaggaaaagactggat
cacaagattgagctgctgcaggacttaaaagcagtcattgctcctactccagagaacacg
gccagtacatccagtacgatgtctgaataa
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