Corvus cornix (hooded crow): 104690072
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Entry
104690072 CDS
T03546
Symbol
CNTN5
Name
(RefSeq) contactin-5 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccw04515
]
104690072 (CNTN5)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccw00537
]
104690072 (CNTN5)
Cell adhesion molecules [BR:
ccw04515
]
Immunoglobulin superfamily
Contactins
104690072 (CNTN5)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccw00537
]
Others
104690072 (CNTN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_5
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_4
Pur_ac_phosph_N
Ig_6
C2-set
Motif
Other DBs
NCBI-GeneID:
104690072
NCBI-ProteinID:
XP_010398915
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All DBs
Position
1:39668106..40286732
Genome browser
AA seq
1099 aa
AA seq
DB search
MWLSWKLLLFLSLTGCLSEYSEAVPGVPTSYAAILRIKSGSSSLASFNSKNRPRLSSPSL
GSVSSPGWRGAAQHYHSPTNLYHFSETFKNDESVDYGPVFVQEPDDMIFPTDSEEKKVSL
NCQARGNPTPTYRWLRNGTEIDVESDYRFSLIEGSLIINNPSEIKDSGQYQCLTTNMFGS
ILSREAILQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPLHSPEIIYSWVFNEFPSFVAE
DSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPK
IEVHFPYTVTAARGTTVRMECFALGNPVPTISWRKVNGHNPSKARLRKSQAVLEIPNVQL
EDSGIYECKAENSRGRNVFRGQLQVYTYPHWMEKLNDTQLDSGDQLRWECRATGKPRPTY
RWLKNGVPLWPQSRIEMINGVLMIHSVNVSDAGMYQCLAENKYGTIYASAELKILASAPT
FPLNQMKKTIIVTKGQEVVIECKPQASPKPTITWKKGDKVLRENKRITILPHGSLRILNA
SKSDEGRYLCQGVNVFGSAEIVASVSVKEPTRIELTPKKIELTVGESIVLSCKALHDSTL
DVTFYWTHNGQPIDFEKEGGHFESIKAQASSADLMIRNILLMHAGRYGCRVQTAADTVSD
ETELLVRGPPGPPGVVIVEEITDTTATLSWSPGADNHSPISLYNLQARSPFSLGWQTVKT
VPDLISGDMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRVIRTNEAVPKTPPANVS
GRSGRRHELVIAWEPVSEEFQSGEGFGYIVAFRPNGTRGWKEKMVTSSDASKFIYRDESV
PPLTPFEVKVGVYNNKGDGPFSPIVVICSAEGEPTAAPIDVKATSLSVSEILVAWKHIKE
SLGRPQGFEVDYWKDMQQEEAAEKVKTEGNESSILLTGLEGNTLYHLTVRAYNAAGYGPP
STAVHAATKKSPPSQPPGNIMWIQDGSHVSLGWEPVRPLANESDVMGYKVLFRQEGQSNS
QVIETQKTSAVVLLPDVGVYIIEVCAVSEGGDGTASPQIRVPSFSGGKVTSAQSTLHVLS
TSSSSVTLLLALMVPSTSW
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgtcatggaaactcttgctgtttctgtcactgactggctgtctttcagaatat
tcagaagctgttcctggtgtccccacatcatatgctgctatcctaagaataaaatctggt
agttcatctttagcctcatttaattcaaagaacagaccacgattaagcagtccttcatta
ggaagtgtatcttcaccaggctggagaggagctgcacagcattatcactccccaacaaac
ctctaccacttttcagagaccttcaaaaatgatgaaagtgttgattatgggccagtgttt
gtacaagagccagatgatatgatttttccgactgattctgaggaaaagaaagtgtctctg
aattgtcaagcacgtggaaatcctactcccacatacagatggcttcgaaatggaactgaa
atcgacgttgaaagtgattatcgtttcagtttaatagaaggaagtctgatcatcaacaac
cccagtgaaattaaagattctggacagtatcaatgtttaactaccaacatgtttggcagt
attttaagcagagaggccattcttcagtttgcatatcttgggaattttagtggtcggaca
agaagtgctgtctctgtacgtgaaggtcaaggagttgttctgatgtgctcccctccactt
