Corvus cornix (hooded crow): 104690359
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Entry
104690359 CDS
T03546
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104690359 (CHD7)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104690359 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
104690359
NCBI-ProteinID:
XP_010399438
LinkDB
All DBs
Position
2:116810149..116943938
Genome browser
AA seq
3013 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENTVNPMGQQMPMDQGFPALQSSLHHPPAN
QNQAKLTHFDHYNQYEQQKMHLMDQPNRMISNAPGNGIASPHSQYHNPPVPQVPHSSGAG
GQMGVYPGMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQQQQPQPTQPPQAPSG
PPGQGHPQHMQQMGNYMARGDFSMQQHGQPQQQRMNQFSQGQEGLNQGNPFIATSGPGHL
SHVPQQNPSMAPSLRHSVQQFHHHPPAALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSR
SQTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPS
NSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRP
GSAGIPMEVGSYPNIPHPQPSHQPPGAMGIGQRNMGPRNMQQNRPFMGMSSTPREMGGHM
RPNGCPGVGLADPQAIQERLISGQQLPSQQQSFQQQMPTCPPMQPHPGIHHQSSPPPHPH
HQPWAQLHQSPQNTPQKVPVLQHSPSEPFLEKPVPDMTQVSGPNTQLVKSDDYLPSIEPQ
PQQKKKKKKNNHIAAEGPSKGFGKEDFPGGLDSQNLSRNSVDCSQEDKKKKKKPKAKKEP
KDPKEPKEKKEPKTPKVPKTPKEPKEKKAKNTTPKPKTSKKASSKKQDSEASAAKKKVNK
GKEGSENSDLEKTPPPSPHPEDEDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADA
AGRDSPSNTSQSEQQESADAEGPVVEKIMSSRLVKKKMENGEEVEIEEFYVKYKNFSYLH
CQWASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEVDRIMDFSRSTDDN
GEPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMERVERPPADDWKKSE
SSREYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHG
PFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKF
HAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPL
QNTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKN
LAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYL
INGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVR
CLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTA
ADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKA
VLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHT
ITIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPR
VRKQTRLYSAVKEDELMEFSDLESDSEEKPSTKPRRPQDKSQGYARSECFRVEKNLLVYG
WGRWTDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTR
ALVNHSGLSAPVPRGRKGKKVKAQSSQPMLQDADWLTTCNPDVLFQEDSYRKHLKHHCNK
VLLRVRMLYYLRQEVIGDQADKILEGADSSEVDVWIPEPFHAEVPADWWDKEADKSLLIG
VFKHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEY
KPTRTPFKDEIDEFANSPPEDKEESIESHTNKHSESNADLGQLYWPNTSTLTTRLRRLIT
AYQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVV
STFGVIFDPVKHQFEWNQFRAFARLDKKSDESLEKYFNGFVNMCRRVCRMPVKPDDEPPD
LSTLIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGKHDK
DLLIGAAKHGVSRTDYHILNDPELSFLEAHKNFAQNRGTGNANTVSSVNPLGAGCSQTPP
IVPSTPVQEEKTTEQTESKVEGSENPAAKEKSEIKEETDTADKDTKPDCDAEAEPGSVKC
ELKDIEMSTDVDPKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSQGKNFDEESNASM
STARDETRDGFYMEDGDPSVVQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNR
RQMFDFQGLIPGYTPTAVDSPLQKRSFAELSMVGQATVSGSEDLTASPQLSKEDALNLSV
PRQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKIVDLSKASREATSSTS
NFSSVTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLIDGEPPMKRRRGRR
KNVEGLDLLFMSNKRTSLTVEDAEVTKAFEEDMEALPARNIPSPGQLDPDTHIPVINLED
GTRLVGEDAPKNKDLVEWLKLHPTYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKL
DINTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVP
ESMFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLT
SLQNLQNLQSLQLAGLMGFPPGLATAAAAGGDAKNPAAMLPLMLPGMAGLPNMFGLSGLL
NNPITATTGNATTASAQGETEDGASKAEEKRNENEEENKDSEKSTDTVSATDSANGSVSA
ATAATTATATTTTTTNTGLPTNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPAL
AGLQNAVGSNEEKATDKTEGAAFKDEENLEGSDAEESLDKTADSSVLEDEIAQGEELDSL
DGGEEIENNENDE
NT seq
9042 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctgtttggagaagatgggaatattttcagtgaaggg
ttggaaggtcttggagaatgtggatatcctgaaaatacagtgaatcctatgggtcagcaa
atgcccatggatcaaggatttcccgctttacagtcgtctcttcatcatccccctgcaaat
caaaatcaagccaagttgacccattttgatcactataatcaatatgaacagcagaaaatg
cacctgatggatcagccgaacaggatgataagcaatgcccccgggaatggtatagcgtct
cctcattcgcagtatcacaaccctccagttcctcaggttcctcacagcagtggtgctggt
ggtcagatgggagtctatcccggcatgcagaatgaaagacatgggcaaccttttgtagac
agtggctccatgtggggaccacgggcagttcaagtgccagaccagataagagcaccatac
cagcagcaacagcagcagcagcagccgcaaccgacacagccgccacaggcaccctccgga
ccccctgggcagggccatcctcagcacatgcagcagatgggaaactacatggctcgtggt
gatttttcaatgcagcagcatggtcagccgcagcagcagaggatgaaccagttttctcaa
ggccaagaaggcctcaatcagggaaaccctttcattgccacctcaggacctggccacttg
tctcatgtgccccagcagaatcccagtatggcaccttctttgcgacactcagtccagcaa
tttcaccaccatccccccgctgctctccatggggaatcagtagcccacagtcccagattc
tcccctaatcctccccagcagggtgctgttaggccgcaaacacttaattttagttctcgg
agccagacggtaccctcacctactataaacaactcagggcagtattctcgatatccttac
agtaaccttaatcagggattagttaataatacagggatgaatcagaatttaggccttaca
aataacactccaatgaatcaatctgtaccaagatacccaaatgctgtcggatttccatca
aacagtggtcaaggactaatgcaccagcagcccatccaccctagtggctctcttaaccaa
atgaacacacaaactatgcacccttcacagcctcagggaacttatgcctctccacctccc
atgtcacctatgaaagcaatgagtaatccagcaggtacacctcctccacaggttagacct
ggtagtgctggaataccaatggaagttggcagttacccaaatataccccatcctcagccg
tcacaccagccccctggtgccatgggaattggacaaaggaatatgggccccagaaacatg
caacagaatcgtccatttatgggtatgtcttcaacaccacgggagatgggtgggcacatg
agaccaaatggttgtccaggtgttggccttgcagatccacaagcaatacaagagcgacta
atatctggccagcagcttcctagtcaacagcagtcttttcaacagcaaatgccaacctgt
cctcccatgcagcctcatccagggatacatcatcagtcttcaccacccccacatcctcat
catcagccttgggcacagcttcaccagtcaccacaaaacacaccacaaaaagtgcctgtc
cttcagcattctccgtcggaaccctttttagagaaaccagtgccggatatgactcaggtt
agtggaccgaatacccagctagtgaaaagtgatgattatctgccgtcaattgagccgcag
ccacagcaaaagaaaaagaaaaagaaaaacaatcacattgctgcagaaggtcccagtaaa
ggttttggtaaggaagactttcctgggggacttgacagccagaatctaagcagaaactca
gtggattgctcccaagaagacaagaagaaaaagaaaaagcccaaggcaaaaaaagaaccg
aaggatcctaaagaacccaaggaaaagaaggaacccaagacccccaaagtccctaagacc
cctaaagagccaaaggaaaagaaagcaaaaaataccacgccaaaacccaagaccagcaaa
aaggctagtagcaagaagcaagattcagaagccagtgctgcgaagaaaaaggttaacaag
ggaaaggaaggttctgaaaactcagatttggaaaaaactccaccaccgtcacctcatcct
gaagatgaagatgatccaggggttcagaaacgacgctccagcaggcaggtgaagaggaag
cgttatactgaagacctggagttcaagatttcagatgaggaggctgatgatgctgatgct
gctggaagagactctccttcaaatacttctcagtcagagcaacaggaatctgctgatgct
gaaggtcctgttgtggagaaaatcatgagtagccgtttagtcaagaaaaagatggaaaat
ggagaggaagtagaaatagaggaattctacgtaaagtacaaaaacttttcttaccttcac
tgtcagtgggcatctgtggaagagctggacaaagacaagagaattcagcagaagattaag
cggtttaaagcaaaacagggccagaataaattcctttccgaaattgatgatgagcttttt
aatccagattatgtggaagttgatcgaatcatggacttttcacgtagcacagatgataat
