Corvus cornix (hooded crow): 104690395
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Entry
104690395 CDS
T03546
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104690395 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccw01009
]
104690395 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104690395 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
ccw03029
]
104690395 (RB1CC1)
Protein phosphatases and associated proteins [BR:
ccw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104690395 (RB1CC1)
Membrane trafficking [BR:
ccw04131
]
Autophagy
Autophagosome formation proteins
ULK complex
104690395 (RB1CC1)
Mitochondrial biogenesis [BR:
ccw03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104690395 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
104690395
NCBI-ProteinID:
XP_039404410
LinkDB
All DBs
Position
2:complement(113793579..113862224)
Genome browser
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLSKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLDSSPEHGGAESEETEDGKSA
ELVLYPDISKVNSKSMLASFCKSVEHSALEGTEPENVKDDKESGQSATVQDNEMSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMES
TTGTAIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTSSCVKDVSAENASLSVCVEKCRVIAQDSKIHLRGIKEDLCHFRTLVQKEQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLNDKHQNELQCLKSEYETKINKLLEDGEENKKKIKKL
KGDLLGLEEVLQTKNNEFAIVKNEKEAVVCLQNEKDQKLLELECQMETQNSEIKELRQSR
EIVLEDLKKLHVENKEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKVVAEHKDCLD
KLKKENQHRLEQMQESHEVVMQEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLRSQIDKETESLKKEIDKLNNKIQISSDEYQVGLSELRTLMTIEKDQ
CISELVNRYEEESNLLRTELNKVTLLHQKTAEAEKRLSEQITELQSKLELETSALEKEKT
EKLSLCEQQEKYEAIIHKLKEEKELLVSNQEQDRQLLIQKLNCEKEDAVQTACKEFELQR
EAAEKGLLDRIQQLEMQVNRSPPAESTAESSLVAELQEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVNKLRSSNFSPSTYLAAVSEACGACAADVPTDTDRLVADFGAEGRMD
STMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacgtttgatactgaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtacaagattgccatt
cagcaccaagtactggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacattttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgcagtgtttcatacagtagcatcacgaacacag
cttgctgtggaaatgtatgaggttgccaagaagctttgctccttttgtgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgccataatggccaacttggaagactgt
acatactcttatcaaaagctgctttccaagtttgaaaatgtgtattcaagctatttgcag
tccatagatgatatcaaattgaaacttacacacttgggttctgctgtttctatcatggcc
aagataccactgctggagtgcctgacaagacacagttacagagagtgtttaggaagactg
gattcttcacctgaacacggaggagcagaaagtgaagaaactgaggatgggaaatctgct
gaattggtgctttatcctgatatatctaaagtgaacagtaaatcaatgttagcgtcattt
tgcaagtcagttgaacattcagctttggaaggcacagagcctgaaaatgtaaaagatgat
aaggaatctggtcaaagtgctactgtccaggacaatgaaatgtcagtagaattgaaagat
gatgatcagccttccttcaatgtgtctttgttagactggataaatgttcaagatagacct
aatgatgttgaatccctggtcagaaaatgttttgattctatgagcaggcttgatccaagg
atcatccaaccctttctggcagagtgtcgccaaactatcgccaaactagataatcagaac
atgaaggctattaaaggtcttgaggatagactctatgcattggaccagatgatagcaagc
tgcagcagactggtgaatgaacaaaaagaacttgctcagggatttttggcaaatcagaag
agagctgagaacttgaaagatccttctgtgctacctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctgcaagttagactgaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactacaagcactgcttcgtcttgtaacagag
ctcctagaaagggtcaaagttgtagaggctctcagcactgttcctcagatgtactgttta
gctgttgttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaaagatgggaaacatctatatgaagctgaaaaggcaaaaagggaatctttc
