KEGG   Corvus cornix (hooded crow): 104690451
Entry
104690451         CDS       T03546                                 
Symbol
DMXL1
Name
(RefSeq) LOW QUALITY PROTEIN: dmX-like protein 1
  KO
K24155  rabconnectin-3a
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw04142  Lysosome
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    104690451 (DMXL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccw04131]
    104690451 (DMXL1)
Membrane trafficking [BR:ccw04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    104690451 (DMXL1)
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    104690451 (DMXL1)
   RAVE complex
    104690451 (DMXL1)
SSDB
Motif
Pfam: Rav1p_C Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_EML Beta-prop_WDR19_2nd Beta-prop_HPS5 Beta-prop_VPS8 MIOS_WD40 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 104690451
NCBI-ProteinID: XP_039422447
LinkDB
Position
Z:complement(48877592..48955339)
AA seq 3062 aa
MNLHQVLTGAVXPGDSCFSVGSLHDQPFTAYASGCDIVVLGTDFERLQIIPGAKHGNIQV
GCVDCSMQQGKVAASYGKVICIFEPVSLLKQNSSHHNVLDYQWQKNAQISLDAIAHNLTW
DPAGTRLLTGSNCLQLWSSVPLENPTDNDSTERTDVGLGEWRCIWQCKTASQVCLMKFSP
DGEFFATAGKDDCLVKVWYNTESWRSAVTPPGASPENQAKELDFSFVYLAHPRSVNAFSW
RKTSKFMPRGAVCNVLLTCCKDNVCRLWAETLLPNDSLLYGGGYSNWSEAANFTNNFKRN
ISSKEKVQSALELNLRHFRRGRRRSGAVVAHTGYALHQQDPHEAHRSIPPHANALCHFHI
AASINPATDIPLLPSITSLSLGENEEKSGPFVVHWLNNKELHFTLSMEVFLQQLKKSFEH
HSPETNTEDSNQVDGRTEEEADENGDEQKGNQEKKELDDEKAAPYSNLVPLSSAIIDHEI
EILLSEWGKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDA
NSLCRSIVMYACTKNVDLAIQQGKQKPPGLTRSSSMLISSGHSKSTNSLKLSIFTPNVMM
ISKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHN
ALISPDVETALQADDSLKSQESPVRPQSRGNANVTSQDPNAVYSELILWRVDPVGPLSFS
GGVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQHLRLYQAVIDA
KKLLCELSNPEISKYVGEVFNIVSQQSTARPGCIIELDAITELHGRKTQLFHVFQEDFIL
SNLEREMPSKKNNLSVSGNQQKGFSEKFYLIVIEYTQNHSLLHMWHLHLKSVPVSIDEKI
GSYPSEEATQTEELYSSPDPEKIQSPFTQKYRACRANLQSTSRLTLSSKMVYSQELSMPE
GVEIISVKPSAGHLSSSSIYPVCRAPYLLATSCSDEKVRFWRCRVVTESSSSSVPEYSTD
SDVKYVWEEWPLLIEDGLPSSSAINVPGRPTEVSCAHTNRLAVAYKQVASENSHLSQDFV
MHVSIFECESTGGSSWILEQTLNLDEIGTMLDSGVSVDRNLVAYNQQDASLSHGGNIIPN
TKHLVHLDWMSREDGSHILTVGIGSKLYMFGQLCGKRQEQNGNEIVAISHSGSPKAATLS
GFVLLRCVDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQSPSKQELVGTDSY
SGSMPCITSLMKQSQSAASGLHPPKRTLTRSMTSLAQKLSGKRSACDLSMEMEDSGLFEA
AHTLSPTLPQYHPYQLLELMDLGKVRRAKAILSHLVKCIAGEVVAINESEPNHDKRLRSL
TISASGSTSRDSKTFSKTETTDYIEIDSVPPLPLYALLAADDDSSHSCSEKSNNQNSQNK
KDMPNDSYENLFQNTVISTDDLVMFEADEDSSKPKVIDLSQYSPTYFGPEHAQVLSGHLL
HSSLPGLTRMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRLHTFLT
TALPPVHRAQLLHQGLSTSHFAWAFHSVAEEELLSMLPAVQKGDPAWSELRAMGVGWWVR
NIHSLRKCIEKVAKAAFQRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMTQFFGNNFT
