Corvus cornix (hooded crow): 104690103
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Entry
104690103 CDS
T03546
Symbol
DDX10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccw03009
]
104690103 (DDX10)
Enzymes [BR:
ccw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104690103 (DDX10)
Ribosome biogenesis [BR:
ccw03009
]
Eukaryotic type
90S particles
Helicases
104690103 (DDX10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
104690103
NCBI-ProteinID:
XP_039420518
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All DBs
Position
1:43423307..43584620
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AA seq
873 aa
AA seq
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MGRPGGGGATAAMDPVRSFERWKKKYTRRTKRLRLQRKERKRPEWQVERENIARLVQRYP
EINASEIQRFSDFPLSKKTLKGLQEAQYRVVTEIQRQTIGLALQGKDVLGAAKTGSGKTL
AFIVPALELLYRQQWTSADGLGVLIISPTRELAYQTFKVLRKVGKNHEFSAGLIIGGKDL
KEESERIHHINMLICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIE
NLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLDQNYVVCELQQKV
NMLYSFLRTHLKKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRMEVYTCF
VRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEALLVLLP
SEEKGMVEQLAQRKVPISEIKINPEKLTDIQKRMQAFLAQDQDLKEKAQRCFVSYLRSVY
LMKNKDVFDVFKLPLAEYALSLGLAMAPRVRFLQRVRKQLEAANGTDHLEETEQNENTLT
LVNEETVEKCGTNLSGKTSVNRTKEKQRRKETEECSASSGSAEESGESEDELKELSEEEE
EKEVHVPSRVPNSDSMQFFEDDDDDDDDNDTEGLDLLTVKQRDVFGVEAKDNPAPITSKS
KMKKKATKTQEAKKILKKKFKVNTKIVFTEDGELVQQWPPVQKSNLAQADEEDDASGINL
DKAKEILREEDKFDKEEYRKKVKEKHREKRLKEKAARREARNKNAQVEEETVAFLAHSGS
EEEFDPSTLPDPDKYKDSDEEQDSESEDSYSELEEKSGRRKRSNSNNATAEEMPLKRKKV
QFSQEEDPYLPLDTGLSLAEDEELVLHLLNSHS
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggccggcccggcggcggcggggccacggcggccatggaccccgtgcgcagcttcgag
cggtggaagaagaaatacactcggcggacgaagaggctgcggctgcagcgcaaggagagg
aagcggcccgagtggcaggtggagcgggagaacatcgctcgcctggtgcagcgctacccc
gagataaatgcaagtgaaatccaaagattttcagattttccgttgtcaaagaaaaccctt
aaaggattgcaagaagctcagtatcgtgtggtaacagagatacagaggcaaaccataggt
ttggctttacaaggtaaagatgtacttggagctgcaaagactggatcaggcaaaaccttg
gcctttattgttccagctttggaactcctctatcgccagcagtggacttcagctgatggc
ctgggggttttgataatatcgcctacgcgggagctggcatatcaaaccttcaaggttctg
cggaaagtggggaagaaccatgagttctcagctggccttatcattggaggaaaggatctg
aaagaagagtctgaaagaatccaccacataaatatgctaatttgcactccaggacggctt
ttacaacacatggatgaaacttcatatttctatgcatctgatctgcaaatgttgattctt
gatgaagctgacagaattctagacatggggtttgctgatacaatgaatgcaatcatagaa
aacctgcctaagaaacgccagactctgcttttttctgcaacacaaacaaaatccgtgaag
gatcttgcacggctgagtctgaaagatcctgaatatgtttgggttcatgagaaagccaaa
ttcagtaccccagcaactttggatcagaactatgttgtctgtgagctccagcaaaaagta
aacatgttatactctttcctgagaactcatttgaaaaagaagagcattgtgttttttgca
agctgtaaagaggtccaatatctattcagagtgttctgtaagcttcagcctggtcttcct
gtcctggcactccatggcaagcagcagcagatgaagagaatggaagtctacacttgtttt
gttcggaaaaaggcagcagtgcttttcgctacagatattgcagctcgtggcctggatttt
ccagcagtgaattgggtcattcagtttgattgtccagaagatgcaaacacgtacatccac
agagtgggaagaacagccaggtacaaagaaggtggtgaagctttgttagtattgcttcct
tcagaagaaaaaggcatggtggaacagctggcacagaggaaagtacctatcagtgaaatc
aaaattaatcctgaaaaacttacagacatccaaaagaggatgcaagctttcttagctcaa
gatcaggacttaaaagagaaagctcaaaggtgttttgtatcctacttgcgttcagtgtac
ttaatgaagaacaaggatgtattcgatgttttcaaattgcctctagcagaatatgcccta
tctcttggtcttgcaatggcacctcgtgtgagatttcttcaaagagttcggaaacagctg
gaggcagccaatgggacagaccacttggaggagacagagcaaaatgaaaataccctcacc
ttggtaaacgaggaaacagtggagaagtgtggaactaatctcagtggaaaaacatctgtt
aacagaacaaaggaaaagcagagaagaaaagaaacggaggaatgttctgcttccagtgga
agtgctgaggagagtggtgagtctgaggatgaattgaaagagctgtctgaggaggaggag
gaaaaagaagttcatgtacctagcagggtaccaaattcggactccatgcagttctttgaa
gatgatgatgacgatgatgatgacaacgatactgaaggtcttgatttgctgacagtgaaa
caacgggatgtttttggtgtggaagctaaagacaatccagcaccgatcacgtcaaaatca
aagatgaagaaaaaagcaactaagacccaagaagccaaaaaaatcttgaagaagaaattt
aaagttaacacaaaaatagtttttacagaagatggagagttagtgcagcagtggccacct
gtgcaaaaatccaatttggcgcaagcagatgaggaagatgatgccagtggtatcaaccta
gataaagcgaaagaaatactgcgtgaagaagacaaattcgacaaagaagaatacaggaag
aaagtaaaggaaaaacatagggagaagaggctgaaagaaaaagcagcaaggagagaagcc
aggaataagaacgcacaggttgaagaggaaacagtggcctttcttgctcacagtggaagt
gaggaagagtttgatccaagcactctcccagatcctgataaatataaagactctgatgaa
gaacaggattcagaaagtgaagacagctatagtgaacttgaggagaagagtggaagaagg
aagaggagcaatagcaacaatgccacagcagaagaaatgccactgaaaagaaagaaggtg
caattcagccaagaggaggatccttatttgccattagatactgggctttctctggcagag
gatgaagagcttgtactgcatctgctcaacagtcacagctaa
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