Corvus cornix (hooded crow): 104690455
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Entry
104690455 CDS
T03546
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
ccw
Corvus cornix (hooded crow)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SNCAIP_SNCA_bd
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
104690455
NCBI-ProteinID:
XP_039423249
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All DBs
Position
Z:complement(47714168..47802405)
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AA seq
964 aa
AA seq
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MEAPEYLDLDEIDFSDDVSYSVTSLKTIPELCRRCDSQNEDRSVSSSSWNCGVSTLLGNA
QKPTGITDVCNKFRPVKRVSPLKHQPESSENNESDDQENQKGEYQKGSDSQSSPPNDDQS
PGEGESLKSKSTEPAVLLGELEHYDLDMDEILDVPYIKSSQQPVPFTKVAPEKKLLSVCS
TMNGLSGKSCPAGSTESSPAGGTQFCVLSPVKGAQLRKMQPIVLDQHKHSAEELELSQPL
VKCSSAHESEAQGKGFLSRTLVDPHAHKAEKSMPNCHRRTFHLQTAVAESKQLEELSMNW
SSAGGPEERSEEVKKIKSILNIVKEGQISLLPHLAADNLDKIHDECDNNLLHVAASKGHA
ECLQHLTSLMGEDCLNERNIEQLTPAGLAIKSGQLECVRWMVSETEAIAELSCSKDHPSL
IHYAGCYGQEKILLWLLQFMQEQGISLDEVDQDGNTAVHIAAQHGYLGCIQTLVEYGANV
TMQNHVGEKPSQSAERHGHTMCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQNQL
QQLLEAQRSEGKSLPTSPSLPSSPSSGKPQWKPSEADELSPPKSKLSTQDSIQILGSLGT
SSRARSKIKDEDSDKILRQLLGKEISENVCMQEKLTLEFQDAHASSKNVKKILPEKRELK
LARLRQLMQRSLSESDTDSANSEEHKNTPVKRTDKPRPQPIVESVESTESLNMMLKKHTS
TAGRRFPFGIRVSKSVDGHSPSPTSESSDADNEAPYQSGTVPQNQFCEDNPPSSTDSATA
QKVATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQVELAESELNEEKDKDRSKGLTRAP
ASSGEYAGDQLKRPFGTFRSIMETLSGNQNNNNNCQTANLIKTSSTLPFTSLGRKTTESK
GNPAVVSKGRTKTDPYFSYTSLSSCTLNEELLCNYAWHDDINWKIQKSESQNSAEEPELQ
EFFL
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctgaataccttgatttggatgaaatagattttagtgatgatgtatcgtat
tctgtaacttctctcaagaccatcccagaattatgtagaaggtgtgattcacaaaatgaa
gacagatcagtttccagcagcagctggaactgtggggtctcaactcttcttggaaatgca
cagaaaccaacaggaattacagatgtgtgcaataaattcagaccagtgaagagagtttcc
ccattaaagcatcagccagaaagctctgagaacaatgaaagtgatgaccaggagaaccag
aagggagaataccagaaaggcagtgattctcagtcttcacctccaaatgatgaccagagt
ccaggagaaggagagagccttaaaagcaaaagcacagaacctgctgttctgcttggggag
ctggagcactatgacctggatatggatgagattttggatgtgccttacattaaatcaagt
cagcaacctgttccttttacaaaggtagctcctgagaaaaaacttttgagtgtgtgttca
accatgaatggtctaagtggcaagagctgtcctgcagggagcacagagagctcgcctgct
ggcgggacacagttctgtgtgctgtctcctgtgaaaggcgctcagctgagaaaaatgcag
cccattgtcctcgatcagcacaagcattcagcagaagaattagagctttcccagccttta
gttaagtgtagctcagcccatgaatctgaagcccaaggcaagggcttcctcagcaggaca
cttgttgatcctcatgctcacaaagctgagaagagtatgccgaactgccaccggaggact
ttccacctgcagacggcagtggcagaaagcaagcagctagaggaactgagcatgaactgg
agcagcgcagggggcccagaagagaggagcgaagaggtgaaaaaaattaagagcatctta
aatattgtaaaggaaggccaaatctctttgctgccacatttagcagcagataatctggat
aagatccatgatgaatgtgacaacaatctgttgcatgtagcagcatcaaagggacatgca
gaatgcctgcagcatctcacttctttgatgggtgaagactgtttgaatgaacgaaatatt
gagcagctaactccagctggattagcaataaagagtggtcagctggagtgtgttcgatgg
atggtgagtgaaacagaagctattgcggaactcagttgctcaaaagaccacccaagcctt
atccattatgcaggttgctatggccaggagaaaattcttctgtggcttcttcagtttatg
caagaacaagggatttcactggatgaagttgaccaggacggaaacactgctgttcacata
gctgctcaacatggctatctaggatgcatacagacattggttgaatatggagcaaatgtc
accatgcaaaaccacgtgggagagaagccatcacaaagtgctgagcgacacgggcacacc
atgtgttcccgctacttagtagttgtggagacatgtatgtcgctggcctcccaggttgtc
aagctgactaagcagctgaaggagcagactgtggaacgtgtaacattacagaaccaactc
cagcagctcttagaagcccagcggtcggagggcaagtcactgcccacgtccccaagcttg
ccgtcatctccttcttctggcaaaccccagtggaaaccatctgaagcagatgaattgtct
ccaccaaaaagtaaattgagcacccaagatagtattcagatccttggcagcttgggaaca
tctagtcgtgctcgatctaagataaaagatgaggactcagataaaatcttgcgccagttg
ttgggaaaagaaatctctgaaaatgtctgtatgcaggaaaagctgactttggaatttcag
gatgctcatgcatcctccaagaacgtgaagaagattttgccagagaaaagggagttgaag
ttagcccgactgagacaactgatgcagcggtctctcagtgagtctgatacagattcagct
aattctgaggagcacaagaacacccctgtgaaaagaactgacaaaccaagacctcagcct
atagtggagagcgttgagagcacagagagtttgaacatgatgcttaagaaacacacttcc
acagcaggacggcgctttccttttggtatcagggtctctaagtctgtggatggccacagt
ccttcccctacttcggagagcagcgatgcggataatgaagccccatatcagtctggtaca
gtacctcagaaccagttttgtgaggacaaccctccgtccagcacagacagtgccactgcc
cagaaggttgccaccagccctaagagtgctctcaagtccccatcttcaaagcgcagaacc
tctcaaaatttgaaacttcgagtaactttcgaggagcctgtggtgcaggtggaactagca
gagtcagaactaaatgaggaaaaggataaagaccggagcaaaggactcacgcgggctcca
gccagctctggggagtatgcaggagaccagctgaaaaggccttttggaacctttcggtcc
ataatggagacactgagtggcaaccaaaataacaacaacaactgtcaaacagcaaacctc
atcaaaacctcctcaacactgccttttacctcactaggaaggaagacaacagaaagcaag
ggaaatccagcagttgtctcaaaaggaagaaccaagacagatccttacttcagctacacc
agtctttcttcttgcacgctgaatgaagaacttctgtgtaactatgcttggcatgatgac
atcaactggaaaatccagaaatctgagagtcaaaacagtgctgaagagccagagctgcag
gaattcttcctctaa
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