Corvus cornix (hooded crow): 104690186
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Entry
104690186 CDS
T03546
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104690186 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
104690186 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
104690186 (LDB3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
zf-C3HC4_3
PDZ_2
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
104690186
NCBI-ProteinID:
XP_019142193
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All DBs
Position
6:complement(27270783..27386930)
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AA seq
753 aa
AA seq
DB search
MAYSVTLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQMNQGDLVVAIDGVNTDSM
THLEAQNKIKSASHNLSLTLQKSKRPVPVSTTAPRIDSPRAVIPHQKEPAWEINGNRTTF
SPLTNTATGPMGSVLATNGTFSGYLNQQEISFSNSSSYLRTTTVRSSMSSQSVTPDISPA
KSTLGSKASPALAGGSSPAHQLSPARQYNNPIGLYSAETLREMAEMHKLSLNRRASEGGL
PRGALPIKDTHVDSASPVYQAVLKTQNKPEDESEDWSRRSANLQSKSFRILAQMTGTEYM
QDPDEEALRRSRDKEKVAAASENRPTGTTHVPQYVTSSIWHPPKSSTRDANTANAQPVAS
KGSVWLGAGTSQGEASFGQKTPLASSSNRRVLAAPSSLSQPKPFHAPKNMSLAASTISSA
ISSQSSFNRHSSTSISYQSKQRNTTQSYTPMPVSGSYSESPAPSAASKMRVVTTASIKPS
VYQPAPAPVHSYTPANTEPASRPPWVTDDSFSQKFAPGKSTTTVTKHILPRGAPVPPPAS
ISAYPSPVSTSSQPPALARGTVQRAERFPASSRTPLCGHCNSIIRGPFLVAMGRSWHPEE
FNCAYCKTSLADMCFVEEQNSVYCERCYEQFFAPTCARCRTKIMGEVMHALKQTWHTSCF
VCAACKKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDYPVEAGDKFIEALGHTWHDTC
FICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcttacagtgtgactctgaatggacctggaccgtggggcttccgactgcaagggggc
aaggacttcaacatgcccttgaccatctccagaatcacccctggcagcaaggcagcacag
tcacagatgaaccagggggaccttgtcgtggccattgatggagtcaacactgacagcatg
acccacctggaggcccagaacaagatcaaatcagccagccacaacctgagcctcactctt
cagaaatctaaacgtccagtgccagtttcaaccacagctcccagaattgactctcccagg
gctgtaattccccatcagaaggaacctgcttgggaaatcaatggcaacagaacaaccttc
agccctctaactaacacggcgactgggcctatgggtagtgttttagcaaccaatggaaca
ttttcaggctacctcaaccagcaagagatcagcttttcaaatagctcttcctacctaagg
actaccacagttagatcttccatgtcctctcagtctgtgactcctgatatttcacctgcc
aagagcactctaggttccaaagcaagccctgctttggctggtggcagtagccctgcacac
cagctgagccctgcgaggcagtataacaaccccattggcctttactcggcagagaccctg
agggaaatggctgagatgcataaattgagtctcaaccgaagggcttcggaaggtggactt
cctagaggtgccctccctattaaggatactcacgtggacagtgcctctccggtgtatcag
gctgtgcttaaaactcagaacaagcctgaggatgagagcgaggactggagccgccgctct
gccaacctgcagtccaagtcctttcgtatccttgcccagatgactggaactgagtacatg
caagatccagatgaagaagccctgaggaggtcaagagacaaggaaaaggttgcagcagca
tcagaaaacaggcctacaggtaccacgcatgtgccacagtatgtgacctcgagtatttgg
catcctcctaaatcatccaccagggatgccaacactgccaatgctcagccagtggcctcc
aaggggtctgtgtggcttggagcgggtacaagccagggggaggccagttttggccagaaa
acccctcttgcttcatccagtaaccgaagagttcttgcagcccccagctctctttcccag
cctaagcctttccatgcgcccaagaacatgtcattagcagcttccactatttcatctgct
atctcatctcagtctagtttcaaccggcattcttccacctccatcagctaccagtcaaag
cagagaaacacaacccagtcatatacaccaatgccagtttctggaagctacagtgaaagt
cctgctccttctgctgcttcaaaaatgagagttgttactactgccagcataaagccctct
gtctaccagccagcgccagcaccagttcattcctacacccctgccaacacggagcctgcg
agtcgccctccctgggtaacagatgactccttttcccagaaatttgcacctggaaaatcc
accaccactgtcacaaagcacatcctaccaaggggtgctccagtgccacctcctgcctca
atttctgcttacccgtctccagtttcaacttcttcccagccccctgcattagcccgggga
acagttcagagggcggagcgttttccagccagcagccgaacccccctctgtgggcactgt
aacagcatcattcgaggtcctttcctggtagccatgggtcgctcttggcacccagaagaa
ttcaattgtgcttattgcaagacatccttggctgatatgtgctttgtggaggagcagaat
agtgtgtactgtgagcgctgctatgaacagttctttgcaccaacctgtgcccgatgccgc
actaagattatgggggaagtgatgcatgccctaaaacagacttggcacacaagttgcttt
gtctgtgctgcttgtaagaagccatttgggaatagcctgttccacatggaggacggggaa
ccttactgtgagaaagattatattgctttgttcagcacaaaatgtcatggctgtgattat
cctgttgaagctggagataaattcattgaagctcttggacacacttggcatgacacctgc
ttcatttgtgctgtatgccacgtgaatttggaaggtcagccattctattccaagaaggat
aagccactgtgcaagaagcatgcccatgccatcaatgtttaa
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