ggagagcctgtaacacattatctggtgaagtggtgttcgcttccttatgaggacagcact
tgggagctcaagcaagacatcgaccaagccaagatcgaagaatttgagaaactgatgtct
agggagccagaaatggagcgtgtggagcgacctcctgccgatgactggaagaaatcggag
agttccagggagtataaaaacaataacaaactcagggaataccagttggagggagtaaac
tggcttcttttcaattggtacaacacacgaaactgcattttagcagatgaaatggggttg
ggaaagactatccagtccattacgtttctctatgagatatatttgaaaggaatccatggt
cctttcttggttattgcaccattgtccacaattcccaactgggaaagggagttccgcacc
tggacagagttgaatgtggttgtgtatcatgggagtcaagcgagtcggcgaaccattcag
ttgtatgaaatgtatttcaaagatccacagggtcgtgtgataaaggggtcctacaagttc
catgccattatcacaacatttgaaatgatcttgactgactgcccggagctgcgtaacatt
ccatggcgttgcgtggtcattgatgaggcccacaggctgaaaaacaggaactgtaagctt
ttggaaggactcaagatgatggacctggagcataaagttctgcttactggaacccctttg
caaaatacagtagaagagctgtttagcttgcttcacttcttggaaccaggtcgctttccc
tcagaaaccacattcatgcaagaatttggggatcttaaaactgaagagcaggtgcaaaaa
ctgcaagctattttgaagccaatgatgctgagacgtctcaaggaggatgtagaaaagaac
ctggccccaaaagaggaaaccatcattgaagttgagctgacaaatattcagaagaaatac
taccgtgctattcttgaaaagaatttcacatttctttccaagggtggaggtcaggcaaat
gtacctaatcttttaaacactatgatggaactaagaaaatgctgcaatcatccatacctt
attaatggtgctgaagagaaaattttggaagagtttaaagaaacacacaatgccgactct
ccagattttcagctccaggcaatgatccaggctgctggcaagctagtactgattgacaag
ctgctgccaaaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgc
tgcttggacatactggaagactacctcattcaaagacggtacccatacgaacgaattgat
ggtcgagtgagaggcaacttgcgtcaggcagctattgacaggttttcaagacctgattct
gataggtttgttttcctgctgtgtacaagggcaggaggtttgggcattaatcttactgct
gctgatacctgcatcatttttgattcagactggaacccccaaaatgacctccaggctcaa
gcacgatgtcacagaatagggcagagcaaatcagtgaaaatttacagattgataacaagg
aattcttatgaaagggaaatgttcgacaaagctagcttgaagttgggccttgataaagct
gtgctgcaatctatgagtggaagagaaaatgccacaaatggggtgcaacagctttctaaa
aaagaaatagaagatcttcttcgaaagggggcatatggtgctctgatggatgaggaagat
gaagggtctaaattttgtgaagaggatattgatcagattctcttaagacgaacacacaca
attaccattgaatctgaaggaaaaggctcaacatttgcaaaggctagtttcgttgcatct
gggaacaggacagacatttctttggatgaccctaatttctggcagaagtgggcaaagaaa
gctgagctggatattgatgctctaaatggaaggaacaacctagttattgatacaccaaga
gtaaggaagcaaaccagactctacagtgcagtcaaagaggatgaactgatggagttttca
gacctggaaagcgattctgaagaaaagcctagcactaagccccgtaggcctcaggacaaa
tctcaaggttatgcacgaagtgaatgtttcagagtggagaagaacttgttggtttatggc
tggggtcgatggactgacatcctctcacatgggcgctataaacgtcagctaacagagcaa
gatgtggaaaccatctgccggactatcctggtgtattgtcttaatcattacaaaggggat
gaaaatatcaaaagtttcatctgggatctgatcactccaactgcagatgggcaaactcga
gctttggttaatcattctggtctgtctgcaccagtgcccagagggaggaaagggaagaaa
gtaaaagcccagagttcacagccaatgctgcaagatgctgattggctcacaacctgtaat
ccagatgtattatttcaagaagacagctataggaaacatctcaaacatcactgtaataag
gtcctgctgcgtgtccgcatgctctactatctacgacaagaagttataggggaccaagca
gacaagatcttagagggtgctgactcaagtgaagtagatgtatggatacctgagccattc
catgctgaagttcctgcagactggtgggataaggaggcagataaatcccttttaattgga
gtatttaaacacggttatgagaagtacaattctatgagagctgatccagcactgtgcttt
ctggaacgggttggcatgcctgatgcaaaggccatagctgctgaacagagagggacagac
atgttagcagatggtggtgatgggggtgaatttgacagagaggatgaagatccagaatat
aagccaactagaactcctttcaaggatgaaattgatgaattcgcaaactcacctccagaa
gataaagaggagtccatagaatcacacacaaacaagcacagtgaaagcaatgctgattta
gggcaactctactggcccaacacttcaaccctgactacccgtctgcgtcgcctcattact
gcctatcagcgcagctataaaaggcaacaaatgaggcaagaggcactaatgaagactgac
cgcaggagacgtcggcctcgagaagaagtgagggcactggaggcagaaagggaggctata
