KEGG   Corvus cornix (hooded crow): 104690040
Entry
104690040         CDS       T03546                                 
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccw03019]
    104690040 (ZC3H12C)
Messenger RNA biogenesis [BR:ccw03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     104690040 (ZC3H12C)
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6 UBA_N4BP1_C zf-CCCH_2 zf-CCCH_4
Other DBs
NCBI-GeneID: 104690040
NCBI-ProteinID: XP_010398856
LinkDB
Position
1:43901009..43946270
AA seq 857 aa
MGLKDHLGHDLGHLYVGSTGTQINAIVPWSMAEKPTMDKVNSRKEDVEKEASEETSGSSS
CDSEESTNSDNDSERLNNSASESHLLPKTHRQLCRSPCLEPHILKRNEILQDFRIEEAQI
VPKEVKKPPDVVKEYQTKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKTE
TDQTVSNANTSVMREASSIESQRSESPLQEDVTEDGDNLRPIVIDGSNVAMSHGNKEVFS
CRGIKLAVDWFLERGHKDVTVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRV
QGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMP
PDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGNQPQRSVADE
LRAMSRSTAAKTTSEGGLVKSNSVPCSTKSDGTSELKRAAPKRQSDPSIRTQVYQDLEEK
LPTKNKLETRSVPSLVSIPSSSAGKPQSTAPLTNGLPSGVHFPPQDQRPQGQYPTVMMAT
KNHGTPMPYDQYPKCESPVDIGYYSMLSAYSNLSVSGPRSPERRFSLDTDYRISSVASDC
SSEGSVSCGSSDSYVGYSDRSYMSSPDPQLEENLKCQHMHPHGRLNTQPFLQSYHEPLTR
VQSYSHEEPKHHHKSPIPYMAVHLQHPAVGARSSCPNDYSASQSSSHSKALHLGRALVST
RIDSISDSRLYENSPLRHRKPYAAQEGLGGWDRQSYGMDAYGYRQTYSLPSNPTQPCYEQ
FAFQSLPEQQDQPWRVPYCGIPQDPPRHQDTREKVYINLCNIFPPDLVRMVMKKNPHVTD
AQQLAAAILVEKSQLGY
NT seq 2574 nt   +upstreamnt  +downstreamnt
atgggcttgaaggatcatctggggcatgacttaggccacctttatgtggggagcactggc
acacaaataaatgcaattgtaccttggtcgatggcagagaagccaacgatggataaggtt
aattctaggaaagaagacgtagaaaaggaggcgtctgaagaaacttctggaagctccagc
tgtgactctgaagaaagcacaaattctgataatgattcagagagactgaataattctgca
tcggagtcacatttattgcctaagactcaccgacagctgtgccgatctccttgcttagag
cctcatatactaaaaagaaatgaaatcttacaagactttaggatagaagaggctcagata
gtacctaaggaagtcaaaaagcctcctgatgtggtgaaagaatatcaaaccaaactggag
tttgcacttaagttgggttactctgaagagcaggttcaacttgtactaaataaacttggt
actgatgctttaataaatgatattttgggagaacttgtcaaacttgggaataaaactgag
actgatcagactgtaagtaatgctaacactagtgtaatgcgtgaagcatcttccatagag
tctcagaggtcagagtctccactgcaggaggatgtgacagaggatggagacaacctgagg
ccaatagttattgatggcagcaatgttgcaatgagccacgggaacaaagaagtattttct
tgtcgaggaatcaaactggcagtagactggtttttggaaagaggccacaaggatgttact
gtgtttgtgccagcgtggaggaaagaacagtcgagaccagatgctcttataacagatcaa
gaaatcttacgtaaattagaaaaggagaagattcttgtgttcacaccatcccggcgtgtg
caagggagaagggtggtgtgctacgatgaccgattcatagtgaagttggcctttgagtca
gatggcatcattgtctctaatgataactacagggatctagctaatgaaaagccagaatgg
aagaagttcatagatgaacgcttgttgatgtattcatttgttaatgacaaatttatgcct
cctgatgatcctcttggtcgccatggtccaagtctggacaattttcttaggaagaagcct
attgtgccagaacataagaagcaaccgtgtccgtatgggaagaaatgtacctatggacac
aaatgcaaatactaccatccagaaagaggaaatcagcctcagcgatccgtagctgatgaa
cttcgtgccatgtctagaagcacagctgccaaaactacaagtgaaggaggactggtaaaa
agcaatagtgttccctgtagcactaaaagtgatggcacttcagagctgaagcgtgctgct
ccaaagaggcaatccgatcctagtataaggactcaagtctatcaagatttggaggaaaag
cttcccaccaaaaacaaattggaaaccaggtctgtaccttctttagttagtataccaagt
tcctctgctggaaaaccccaaagtactgcacctttaactaacggccttccatccggagtt
cacttcccacctcaggatcaaagaccacagggacagtatcctacagtgatgatggcaacc
aaaaatcatggaacaccaatgccttatgaccagtatccaaaatgtgagtctccggtggat
ataggctattattccatgctgagtgcatattcaaatctcagcgtatctggtccacgtagt
ccagaaaggcgcttctccttggacacagattataggattagctctgtagcttccgactgc
agcagcgaggggagcgtcagctgtggcagtagcgattcctacgtgggttacagcgatcgc
tcgtacatgagctcgcctgacccgcagctagaggagaacttgaagtgccaacatatgcac
ccccacggccgccttaacacccagcccttcctgcagagctaccacgagcctctcacacga
gtgcagagctacagtcacgaagaaccaaagcatcaccacaaatctcccattccgtacatg
gctgtgcatctgcagcatccagcagtcggggctcgttccagttgtccgaacgactactcc
gcatctcagagctcgtcccattcaaaggcgctgcatctggggagagcgctggtgtccacg
agaatagacagcatttcagactcccgtttgtatgaaaactctccgttaagacacagaaag
ccttacgctgcccaggaaggtctgggaggttgggacaggcagagttacgggatggatgcc
tacggctaccgccagacatactccttgcccagcaaccccacgcagccatgctacgagcag
tttgccttccaaagccttcccgagcagcaggaccagccctggcgcgtaccttactgtgga
atcccgcaagaccccccaaggcaccaagacacccgggagaaggtttacattaacctctgc
aacatcttcccccccgacctcgtgaggatggtgatgaagaagaaccctcacgtgacggac
gctcagcagctcgctgcagccatcttagtggagaaatctcagctaggttattga

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