Corvus cornix (hooded crow): 104690165
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Entry
104690165 CDS
T03546
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X5
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104690165 (JMJD1C)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
104690165 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
zf-C5HC2
C1_2
FYVE
Motif
Other DBs
NCBI-GeneID:
104690165
NCBI-ProteinID:
XP_019142095
LinkDB
All DBs
Position
6:complement(30420474..30579307)
Genome browser
AA seq
2255 aa
AA seq
DB search
MNSQTAAPKQNSHQHQQQRNIRPNKRKGSDSSMPDEEKMKDERYDYIGRGDMFLSFTENP
KTKNKHFLSKRRKPEEDEKKLNMKRLRTDNISDYSESSDSEISNKRLTDSSSEQNSENEL
KSKNSSKINGEERKSQTTEGVEQTLTDRRSPWDEVQQDKNHEETERLKSSVLDQQEKSSL
HAAEQPALHEQNAKDPHVQECNAEKHHTVELKNEQFLPRPPTPKCVVDVTNKNNSEKENQ
DNAASTFGLQAVQKIESHSSDLKQQFTNANFLEARKQEADQGWVSSVGKTDLIQPGVVKT
LPVNEHLNSEKVQYGSFMSSLNVASVAEESKLRKQSPVPDSVKSKSSASVDHPKTKSPDV
KPKFTQSSDTVKSKVSSQNSHATGLTRSANKTDHDLPRSSFHPVPARVSALEATKSPLII
DKNEHFTVYRDPSLIGQETGTNHISPYLHQHNYPLHSSSHRTCLNPNAHHPALTGSSHLL
AGSSAQAPLSAINTHPLSSASHHSVHHPHLLPAVLPGVPAASLLGAHPRLETAHASSLSH
LALAHQQQQQMLQHQSPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVH
PETPVNAEASLRRNTPSPWLHQPTPVTSADSLGLLSHIPVRPSSADPLRPLKLATHSSPP
LSKSIVDHRKEELERKTFVDPLRSVTTAPVKSELEQSRTQAAKESHMHRHYADPMLNQLP
RPPQETGERLSKYKEEHRRILQESIEVAPFTAKIKALEGERENYSRVTSLSSSPKSHSVK
YDKDAERSVSELYKMKHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEASGAYVDKQANC
PSTAASPQALPSYISSLSKPPPLIKHQPESEGSTSKIPEQLPQSVQSHSVNSFRSDSRSP
TQLSVSSSNTLRSMPALHRAPVFHPPVHQSLEKKESSYSSLSPPTLTPVQPVNAGGGKIQ
ELQKPPTLVPEPKEAQTVYKGTSEQNLSEMWKSNNAPNNEKVDWHSERMSGKSQSATASV
IVRPPSSTKYENVPVMQSASKDRVSERSSAVTNQADCLKTAEARETGRVILPNMNSDSAR
TQYEKKFPAVSQGSIPRAVTPTTTIICSTKTDVTTSAATTTSVSSRGSSEVTYSVSSAVS
CAPLECAAPRAAGQAAAQPQECKVSTSAPVASAVGSTGSAAQPSSGFSTSTDFVHLKKHK
AALAAAQFKSSNTTETESNSVKNQTFSTSLSLDSAIVCNTINKANSVGSGQTSQTSQPNY
HTKLKKAWLTRHSEEDKNTNKKENSGNSVSEIIKPCTVNLIASTSNDLQNNIDSKILADK
FVKEDKHPRRKGKRTYESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKKKGDTEE
EVKPNGVLSRSAKEKSKLKLQSGSNSTGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIG
PNLQKCRECRLIRSKKGEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEALS
LWTHENYEDDELDLETSKYILDIIGDKFCQLVTSEKTAMSWVKKDAKIAWKRAVRGVREM
CDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPT
QIIPGSVLTDLLDAMHNIREKFEMKSHCQCTTKQSTQAAKLPAMNGVSQVLQNVLNHSNK
ISLCMPESQQQNIPQKSETNGNTSPRSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKK
ENKECPSGKQSKEEKDQDNLESPNCKSSPPASQNNEQGSTLRDLLTTTAGKLRLGSTDAG