ataactgagaaacgacaaaagtggacaagaagagaagaagctgatttttatcgtgtggtg
tctactttcggagttatttttgatcctgtgaaacatcagtttgagtggaatcaattcaga
gcatttgccaggcttgacaaaaagtccgatgaaagcttggaaaagtattttaatggcttt
gtgaatatgtgtagacgagtgtgccgaatgccagtcaaaccggatgatgaacctcctgat
ctttccacgctgattgagccgatcacagaggagcgcgcttctagaactttgtatcgcatc
gagctgctgcgcaagatccgggaacaggttctccatcacccgcagctgggggagaggcta
aaactttgtcagccaagtctggacctgccagagtggtgggagtgtggtaaacatgataaa
gacttactgattggtgctgctaaacatggagtcagtaggacagattatcacattctgaat
gatcctgaactctcttttcttgaggctcataaaaactttgctcaaaacagagggacaggt
aatgcaaatactgtctcttctgtaaaccctctgggtgctggctgcagtcaaacaccccca
attgtcccatccacaccagtacaagaagaaaagactacagaacaaacagagtctaaagtt
gaagggtctgaaaatccagcagccaaagaaaagtctgaaatcaaagaggagacagatact
gcagataaggacactaaaccagactgtgatgctgaggccgagcctggctctgttaaatgt
gaattgaaagacatagaaatgagtacagatgtagatccaaaatctatttctgagaaaggt
tcagaagaagatgaagaggagaaactggaagatgatgataaatcagaagaatcctcccaa
cctgaagcaggagcagtctctcagggtaagaattttgatgaagaaagcaatgcctctatg
agtaccgcaagggatgaaacacgcgatggattctacatggaagatggggatccctctgtg
gttcagctgcttcatgagagaacatttgccttctctttctggcctaaggaccgagtaatg
atcaaccgattagacaacatctgtgaagcagtgctgaaagggaagtggccagtaaatagg
cgccagatgtttgatttccaagggctcatacctgggtacactccaacagctgtggacagc
cctctgcagaaaaggagctttgcagagctctccatggttggtcaagccactgtcagtggc
agtgaagatctcactgcttctcctcagttatcaaaggaagatgcactcaatttatcagtt
ccacgtcagaggaggaggagacgaagaaagattgaaattgaggctgagagagctgccaag
aggagaaatcttatggaaatggttgcccagttacgtgagtctcaggtggtctcagaaaat
ggacaagaaaagattgtagatttatcaaaggcctcacgagaggcaacaagttctacctca
aatttttcatctgttacttcaaagtttatcttgcctaatgtctccacacccgtgtctgat
gcctttaaaactcaaatggagctgctgcaagcaggtctttcacgcacacccacaaggcat
ctactaaatggctctttaatagatggagaaccacccatgaagaggaggagaggaaggagg
aaaaatgtagaagggcttgatctgttattcatgagcaacaaacggacatcgttgactgta
gaggatgcagaagtgaccaaagcttttgaagaagatatggaagctctaccagcaaggaac
attccatctcctggtcaattagacccagacactcacatccctgtaatcaatctagaggat
gggaccaggctggtgggagaggatgccccaaaaaacaaggatctagttgaatggcttaaa
ttgcatcctacttacactgtagatatgccaagttatgtaccaaagagtgcagatgtgctg
ttttccccatttcagaagccgaaacaaaaacgacacagatgtcgaaatcctaataaactg
gatataaacaccttgacaggagaagaaagggtacctgttgtaaataaacgaaatggaaag
aagatgggtggagctatggcccctccaatgaaggacttgccaagatggctggaagaaaat
cctgagtttgctgttgctccagattggactgacattgttaaacagtctggttttgttcca
gagtccatgtttgaccgtcttctcactggacctgttgtgagggaggaaggagcaagcaga
agaggaagaaggccaaaaagtgaaattgccaaagcagctgcagcagctgctgctgtagca
tcaacttcgggaatcaacccactactaatgaacagtctgtttgctggaatggacctcaca
agcctccagaacctacagaacctgcagtctctccagctcgcaggcctcatgggctttccg
ccagggctagcaacagctgctgctgctggaggggacgctaaaaatccggctgccatgttg
cctctgatgttgccagggatggcaggattgcccaatatgtttggactaagcggattgttg
aataacccgataacggctactactggaaatgccactactgcttccgctcaaggagagact
gaggatggcgcttcaaaagctgaagagaagagaaatgagaatgaagaggagaacaaagac
tctgagaaaagcacagacactgtttctgctactgactctgcgaatggatctgtcagtgct
gctactgcggcgactaccgccactgccaccactaccaccaccaccaacactggattgccc
acaaaccctctggccttcaatcctttcctgctgtctaccatggctcctggcctcttctat
ccatctatgtttctacctccaggactgggaggattgactctgcccggtttcccagcacta
gcaggactacagaatgcagtgggctccaatgaagagaaggctactgacaaaactgaagga
gctgcctttaaagatgaagaaaatctcgaaggcagtgatgcagaggagagccttgataaa
actgcagattcctccgttttagaagatgaaatagcacagggtgaagaattagactcactt
gatgggggggaagaaatagaaaacaatgaaaatgacgaataa
DBGET
integrated database retrieval system
