Corvus cornix (hooded crow): 104690230
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Entry
104690230 CDS
T03546
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccw03009
]
104690230
03036 Chromosome and associated proteins [BR:
ccw03036
]
104690230
Enzymes [BR:
ccw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104690230
Ribosome biogenesis [BR:
ccw03009
]
Eukaryotic type
Pre-60S particles
Helicases
104690230
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104690230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
104690230
NCBI-ProteinID:
XP_039410418
LinkDB
All DBs
Position
6:32187080..32199681
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AA seq
861 aa
AA seq
DB search
MLEGLSNVGLLHTAEQARICGQQGEPHEGKSAKGGLLSGPRGEGREGAHGGGGAGGKGRR
GVAAEGAGRGRSGCMGTVWGRAARLGLPAVRAALAPASGGGRRLGWLCGAGAGPSVLLSA
ALPCGPALPPHFLRAGAGRASWGRRAETGPDTGSSAAAAYLPGEHPAAMPAAEPEHSPAE
PQAPAAAESVRRGRRRKAKQEETPEKKVKRQVKAKRRGKAEAEQAQPEESGLGDGDFEPP
VPKKTKKIKEKSNGLVGKSDASQHAVESSSVVSDSVTSPAAGEQDSGAEELTEEAKEGAF
SNFLLSQNTINLLTARGVKYLFPVQVKTFQPIYDGKDVIAQARTGTGKTLSFALPLIEKL
QSVSQDGRRGRAPKVLVLVPTRELATQVAKDFKNLTRKLSIACFYGGAPYKEQLDLLKSG
IDVLVGTPGRIKDHIQNSKLELSSVKHVVLDEVDHMLDMGFAEQVEEILGSSYKKGSENN
PQTLLFSATCPRWVYDVAKKYMRDEYEQIDLIGRKTQRTATTVEHLAIQCRSSQRAGVLG
DIIQVYSGSRGRTIVFCETKREANELAMNASLKQDAQSLHGDIPQKQREITLKGFRNGVF
EVLIATNVAARGLDIPEVDLVIQCSPPKDVDSYIHRSGRTGRAGRTGICICLFQRREEDL
LKQVEHKAGITFKRVGVPSATDVIKASSSDAKKLLEAVPPSAVDYFRKSAEELIDEKGAV
AALAAALAHISGAAHIQQRSLLNSTAGFVTMVLKCSIEMHTMGYAWRGLKEQLGEEVDNK
VSAMRFLKGKMGVCFDIPVDELSNIQEQWKDTRRWQLSVASELPELEEYPQEAGRGFSKF
GNSRQGDFKRKSWFKSGNRGL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaggtctctcgaatgttggcttgttgcacaccgcggaacaagcccggatttgt
gggcaacaaggggagccccatgaggggaagtccgcgaaaggaggtctgctaagcggacca
cgaggcgagggccgtgagggagctcacggtggcggaggagctggcggaaagggccggcgg
ggcgttgcggcggaaggggcgggccgagggcgcagcggctgcatggggaccgtgtggggc
cgggcagcgcggctggggctccctgcggtgcgggcggcgctggcccccgcgagcggcggc
gggcggcggctgggctggctgtgcggcgccggggcgggcccgtcggtgctgctgtcggca
gcgctgccctgcggaccggccctcccgcctcacttcctgcgcgccggggcggggcgcgcg
tcctggggccgccgcgccgagaccggccccgacactggcagcagcgccgcggccgcgtac
cttcccggggagcatccggcagccatgcccgccgccgagcccgagcacagccccgccgag
ccccaggcgccggccgccgcagagtcggtgcgccgcggacgccgcagaaaggccaagcag
gaggagacgccggagaagaaggtgaagcggcaggtgaaagcgaagcggcgcggtaaggcc
gaggccgagcaggcgcagcccgaggagagcgggttgggggacggcgatttcgagcccccc
gtgcccaagaagacgaaaaagatcaaggagaagagcaacggtttggtaggaaagagcgac
gcgtcccagcacgcggtggaatcttcctccgttgtgagcgacagcgtgacatccccagct
gccggagagcaggacagcggcgccgaggagttgacagaagaagcaaaagaaggcgccttc
tctaattttctgctctcacaaaacactatcaaccttctcacagctcgaggtgtaaaatac
ctgttccctgtgcaagtgaagactttccaacccatatatgacggcaaagatgtaattgct
caagctcgaacaggaactgggaaaaccctttcttttgctcttccactgattgaaaaactt
cagagtgtctcgcaggatgggagaagaggccgtgcaccaaaagtgctggttcttgttcca
accagggaactggccactcaggtagccaaagacttcaagaatctcacaaggaaactgtca
attgcttgtttttatggaggagctccatataaagaacagcttgatctccttaaaagtggc
atcgatgttctagtgggaactcctggacggatcaaagaccacattcagaatagcaagctg
gaactttccagtgtgaagcatgttgttttggatgaagtggatcacatgttagacatgggc
tttgcagaacaagtggaagaaatcttgggatcatcctataagaaaggctccgagaacaac
ccgcagacactgctgttttctgcaacttgtccacgatgggtttatgatgtagcaaaaaaa
tacatgagagatgagtacgaacagatcgacctgattggaaggaagactcaaaggacagcc
acaactgtggaacacttggctatacagtgtcgctcatctcagagagcaggagttcttggg
gacatcattcaggtctacagtggcagccgtgggcgaaccattgtcttttgtgagaccaaa
agggaagcaaatgagttggcaatgaatgcttcactcaaacaggatgcccagtccttgcat
ggtgacattccacagaaacagagggaaattacattaaaaggcttcagaaatggtgtgttt
gaggttctgattgcaacaaatgtagctgcccgtggtttggatattcccgaggttgacctt
gttatacagtgctcaccaccaaaagatgttgattcctacatccaccgttctggacgcacg
ggccgagctggccgaactggtatctgcatttgtttgtttcagagaagagaagaagatctt
ctgaaacaagtcgagcacaaagcgggtattacctttaagcgtgtaggcgttccttctgct
acagatgtaattaaagcttcaagtagtgatgccaaaaagttgctggaggctgttcctccc
tctgcggtagactacttcagaaaatcagctgaagagctgatagatgaaaagggggcggtg
gctgccctggctgcagccctggcgcacatttctggggcagctcacatccagcagcgctcc
ctgctcaactcaacagctggttttgtgaccatggtgttgaagtgttcgatagagatgcat
accatgggctatgcctggcgggggctgaaggaacagcttggggaggaagtcgacaacaag
gtgtctgcaatgcgtttcctcaaggggaagatgggtgtgtgctttgatatccctgttgat
gaactgagtaacatacaggagcagtggaaggacacacggcgctggcagttgtcggtggca
agtgagttgcctgagctggaagaatatccccaggaggcgggacgagggttctccaagttc
ggaaacagcaggcaaggagacttcaagagaaaaagctggttcaagagtggaaatcgggga
ctttaa
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