IAFAPVYSTGAASGKSGRTMPNILDDIIASVVENKIPPNRAPKINVKSEIKDEPKDDKKC
IQDDCSKRYSDIQYSWICDKHVLWLRDHKNSNNWKLFKECWKQGRPVLVSGMHKKMNFSL
WKAESISLDFGNQQADILNCKDSIISNTNVKEFWDGFEDVSKRQKVKNGETALLKLKDWP
SGEDFKAMMPARYDDLLKSLPLPEYCSPEGKLNLASHLPGFFVRPDLGPRLCSAYGVAAT
KDHDIGTTNLHIEVSDVVNILVYVGIAKGNGVLSKSGVLKKLEEEDLDDLLRKRLKDSSE
LPGALWHIYAGKDADKIREFLQKIAKEQGLEVLPEHDPIRDQSWYVNKKLRQRLFEEYGV
KTCTVIQFLGDAIILPAGALHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLSKEEIN
YDDKLQVKNILYHAVKEMVRALKIHEGEMEDMDEN
NT seq
6768 nt
NT seq
+upstream
nt +downstream
nt
atgaattcccaaactgcagcaccaaaacagaattctcaccagcaccagcaacagaggaat
attcggccaaataagaggaaaggctctgacagcagcatgcctgatgaagagaagatgaaa
gatgaaagatatgattatataggtcgaggagacatgtttttatcttttacagaaaacccc
aaaaccaaaaataaacactttcttagtaaaagaagaaaacctgaagaggatgaaaaaaaa
ttaaatatgaagagactgcggacagacaatatctcagattattctgagagcagtgactcg
gaaatttcaaataaaagattaacagattcatcctcagagcaaaattcagaaaatgagtta
aaaagcaagaactcttcaaagataaatggagaagaaagaaaatcccaaactactgaggga
gtagaacagacactaacagatagacggtctccatgggatgaagtacagcaggataaaaac
catgaagagactgaaagactgaagtcgtcagtcttggatcagcaggaaaaatcttcactc
catgcagcagagcagccagcacttcatgagcagaatgccaaggatccacatgttcaagag
tgtaatgcagaaaaacatcatactgtggagttaaagaatgagcagtttttacccagacca
cctactccgaaatgtgttgttgacgttactaataaaaacaactctgaaaaggagaaccag
gataatgctgcaagtacctttggtttgcaagcagttcagaaaatagaatctcacagcagt
gatttaaagcagcaatttacaaatgcaaatttccttgaagcaaggaaacaggaagctgat
caaggttgggttagcagtgttggtaaaacggatttgatacaacctggggttgtaaaaaca
ttaccagtaaatgaacacttaaattctgaaaaagtgcagtatggctcatttatgtcttcg
ttaaatgtagcttctgtagcagaagagagtaaactgcgtaaacaaagtccagtccccgat
tctgtgaagtcaaaatctagtgcttcagttgatcatcctaaaacaaagtcacctgatgtt
aagcctaaattcacccaatcttctgatactgtgaagtctaaggttagttcccaaaacagt
catgctactggattaacaaggtcagccaataaaactgatcatgatttgcctaggtctagt
tttcatccagttccagctagagttagtgctctagaagctactaagagtcctcttatcatt
gacaagaatgaacatttcacagtatacagggaccccagtctgattggacaagaaacagga
actaatcacatttcaccttacttgcatcagcataattatcctctgcattcctcatcccac
cgaacctgtttaaatccaaacgctcatcatcctgcattaactggttcatcccatctgctc
gctgggtcttcagctcaggctcccttgtccgctattaacactcacccccttagtagcgca
tctcaccattctgttcatcaccctcatctacttcccgcagtgttgcccggagtgcctgct
gcctccctgctgggtgcccacccgcgactagagactgctcatgctagcagcttaagccat
ttggcattagcacaccagcagcagcaacagatgttacaacaccagtctccacatcttctc
ggacaagctcatccttctgcttcctataatcagctagggctttatccaattatttggcag
tatccaaatggaacacatgcttactcaggactcggtctgccctcctccaaatgggtccac
ccagaaactcctgttaacgcagaggcttccttgagaaggaatactcccagcccctggtta
catcagcccaccccagtgacctcagctgacagccttggtttactgagtcacattcctgtg