ggtaaactctttaggaagtcctttctaaggaatcgtttgtttagaggacttgactcctgg
cctccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctca
ttgagtgacttgcagtttttgcagtctttctgtccttcagaagtacagccattactcagg
gttcccatactatgtgactttgaacctcttcaccagcatgtacgtgctctacataacctg
gtcaaggcagcacagagtttggatgaaatgtcacaaaccattacagacctgctgaatgaa
caaaaggcctccaatagtcaagcatcgccacaatctgctactacaccaaggatggaaagt
actacaggaaccgcaattgctacctcttcaagaactcctccatcactcagtcttcagggt
cccctgtgtcctcctgtgtgtcccccagctccattagaagaattgtctccagacagcatt
gatgctcatacgtttgattttgaaaccattgcccatccgaacttggagcaagctcttaag
caaggatcattagacttggattcattagcagaaagtccagaatctgactttatgtcagca
gtaaatgaatttgtaatagaagaaaatccagtgtctcctaatgtaataagtgacccacaa
agcccggaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtaga
cgtatgcaagatacaagttcttgtgtaaaggatgtttcagcagaaaatgcttctctcagt
gtttgtgtggagaagtgtagggttattgctcaagactcaaagatacatttaagaggtata
aaggaagatctctgccatttcagaacacttgtacaaaaagaacagtgtgacttttctaat
tctttaaaatgtacttccttagaaatagtaaatacaattgagaaggtaaaactttcactt
gaaaaaacactaaatgataaacatcaaaatgaattacaatgtttgaaaagtgaatatgaa
actaaaattaataaactattggaggatggtgaagaaaataaaaagaaaatcaaaaagtta
aaaggtgacctgttaggccttgaggaagttcttcagactaagaacaatgaatttgcaata
gtaaagaatgagaaagaagctgtagtttgccttcagaatgaaaaagaccagaaattactt
gaattggaatgccaaatggagacacaaaattctgaaattaaggaactaagacagtcacgt
gaaatagtacttgaagacttgaaaaaacttcatgttgaaaacaaggagaaactacaactc
ctgagggcagaacttgagagtttagagcaaagccatttaaaagaactggagagcaaccta
caagccaggcatttacaggaatttgagaaggtcgtagctgagcacaaggactgtttggat
aaattaaaaaaagagaaccagcatagacttgaacaaatgcaggaatctcatgaagtagtt
atgcaagagaaacaacaacaagtagaagagttacagctcaaggtttcagatctgtctgat
ttgaggtgcaaattagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaag
cttcttttggaagaaagcagaaaccagcaacaagagaccttaagatctcaaattgacaag
gaaactgaaagcttaaaaaaggagatagataaattaaacaataaaatacaaattagcagt
gatgaatatcaagtgggcttatcagaactaaggactctgatgacaattgagaaagatcag
tgtatttctgagctagtaaatagatatgaagaagaatcaaatttgcttagaactgaatta
aataaagtaacgcttcttcatcaaaaaactgctgaggcagaaaaaagactttcagagcaa
ataacagaactacaaagtaagttagagttggaaacgagtgccctagagaaggaaaaaacg
gaaaagttgtctctctgtgagcagcaggaaaaatacgaagctattatccataagctaaag
gaagagaaagaactgttagtatctaaccaagagcaagacaggcagttgctcattcagaag
ctcaattgtgaaaaagaggatgcagtacaaactgcttgtaaagagtttgaattacagagg
gaagcagctgaaaaagggcttttggacagaatacaacaacttgagatgcaagtgaatcgg
agtcctcctgctgaatcaactgctgaatcaagcttagttgctgaacttcaggagaagctt
caggaagaaaaaatgaagttcttagagcaacttgaagaacaagagaaaagaaagaatgaa
gaaatgcagaacatcaggacatctctcactgcagagcagcagaccaactttaacactgtt
ctggcaagagagaaaatgaaaaaagaaaacataattaatgatcttagtgacaaattaaaa
gtgcttacacaacagcaagaaaaagataaggatttgattgaaacactttctgaagatcgt
gctcgcttacttgaagagaagaagaagcttgaagaagaagttaataaactgagaagtagt
aatttttctccatcaacctacttggcagcagtgtcagaagcttgtggagcctgtgcagct
gatgtgcccactgacacagacagattggttgctgattttggggctgaaggaagaatggac
tccacgatggaaaccagtatgatggctgtgcatgaaaatgtccatatgtctgaagagaag
cagaggataatgttgttagaaagaactttgcagttgaaagaagaagaaaataagagatta
aatcaaagattgatgtcccaaagtatgtcatcagtatcctcaagacattctgaaaaaata
gcaattagagattttcaggttggcgatttggttcttattatcttggacgaaaggcatgac
aactatgtgttgtttactgttagtccaaccttgtatttcttgcactcagagtcccttgct
gcattggatctcaaaccaggtgagtgtgcatcaggtgcatctaggagaccttgggtgcta
ggaaaagtgatggaaaaggaatactgccaggcaaaaaaggcacaaaacagattcaaagtt
cctttgggtacaaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
DBGET
integrated database retrieval system