EDRWRKAALKNAFSLLGKQRFEHSAAFFLLAGHLKDAVEVCLEKLHDIQLALVISRLYES
EFEVSSTYKSVLQKRVLGSVSTGKESSGNIHCDPFLRSMAYWILEDYSKALDTLIKHSVE
DEGDGDGSSSCNPAVFNFYNYLRTHPLLLRRHFGSSDTSSTHICLTVENGLADKINLGER
RLFFTTAYAHLKSGCPMLALEVLSKMPKVVKRSKSFSKSPSLMDTGKDFSPYSPFKEFET
KDQASSIDWSQPVFNGLGSSSDCSSEKHSSSTLSFDWSQPSALFQDEQFQLQSDSDENDE
SEDSSLVKKELKPLKKTEKLHETSSSYTESFSVVDYKDILSPSEDILSAQLKFRACLKIL
TVELRTLSTGYEVDGGKLRYQLYQWLEREVVALQKTCDYGVEEEEIQPGIRGMPEEATLH
ENTEDFADQQKTMLQKEDFQKRRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILL
LQESQQEQSVQIPSSPPPEQSSIPLLFACTASAKTVVANPLLHLGNLTHDILHAIINLDS
PPHPDTQNSKIYVMHTLAASLSACIYQCLCDGHSYSSFHANQFTGTVYQTVLLTQHHSLR
TTSLEETVTPNTSPAQWPGMTALIRLLNSAGEEAQPGLTVLLCEILTAVYLSLFIHGLAT
HSSNKLYRIMAHPLNNKMWSAIFGGGAHTPSKGQQQLKTKTDDGEKQQKPYRLSSKTSPK
ESSQLPALPLVDQQSSSYKERFIPPELSIWDYFIAKPFLSSQSRVEYDSEESQESDEDDE
DIDGDMFGSNSHNQEHSNSNSYSWSLMRLAMVQLVLHNLKIFYPLAGHDLSELPVSSPIC
HAVLKTLQRWEQVLLRRLELYGGPPQHYISVHASEDALAAGPALLRHKTLLEPTNTPFRS
SSHVALSVKRLWQYLVKQEEVQETFIRNIFTKKRCLNEPLEEHNETMKNSAVEEPVISKI
ETDLGYPGGKARIIHKESDIITAFAVNKANRNCIAIASSHDIQELDVSAILATQIYTWVD
DDTEIENKGADDFLVIHARDDLVNVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVEYSN
KFNGIRKELARKEMLKKAINNVRRMASHPTLPYYLTGAQDGSVRMFEWGHAQQITCFRSG
GNSRVTRMRFNYQGNKFGIVDADGYISLYQTNWKCCPLTGTSPKPYLTWQCHNKTANDFV
FVSSSSLIATAGFSSDNRNICLWDTLVSPTNSLVHAFICHDSGATVLAYAPKHQLLISGG
RKGFTCIIDLRQKQQQQLLQSHDSPVKAIAVDPAEEYFVTGSAEGNIKVWSLSTFNLLHT
FINEHARQSLFRNIGTGVMQIETGPANHIFSCGADGTVKMRILPDRFSPLKDVLKNDVKF
MI
NT seq 9189 nt   +upstreamnt  +downstreamnt
atgaacctgcaccaggtgctgacgggcgctgtgnaacccggggacagctgcttctccgtg
ggcagcctgcacgaccagcccttcacggcatatgcatcaggatgtgatattgtggtactt
gggactgactttgaaagattacagataatccctggagcaaaacatggaaacattcaagtg
ggatgtgtggactgttcaatgcaacaggggaaggttgcagcttcttacggcaaggtgatt
tgtatctttgagccagttagcctcttgaagcagaacagcagtcatcataatgtgttagat
taccagtggcagaagaatgctcaaatctcactggatgccatagcacataatctaacatgg
gatcccgcaggaactcgccttctgactggttccaattgtcttcaactttggtccagtgtt
cctttggaaaaccctactgacaatgacagtactgaaagaacagatgttggacttggagaa
tggagatgtatctggcaatgcaaaactgcttctcaagtttgtttgatgaaattctcacca
gatggggagttttttgctactgctggaaaggatgactgtcttgtgaaagtatggtacaac
acggagagctggcggtcagctgtaacaccacctggtgccagtccagaaaaccaagcaaaa
gaacttgatttttcgtttgtttatttggctcatcctcgatcagtaaatgcattttcatgg
agaaagaccagtaaattcatgccacgtggtgctgtctgcaatgtactcctgacttgctgt
aaggataatgtttgtcgtctctgggcagagactttgttacccaatgacagtctgttgtat
gggggaggatacagcaattggagtgaagcggcgaacttcacaaataacttcaagagaaat
atttcaagtaaagaaaaagtgcagagtgcattagagttaaacctgaggcacttccggcga
ggaaggaggaggtcaggtgctgttgtagcacatactggatatgctctgcatcagcaagat
cctcatgaagctcacaggagcattcctcctcatgcaaatgccctttgccacttccatatt
gctgccagtatcaatccagccacagatattcctctactcccttctatcacatctctaagt
cttggtgaaaatgaagaaaaaagtggaccttttgttgtgcactggctaaacaacaaagaa