cgaccgtccagcgcagatccccttcggcctcttaaactggctacgcattccagcccacca
ttgtccaaaagtattgtagaccatcgcaaagaagaactggagagaaaaacgtttgttgac
cctttgcgttctgttaccactgcgccagtgaagagtgagctagagcagagcagaacacag
gcagcaaaggagagccatatgcacagacattatgcagatccaatgttgaaccagctgcca
aggccaccacaggagactggggaacgactgagcaaatacaaagaagaacacagacggata
ctccaagaaagtattgaagttgctccttttacagctaaaataaaggcactggagggagag
agagagaactactccagggtaacatccttatcttcaagtcccaaaagccattcagtaaaa
tacgacaaagacgctgaacgttctgtgtcagaactgtataaaatgaaacattcagttccg
cagagtttgccacagagtaactatttcactaccctgtctaacagtgtagtaaatgaacca
ccaagatcgtacccatcaaaggaagcttcaggtgcatatgttgataagcaagctaattgt
ccttcaacagcagctagtccccaggctctcccctcctacatttcttccctttcaaaacct
ccacctttaattaagcaccaaccagagagcgaaggctctacaagcaagatacctgagcag
cttccacagtcggtgcagtctcactctgtaaattctttcagaagtgacagcaggagccct
actcagttgtcagtctcatcttcaaatacactccggagtatgcctgccttgcatagggcc
cctgtgtttcaccctcctgtgcaccagagcctggagaagaaggagagcagctatagcagc
ctttcacctccaactctaacccccgttcaaccagttaatgctggtggtggcaaaatacag
gagttgcagaaaccgccaactttagtacctgagcccaaggaagcccagactgtttacaag
ggcacttctgagcagaatttatcagaaatgtggaagtctaataatgccccaaataatgaa
aaagtagattggcacagtgaaagaatgagtggaaagtcgcagtccgctacagcatctgtt
attgtgcgtcctccttctagcacaaaatacgagaatgtaccagtaatgcagtctgcttcc
aaagatcgagttagtgagagatcttcagctgtgacaaatcaagcagattgcctgaaaaca
gcggaagccagggagactggaagagtcatcctgccaaatatgaactcagacagtgctcgc
acacagtatgaaaagaaatttccagctgtctcgcaaggcagcattcctcgtgctgtcacc
cctaccacaactatcatctgcagcaccaaaacggatgtcaccacatcagcagcaacgacg
accagcgtgtcgagccgcgggagctctgaagtgacctactcagtgtcgagcgcagtatcc
tgcgcgccgctggagtgcgcggccccgagagcggccggccaggcggcagcacagccccag
gagtgcaaggtcagcacttcagctccggttgcatccgctgttggcagcacaggcagcgct
gctcagcccagctcgggattctccacctctaccgactttgtccatttgaagaagcacaag
gcagcgttggctgcagctcagtttaaaagtagtaacaccactgagaccgagtccaactct
gtgaaaaatcagacattttcaacctctctctccctagacagtgctatcgtctgtaataca
ataaacaaagcgaactctgtaggcagtgggcagacttcccagacgagtcagccaaactac
cacactaaactgaaaaaggcttggctaacaaggcattcagaggaagataaaaacactaat
aaaaaagagaattcagggaacagtgtttcagaaattattaagccgtgtactgtcaattta
atagcttctacatcaaatgatttgcaaaataacatagatagcaaaatcttggcagataag
tttgtgaaggaagataagcacccaaggagaaaaggaaaacgaacttacgagtctggctct
gaaagtggtgactctgatgaaagtgagagcaagtcagagcaaaggactaaacggcagccc
aagccaacttacaaaaagaaacaaaatgatttgcagaaaaaaaagggtgataccgaggaa
gaagtgaaaccaaatggtgttcttagcaggagcgccaaagaaaaaagcaagctgaagtta
cagagcggcagtaacagcactggtatacctcgctcagtgttaaaagattggcgcaaagta
aagaagctgaagcaaacgggagagtcctttttgcaggatgattcttgttctgaaatagga
ccaaatttgcaaaaatgcagagaatgtaggttaataagaagtaagaagggagaagaacca