cattctccagagattatctatagctgggtattcaatgaattcccatcttttgtggcagaa
gacagcaggcgcttcatctctcaggagacaggcaatctctacatctccaaggtgcaaaca
tcagatgttggcagctacatatgcctggtaaaaaacacagtgacaaatgccagagttttg
agtcctcctacacctctgacactgagaaacgatggtgtgatgggagaatatgaaccaaaa
attgaagtccattttccttacacagttacagctgcaagaggaactactgtaaggatggag
tgttttgcacttggaaaccctgttccaacaatctcttggaggaaagttaatggtcataat
ccaagtaaagcccgtctgagaaaatcccaagctgtgcttgaaatacctaatgtgcagcta
gaggactcaggaatttatgaatgtaaggctgaaaactctcgtggaagaaatgtcttcaga
ggacagctacaagtatacacctacccacactggatggagaaacttaatgatacacaatta
gacagtggagatcagctccggtgggaatgcagggccacaggaaagccaaggcccacatat
cgctggctgaaaaatggagttcctctctggccacagagcagaattgagatgattaatggt
gttctgatgatccatagtgtgaatgtctcagatgctggaatgtatcagtgcttagcagaa
aataaatatggtacaatttatgccagtgccgagctgaagattttagcttcagctcccact
ttccccctcaatcaaatgaagaaaacaataattgttaccaagggccaagaagttgtcatt
gagtgcaagccacaagcctctccaaagccaactatcacttggaagaaaggagacaaagtg
ttaagggagaataagaggataactattcttccacatgggagcctgcgaatcctgaatgct
tccaagtctgatgaaggacggtatttatgccaaggtgtaaatgtatttggatctgcagaa
attgttgcatcagtatctgttaaagaacctacaagaatagagctgactcccaagaagatt
gagttaacagttggagagagcatcgtcctcagttgcaaggcccttcatgacagcacactg
gatgtcaccttctactggacacacaatggacagccaattgactttgagaaagaaggtgga
cacttcgaaagcatcaaggcacaagcctcctctgcagatttaatgatcaggaacatcctc
ctgatgcacgctgggagatatggttgcagggtccagaccgcagcagacaccgtgtcagat
gagacggagctgcttgttaggggtcctcctggtcccccaggggttgtaatagtggaggaa
attacagacacaacagcaacactctcctggagtcctggggcagacaatcacagccctatc
tccctctacaacctgcaagcacgcagtccattttctcttggctggcagaccgtaaaaaca
gttccagatctcataagtggtgacatggagtctgctatggctgtggaactgaacccttgg
gtggagtatgagttcagagtagtagcaaccaataaaattgggactggagacccaagtgca
ccatcgagagtgatcagaaccaatgaagcagttccaaagacacctccagctaatgtaagc
ggcagaagtggaaggcgacatgaattagtaatagcatgggagccagtgtcagaagagttt
cagagtggagaaggattcggatatattgtagccttcagacccaatggaacgcgtgggtgg
aaggaaaaaatggtgacatcttcagatgcttcaaaattcatctacagagatgaaagtgtg
ccacctctgactccttttgaggtgaaagttggtgtttacaacaacaaaggagatggtccc
ttcagccctattgtggtcatctgctcagctgaaggagaacccactgctgctcccatcgat
gtcaaagctacgagtttgtctgtatcagagattcttgttgcgtggaaacatattaaagaa
agtctaggaagaccacagggattcgaggttgattactggaaagacatgcagcaggaagaa
gcagcagaaaaggtcaaaacagagggaaatgagtcatccatcctcctgacaggattagaa
ggaaacacattatatcacctaacagtgagggcatacaatgctgcagggtatggaccacct
agcactgctgtgcatgcagcaaccaagaaatcccctcccagccaaccaccaggcaatatt
atgtggatacaggacggctcacatgtgtctcttgggtgggagccagtcagacctctagct
aatgaatctgatgtaatgggatacaaggtgttatttcggcaagagggccagagcaatagc
caagttatagaaacacagaaaacctctgcggtggtacttcttcctgatgttggtgtctac
atcatcgaggtctgtgcagtcagtgaaggaggggatgggactgcaagtccccagatcaga
gttccatctttttcaggagggaaagtaacaagtgctcagtccaccttacatgtgttgtct
acttcctcatcctctgtaacattgcttttagcactgatggtaccttcgacttcatggtga
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integrated database retrieval system