cttcattttaccttatctatggaagtgtttttgcaacaacttaaaaagagttttgaacat
cattctcctgagactaatactgaggattctaatcaggtggatggcagaacagaagaagaa
gctgatgaaaatggagatgaacaaaaaggaaaccaagaaaaaaaggaactggatgatgag
aaagctgctccatattcaaaccttgttcctttatcctctgctattattgatcatgaaatt
gaaattctgctttctgaatggggtaaaaatgctgacatgctcttcagtatacatcctatg
gatggctccctgctggtgtggcatgtggactggctagatgaataccagcctggcatgttt
cgccaggtgcaggtgtcgtttgtctcgagaattcctgttgcatttccaacgggtgatgca
aactctctttgcagaagtatagtgatgtatgcttgtaccaaaaatgttgacttagctatt
caacaaggcaaacaaaagcctcctggccttacacgatcttcatctatgcttatctcttct
ggacacagtaaatcaaccaacagtttaaaactaagtatcttcacacctaatgttatgatg
atttccaaacatgcagatgggtcactgaaccagtggctagtgagttttgctgaagaatct
gctttttcaactgtactcagtatttcacataaatcccgatactgtggtcaccgttttcat
cttaatgacttggcttgccactcagtattaccactgctgcttacaacctcacatcacaat
gctctaatttcaccagatgttgagacagcactacaggcagatgattctttaaagtctcag
gagtcaccagtaagacctcagagtagaggcaatgcaaatgtgacgtcccaggatcccaac
gctgtttacagtgaacttattctttggagagtagatcctgttgggcctttgtccttttct
ggtggagtttctgaacttgctcggatcaattctcttcatgtttcagctttttctaatgtt
gcatggctgcccacacttatacccagctattgccttggtgcatactgtaattctccaagt
gcctgctttgtggctagtgacggacagcatttaagattatatcaagctgtaatagatgct
aagaaacttctgtgtgagctctccaatccagaaatttctaagtatgtcggtgaagttttt
aacattgtaagtcagcaatctacagctcgcccgggatgtatcattgaactggatgccatc
acagagcttcatggccggaaaacacagttattccatgtttttcaagaagactttatttta
agtaacctggagagggagatgccttcaaagaagaacaatttatcagtctctggtaaccag
cagaagggattctcagaaaaattctacttgatagtgatagagtatacacaaaaccattca
ttgctacatatgtggcatttacatttgaagtcagttcctgtttcaatagatgaaaagata
ggttcatatccgtctgaagaagcaacacaaacagaagaattgtattcttcaccagatcca
gagaagatccagtcacctttcactcaaaagtatcgggcctgtagagcaaatcttcagagc
accagccggcttactctgtcttccaaaatggtgtatagtcaagagctgagtatgccagaa
ggagtagagataataagcgtaaagccatcagcaggacatctcagttcttcttccatatat
cctgtttgtcgtgcgccttacctgctggctacttcttgctctgatgaaaaagttcgattc
tggagatgcagggttgtcactgaatcatcatcttcttccgtgccggaatatagcacagac
agtgatgttaaatatgtatgggaagaatggccattactgattgaggatggacttcctagt
agtagtgctattaatgttccagggaggccaactgaagttagctgtgcacacacaaacaga
ttagcagtagcatacaagcaggtagcatctgaaaacagccatctttctcaagattttgtg
atgcacgttagtatttttgaatgtgaatccacagggggttcttcatggattttagaacag
acacttaatttagatgagataggcaccatgttggactctggtgttagtgttgataggaat
ttagtggcatataaccaacaagacgcttctctgtctcatggtgggaatattatacccaac
actaagcacttggtacacttagattggatgtctagggaagatggttcccatattctgaca
gtgggaattggatcaaaactttatatgtttggtcagctgtgtgggaagaggcaagaacaa
aatggtaatgagattgtagcgatctcccacagtggcagtcctaaggctgcaaccctttct
gggtttgttctgctgcgttgtgttgacttggtttcatctgtagaggggtcacctcctttt
cctgtttccttgtcttgggtgcgtgatggcattcttgtagttggaatggattgcgaaatg
catgtttattctcaatggcaatctccttctaagcaggaactagttggtacagattcctac
agtggaagtatgccatgcataactagcttaatgaaacaaagccagtcagctgcctcaggt
ttgcatccaccaaagagaaccttgaccagatctatgaccagccttgcacagaaacttagt