actcactcaccagtgttttgtagattttactactttcggcggttatcttttagtaagaat
ggagtggttaggatagatggtttctcctctcctgatcaatatgatgatgaagcactgagt
ttatggacacatgaaaactatgaagatgatgaactggacctagaaacttctaaatacatt
ctagatatcataggggataaattttgtcagttggtaacgtctgagaaaacagccatgtcc
tgggtgaaaaaagacgccaaaattgcatggaagagagcagtgagaggagtccgtgagatg
tgtgatgcatgtgaagccacattatttaacattcattgggtctgccaaaaatgtggattt
gtggtctgcctagattgttacaaagcaaaggaaaggaaaagttctagagataaggagttg
tatgcctggatgaagtgtgtgaagggacagcctcatgatcacaagcacctgatgccaaca
cagattattccaggctctgttttgacagatcttttagatgctatgcacaacattagagaa
aaatttgaaatgaaatcccattgtcagtgcaccacaaagcagagcacacaagctgccaag
ctccctgcgatgaatggtgtgtctcaggttttgcagaatgtccttaaccacagtaataaa
atttctctgtgcatgcctgagtctcaacagcagaatattcctcaaaagtccgagacaaat
ggtaacacaagtccaaggagtgatgtgagcacagacagcaagttaacaccacctgaatcc
cagtccccactgcattggttggctgatcttgcagagcaaaaagccagagaagaaaagaaa
gagaacaaagaatgtccgtctggaaaacaatcgaaggaagagaaggaccaggataatttg
gaatccccaaactgtaaaagctcccctcctgcatcccagaacaatgagcagggctcaacc
ttacgagatctgttaactacaacagcaggcaaactgcgtctgggttctacagatgctggc
attgcttttgctccagtgtactctacaggagcagcaagtggcaagagtggaaggactatg
ccgaacattcttgacgacataattgcttcagtagtagaaaacaagattccaccaaataga
gcaccaaagataaatgtaaaatctgaaataaaagatgagccaaaggatgataaaaaatgt
attcaggatgactgcagtaaacggtacagtgatatccagtattcatggatctgtgataag
catgttctgtggctcagagaccataaaaacagcaacaattggaagctcttcaaagagtgc
tggaagcaaggaaggcctgttttggtgtctggtatgcataagaaaatgaacttcagcctg
tggaaagctgagtcaatcagtctggattttggaaaccagcaagctgatatcttgaattgc
aaggacagtatcatttcaaacaccaatgtcaaggagttctgggatggttttgaagatgtt
tcaaaacggcagaaagtaaaaaatggagaaacagctctactaaaactgaaagactggcct
tctggggaagatttcaaggctatgatgccagcaagatatgatgacttactaaaaagttta
cccttgcctgaatattgtagtccagaaggaaaactaaacttggcttctcatctgccagga
ttttttgtccgtccagatttgggacccagactgtgcagtgcatatggtgtggctgctact
aaagaccatgacataggaaccacaaatctccatatcgaagtttctgatgtcgtgaacatc
cttgtttacgttggcatagccaaaggaaatggagtactttccaaatcaggagttttgaag
aagttggaggaggaagatttggatgaccttttaaggaagcggttgaaagactcaagtgaa
ttacctggtgctttatggcacatttatgctggcaaagatgctgacaagataagagagttt
ctgcaaaagatagcaaaggagcaaggcctagaagttttaccagagcatgatccaatccgt
gatcagagttggtatgtgaacaaaaaacttcgccaaagactttttgaagaatatggagta
aaaacctgcacagttattcagttccttggtgatgctattattctaccagcaggagcactt
catcaggtgcaaaattttcacagctgcgttcaagtaactgaagactttgtgtctccagaa
catcttgtacagtcatttcacttaacgcaggagctgaggctgtcaaaggaagaaatcaat
tacgatgataaactgcaggttaaaaatatcttgtatcacgcagttaaagaaatggtgaga
gctttgaagattcacgaaggtgaaatggaagatatggatgagaactga
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integrated database retrieval system
