Corvus cornix (hooded crow): 104690040
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Entry
104690040 CDS
T03546
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104690040 (ZC3H12C)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
104690040 (ZC3H12C)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
104690040
NCBI-ProteinID:
XP_010398856
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Position
1:43901009..43946270
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AA seq
857 aa
AA seq
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MGLKDHLGHDLGHLYVGSTGTQINAIVPWSMAEKPTMDKVNSRKEDVEKEASEETSGSSS
CDSEESTNSDNDSERLNNSASESHLLPKTHRQLCRSPCLEPHILKRNEILQDFRIEEAQI
VPKEVKKPPDVVKEYQTKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKTE
TDQTVSNANTSVMREASSIESQRSESPLQEDVTEDGDNLRPIVIDGSNVAMSHGNKEVFS
CRGIKLAVDWFLERGHKDVTVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRV
QGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMP
PDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGNQPQRSVADE
LRAMSRSTAAKTTSEGGLVKSNSVPCSTKSDGTSELKRAAPKRQSDPSIRTQVYQDLEEK
LPTKNKLETRSVPSLVSIPSSSAGKPQSTAPLTNGLPSGVHFPPQDQRPQGQYPTVMMAT
KNHGTPMPYDQYPKCESPVDIGYYSMLSAYSNLSVSGPRSPERRFSLDTDYRISSVASDC
SSEGSVSCGSSDSYVGYSDRSYMSSPDPQLEENLKCQHMHPHGRLNTQPFLQSYHEPLTR
VQSYSHEEPKHHHKSPIPYMAVHLQHPAVGARSSCPNDYSASQSSSHSKALHLGRALVST
RIDSISDSRLYENSPLRHRKPYAAQEGLGGWDRQSYGMDAYGYRQTYSLPSNPTQPCYEQ
FAFQSLPEQQDQPWRVPYCGIPQDPPRHQDTREKVYINLCNIFPPDLVRMVMKKNPHVTD
AQQLAAAILVEKSQLGY
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgaaggatcatctggggcatgacttaggccacctttatgtggggagcactggc
acacaaataaatgcaattgtaccttggtcgatggcagagaagccaacgatggataaggtt
aattctaggaaagaagacgtagaaaaggaggcgtctgaagaaacttctggaagctccagc
tgtgactctgaagaaagcacaaattctgataatgattcagagagactgaataattctgca
tcggagtcacatttattgcctaagactcaccgacagctgtgccgatctccttgcttagag
cctcatatactaaaaagaaatgaaatcttacaagactttaggatagaagaggctcagata
gtacctaaggaagtcaaaaagcctcctgatgtggtgaaagaatatcaaaccaaactggag
tttgcacttaagttgggttactctgaagagcaggttcaacttgtactaaataaacttggt
actgatgctttaataaatgatattttgggagaacttgtcaaacttgggaataaaactgag
actgatcagactgtaagtaatgctaacactagtgtaatgcgtgaagcatcttccatagag
tctcagaggtcagagtctccactgcaggaggatgtgacagaggatggagacaacctgagg
ccaatagttattgatggcagcaatgttgcaatgagccacgggaacaaagaagtattttct
tgtcgaggaatcaaactggcagtagactggtttttggaaagaggccacaaggatgttact
gtgtttgtgccagcgtggaggaaagaacagtcgagaccagatgctcttataacagatcaa
gaaatcttacgtaaattagaaaaggagaagattcttgtgttcacaccatcccggcgtgtg
caagggagaagggtggtgtgctacgatgaccgattcatagtgaagttggcctttgagtca
gatggcatcattgtctctaatgataactacagggatctagctaatgaaaagccagaatgg
aagaagttcatagatgaacgcttgttgatgtattcatttgttaatgacaaatttatgcct
cctgatgatcctcttggtcgccatggtccaagtctggacaattttcttaggaagaagcct
attgtgccagaacataagaagcaaccgtgtccgtatgggaagaaatgtacctatggacac
aaatgcaaatactaccatccagaaagaggaaatcagcctcagcgatccgtagctgatgaa
cttcgtgccatgtctagaagcacagctgccaaaactacaagtgaaggaggactggtaaaa
agcaatagtgttccctgtagcactaaaagtgatggcacttcagagctgaagcgtgctgct
ccaaagaggcaatccgatcctagtataaggactcaagtctatcaagatttggaggaaaag
cttcccaccaaaaacaaattggaaaccaggtctgtaccttctttagttagtataccaagt
tcctctgctggaaaaccccaaagtactgcacctttaactaacggccttccatccggagtt
cacttcccacctcaggatcaaagaccacagggacagtatcctacagtgatgatggcaacc
aaaaatcatggaacaccaatgccttatgaccagtatccaaaatgtgagtctccggtggat
ataggctattattccatgctgagtgcatattcaaatctcagcgtatctggtccacgtagt
ccagaaaggcgcttctccttggacacagattataggattagctctgtagcttccgactgc
agcagcgaggggagcgtcagctgtggcagtagcgattcctacgtgggttacagcgatcgc
tcgtacatgagctcgcctgacccgcagctagaggagaacttgaagtgccaacatatgcac
ccccacggccgccttaacacccagcccttcctgcagagctaccacgagcctctcacacga
gtgcagagctacagtcacgaagaaccaaagcatcaccacaaatctcccattccgtacatg
gctgtgcatctgcagcatccagcagtcggggctcgttccagttgtccgaacgactactcc
gcatctcagagctcgtcccattcaaaggcgctgcatctggggagagcgctggtgtccacg
agaatagacagcatttcagactcccgtttgtatgaaaactctccgttaagacacagaaag
ccttacgctgcccaggaaggtctgggaggttgggacaggcagagttacgggatggatgcc
tacggctaccgccagacatactccttgcccagcaaccccacgcagccatgctacgagcag
tttgccttccaaagccttcccgagcagcaggaccagccctggcgcgtaccttactgtgga
atcccgcaagaccccccaaggcaccaagacacccgggagaaggtttacattaacctctgc
aacatcttcccccccgacctcgtgaggatggtgatgaagaagaaccctcacgtgacggac
gctcagcagctcgctgcagccatcttagtggagaaatctcagctaggttattga
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