Corvus cornix (hooded crow): 104690444
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Entry
104690444 CDS
T03546
Symbol
LSM5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5 isoform X1
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03018
RNA degradation
ccw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104690444 (LSM5)
09123 Folding, sorting and degradation
03018 RNA degradation
104690444 (LSM5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104690444 (LSM5)
03041 Spliceosome [BR:
ccw03041
]
104690444 (LSM5)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104690444 (LSM5)
mRNA degradation factors
5'-3' decay
Lsm complex
104690444 (LSM5)
Spliceosome [BR:
ccw03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104690444 (LSM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104690444
NCBI-ProteinID:
XP_039423609
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All DBs
Position
Z:50339748..50344191
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AA seq
62 aa
AA seq
DB search
MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGP
EV
NT seq
189 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcgacaaagaaattgttgggacacttctaggatttgatgatttcgtcaatatg
gtgttggaagatgttacagaattcgagatcacacctgagggcagaagaatcacaaagctg
gaccagattctgctaaatgggaataacataacaatgctggttcctggaggagaaggacct
gaagtgtga
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