Corvus cornix (hooded crow): 104690813
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Entry
104690813 CDS
T03546
Symbol
SMYD1
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00310
Lysine degradation
ccw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104690813 (SMYD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104690813 (SMYD1)
Enzymes [BR:
ccw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
104690813 (SMYD1)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
104690813 (SMYD1)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104690813 (SMYD1)
BRITE hierarchy
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GFIT
Motif
Pfam:
zf-MYND
SET
TPR_12
Motif
Other DBs
NCBI-GeneID:
104690813
NCBI-ProteinID:
XP_010400391
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Position
4:67842219..67867626
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AA seq
491 aa
AA seq
DB search
MTKGGMESVEVFTTEGKGRGLKAQKEFLPGDVIFAEPAYAAVVFDSLIHVICHTCFKRQE
RLHRCGQCKFAYYCDRTCQRAAWLNHKNECSAIKRHGKAPTENIRLAARILWKIEREGSG
LSEGCLVSIDELQNHVDSFGEEEKKELRMDVESFLEFWPPHCQQFGMQFISHIFGVISCN
GFTLSDQRGLQAVGVGIFPNLCQANHDCWPNCTVVFNNGNHEAVRSMFHTQMRIELRALS
KISPGDELTVSYVDFLNLSEERRKQLKKQYYFDCTCEHCKKQLKDDLMLAVKAGESKPSA
DTVKEVIQLSKDTLEKINKARMEGHYHEVVKLCRDCLAKQEPVLGDTNIYLLRILSIASE
VLSYLQMFEEAADYAKRMVDGYLKIYHPNNAQLGMAVMRAGVTHWHAGLIEAGHGLICKA
YAILLITHGPSHPITKDLEVMRVQTEMELRMFQQNEFMYYKMREAALKNQKIQVMPEPSN
ENAPSLFHKKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaggaggaatggagtcagtggaagtgttcacaactgaaggcaaaggcaggggt
ttgaaagcccagaaggaattcttgcctggggatgtcatctttgcagagccagcctatgca
gccgtggtttttgacagcctgatacacgtcatctgtcacacctgcttcaagcggcaggag
aggctccaccgctgtgggcagtgcaagtttgcctattactgcgacaggacctgccagaga
gcggcctggctcaaccacaaaaatgagtgctctgccatcaagaggcacggcaaggcaccc
accgaaaacatcaggctggctgcccgcatcctgtggaagatcgagagggagggcagtggg
ctgtccgagggctgcctggtgtccattgatgagctgcagaaccacgtggacagctttggc
gaggaggagaagaaggagctgcgcatggacgtggagagtttcctggagttctggccaccc
cactgccagcagtttgggatgcagttcatctcccacatattcggagtgatcagctgcaat
ggctttaccctcagtgaccaaagaggactgcaggctgttggtgtgggaatcttccccaac
ctctgccaggccaaccacgactgctggcccaactgcactgttgtcttcaacaatggcaat
catgaggctgtaagatcaatgttccacacacagatgaggatcgagctgcgggctctgagc
aagatttctccaggggatgagctcactgtttcctacgtggatttcctcaacctgagcgag
gagcggcggaagcagctgaagaagcaatattacttcgactgcacgtgcgagcactgcaag
aaacagctcaaggatgacctgatgctggcagtgaaggcgggggaaagcaagccctctgca
gacacggtgaaggaggtgatccagctctccaaggacacgctggagaagatcaacaaggcc
cgcatggagggacattaccacgaggttgtgaagctgtgccgtgactgcctggcaaaacag
gagcctgtgctgggggacacgaacatctacctgctgaggatcctcagcattgcctccgag
gtgctctcctacctccagatgtttgaggaagcagctgactacgccaagaggatggtggat
ggctacctgaaaatataccatcccaacaatgcgcagctggggatggccgtgatgcgggca
ggagtgactcactggcatgctggcctcattgaagctggccatggcttgatctgtaaagcc
tatgccattctcctgataacccatggaccttcccacccaattaccaaagacctggaggtc
atgcgtgtccagacggagatggagctgcgcatgttccagcagaatgagttcatgtattac
aagatgagggaagctgccctcaaaaaccagaagatccaggtcatgcctgaacccagcaat
gagaatgcaccaagcctcttccacaaaaaggaataa
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