gggaaacgatctgcctgtgatctgtctatggaaatggaagattctggtctttttgaagca
gctcatacattatctccaactttacctcagtaccatccatatcaactgttggaactcatg
gatctgggtaaagtacgcagagcaaaagccattctgtcccatttggtgaagtgcattgct
ggagaagttgttgctataaatgagtctgagcctaatcatgacaagaggctcagatctctg
acaatcagtgctagtggaagtacctcaagagattccaaaacgttcagcaaaaccgagact
acagactatatcgaaatagactctgttccaccattgcctttgtatgctctgcttgctgcg
gatgatgattcatctcactcctgttcagagaagtccaataatcaaaatagtcaaaataaa
aaggatatgcccaatgacagttacgaaaatctctttcaaaatactgttataagtacagat
gacctcgtcatgtttgaggcagatgaagacagttcaaaaccaaaagtcatcgatctttct
cagtacagcccaacttactttggaccagaacacgctcaagttctttctggtcacttgctt
cattcaagcttgccaggtctgactaggatggagcaaatgtctttgatggccttggcagat
acaattgctactaccagtactgacattggagaaagcagagacagaagtcagggtggagaa
actcttgatgagtgtggtttaaaatttttattggctgttcggcttcacacatttctgaca
acagcgcttcctcctgtgcatcgagctcagctgcttcaccaaggcttatctaccagtcac
tttgcctgggcgtttcattcagtagcggaagaagaactcctgagtatgctccctgcagtg
cagaagggagatccagcatggtcagagctcagagctatgggtgtaggatggtgggttcga
aacatccacagcctgcggaaatgcatagaaaaggtggctaaagcagctttccagcgaaac
aacgatccgcttgacgcggccattttttaccttgcgatgaagaagaaggctgttatctgg
ggattatacaggtcccaaaaagatactaaaatgacacagttttttggaaacaacttcact
gaggacagatggcgtaaagcagcattaaaaaatgctttttctttgctcggcaaacagcgt
tttgaacattctgcagcatttttcttgttggcaggacacttaaaagatgcagtggaggtc
tgccttgaaaaactgcatgacattcagttggctcttgtaatatcaagactttatgaatcg
gagtttgaagtgtctagtacttacaaatctgtactgcagaagagagttctgggaagtgtg
tctactggaaaagagagctcaggaaacatacactgtgacccctttctgcgaagtatggca
tactggattttggaagattatagcaaggctcttgacactttaattaaacattctgttgaa
gatgaaggagatggagatggctcatcaagttgcaaccctgcagtgtttaacttctataac
tacttaagaacacatcctctcttgctgagacgtcattttggctcttctgatacatcttcc
acacacatttgcctaacagtagaaaatggattagctgacaaaatcaacctaggtgaaaga
cggctgtttttcaccactgcatatgctcatctaaaatctggttgtcctatgttagcctta
gaagtgttatcaaagatgcccaaagttgtcaagaggtcaaagtcattcagtaaatcccct
agtttaatggatactggtaaagatttctcaccatactctccatttaaagagtttgaaaca
aaagatcaagcttccagtattgattggtcacagccggtattcaatggtctaggttcatct
tcagattgttcatcagaaaagcattcaagttccactctttcctttgattggagccagcca
agtgctctattccaagatgaacaatttcaactacagtcagacagtgatgaaaatgatgag
agtgaagattcttccttggtaaagaaagagctaaaacctctgaagaaaactgaaaaacta
catgagacaagttctagctacacagaatcttttagtgtagttgattacaaagatattcta
agtccatcagaagatatcctttcagcacagctgaagtttagagcatgcctcaaaatcctt
actgtggagcttcgtacactgtccactggctatgaagtagatggtggaaagttgcggtat
cagctttaccagtggcttgagagagaagtggtagctcttcagaagacctgtgattatggt
gttgaagaagaagagatacagccaggaattcgagggatgccagaagaagctacattacat
gaaaacactgaagactttgctgaccaacaaaaaactatgctacagaaagaagactttcag
aaaagacgtcaatggcttttgaaataccagtcactcctaagaatgttccttagttactgt
atacttcatggctcacatggtggaggcttggcatctgtcagaatggaattaattctgctg
ttgcaggaatctcagcaggagcagtcagtacagataccttccagccctccaccagagcaa
agctccatacctctcctatttgcttgcacagctagtgccaaaacagtggtggctaatcca
ttgctacatcttggcaatttaactcatgatatattacatgctataataaaccttgattcg
ccacctcatccagatactcagaacagcaagatatatgtcatgcataccttagcagcatcg
ctctctgcttgcatctaccaatgtctctgtgatggccacagctacagctcatttcacgca
aatcagttcactgggacagtgtatcagacagtcctgttaactcagcatcattctttaaga
acaacaagcttagaagaaacagtgactcccaacacatcacctgctcagtggccaggaatg
acagctctaatacgtctcttgaattctgctggtgaggaagcccagccaggtctcacagtt
ctactttgtgaaattctgactgcagtctatctcagtctgttcatccatggcctcgcaaca
cattctagcaacaagctgtatagaattatggctcatccacttaacaacaaaatgtggtct
gctatctttggaggaggagctcatacacccagcaaaggacaacagcaattaaagacaaaa
actgatgatggagagaaacagcaaaaaccttacaggctttcatcaaaaacctctccaaaa
gaaagttctcagttgcctgcgttgccattggtagaccaacaatcatcatcttacaaagaa
agatttatccctcctgaacttagcatctgggattatttcattgcaaagccctttctttca
tcacaaagtagagtggaatatgattcagaagagagtcaggaaagtgatgaagatgatgaa
gacattgatggagatatgtttggatcaaattcacataatcaagagcattctaattcaaat
tcttacagttggtcactgatgagattggcaatggttcagctggtacttcacaatttgaag
attttctaccctttggctggacatgatctttcagagcttccagttagctccccgatatgc
catgcagttttgaaaactttacagcgctgggaacaagttcttctccgacgtcttgagctg
tatgggggtccacctcaacattatatttcagttcatgcttctgaagatgctctcgctgct
ggtcctgcattgcttcgccacaaaactttacttgagcctacgaacactcctttcagatct
agcagtcatgtggcactgtctgtgaagaggctctggcagtacttggtcaaacaggaagaa
gtccaggaaactttcatcagaaatattttcacaaagaagcgatgcctaaatgagccatta
gaggagcacaatgaaaccatgaaaaattctgcagtggaggagcccgtcatcagtaagata
gaaacagatttgggatacccaggtggcaaggcaagaataatccataaagagtctgatatc
atcactgcttttgcagtcaataaggcaaatcggaactgcattgcaatagcatcaagtcat
gatattcaagaattggatgtttctgcaattttagctacgcagatctatacctgggttgat
gatgatacagaaatagaaaataaaggggctgatgatttcctagttatacatgctcgtgat
gatctggtaaatgttcagggaaccactccttatactcatagtaatcctggcacacctatc
aatatgccttggcttggtagtacacaaactggcaggggtgcatctgtggaatattccaat
aaatttaatggaatcagaaaggaattggcaagaaaagagatgctcaagaaagctattaat
aatgtcagaagaatggcttctcatccaacactgccatattacctgacaggtgctcaagat
ggtagtgtaagaatgtttgaatggggtcatgcacaacaaatcacatgttttcgatctggt
ggcaactcaagggtaactcgaatgagattcaattaccaaggaaataagtttggaattgtt
gatgctgatggatatataagtttatatcagacaaattggaaatgttgtccacttactgga
acttcacctaagccatatttgacatggcagtgtcataacaaaacagccaatgactttgtt
ttcgtcagttcatcatctttgatagctacagcaggattttcttctgacaacagaaatatt
tgtctttgggatactctggtttctcctacaaatagcttggtgcatgcttttatctgtcat
gatagtggagcaactgtgctagcatatgctccaaaacaccagctgttaatatctggaggc
agaaaaggttttacctgtataattgatcttcgccaaaagcagcagcaacagttactccag
agtcatgattctccagtcaaagcaattgctgttgatcctgcagaggagtattttgtcaca
ggatctgctgaaggcaacataaaggtatggagtctgtctacatttaatcttcttcacact
ttcatcaatgagcatgctcgacagtctctcttcagaaacattgggacaggagtcatgcaa
attgagacaggaccagcaaatcacatattctcctgtggtgctgatggaacagtaaagatg
agaatcttgcctgatagattcagccctttaaaggatgtgttaaaaaatgatgtgaagttt
atgatctaa

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