Corvus cornix (hooded crow): 104690896
Help
Entry
104690896 CDS
T03546
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccw00536
]
104690896 (SLIT2)
Glycosaminoglycan binding proteins [BR:
ccw00536
]
Heparan sulfate / Heparin
Axon guidance molecules
104690896 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
LRR_1
hEGF
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_3
Motif
Other DBs
NCBI-GeneID:
104690896
NCBI-ProteinID:
XP_039406909
LinkDB
All DBs
Position
4:complement(56445232..56708540)
Genome browser
AA seq
1558 aa
AA seq
DB search
MMCGWGKLTLSLGLLLAMAGAVAPQPCPAQCSCSGSTVDCHGLALRGVPRNIPRNTERLD
LNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSEL
LFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLT
LNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSH
LRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPTACTCSNNIVDCRGKGLTEIPTN
LPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYG
NKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS
PLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFR
CSAKEQYFIPGVHHFGCTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHI
PQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTS
NRLESVQHKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFD
TLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFT
CDDGNDDNSCSPLARCPAECTCLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPK
ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLS
LHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGE
MADKLLLTTPSKKFTCQEIPGPCGFLIPGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDF
YRCTCPYGFKGQDCDIPIHACISNPCHHGGTCHLKEGEKDGFWCTCADGFEGENCEVNVD
DCEDNDCENNSTCVDGINNYTCLCPPEYTAANLNEVEKGELCEEKLDFCAQNLNPCQHDS
KCILTPKGYKCDCTPGYVGEHCDIDFDDCQDNKCKNGAQCTDAVNGYTCICPEGYSGLFC
EFSPPMVLPRTSPCDNYECQNGAQCIIKESEPICQCLSGYQGEKCEKLISINFINKESYL
QIPSAKIRPQTNITLQIATDEDSGILLYKGDKDHIAVELYRGRVRVSYDTGSYPASAIYS
VETINDGNFHIVELLAMDQILSLSIDGGSPKIITNLSKQSTLNFDSPLYVGGMPVKNNIA
ALRQSPGQNGTSFHGCIRNLYINSELQDFRNVPLQVGILPGCEPCHKKVCVHGTCHATSQ
SGFSCECEGGWTGPLCDQQTNDPCLGNKCVHGTCLPINAFSYSCKCLQGHGGVLCDEEEM
LFNPCQSIRCKHGKCRLSGLGKAYCECGSGYTGDSCDKEISCRGERVRDYYQKQQGYAAC
QTTKKVSRLECKGGCSAGQCCGPLRSKRRKYSFECTDGSSFVDEVEKVVKCGCTSCPS
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcggctgggggaagctcaccctgtccctggggctgctgctggcgatggcgggc
gcggtggcgccgcagccgtgcccggcgcagtgctcctgctcggggagcaccgtggactgt
cacgggctggcgctgcgcggcgtcccgaggaacatcccccgcaacaccgagaggctggat
cttaatggaaataacatcacaagaatcacgaagactgactttgctggtctaaggcacctt
cgagttcttcagctcatggagaacaagattagtactattgagagaggagcattccaggat
ttaaaagaactggagaggctgcgcctaaacagaaataacctccagttgctttctgaactg
ctctttctggggacaccgaagttatacaggcttgatcttagtgaaaatcagattcaagca
ataccaaggaaggcattccgaggagcagtagacataaaaaatctgcaactggattacaac
cagatcagctgtattgaagatggggcatttagggctctgcgtgacctggaagtgctcact
ctcaacaataacaacatcactcgactgtctgtggcaagtttcaaccatatgcccaaactc
agaacattccgccttcactccaacaacctgtactgcgattgccacctggcctggctgtcg
gactggctgcggcagcggccgcgggtcgggctctacacgcagtgcatggggccctcgcac
ctccgcggccacaacgtagccgaggtccagaagcgcgagtttgtctgcagcgatgaggaa
gaaggtcaccagtcctttatggctccatcctgcagtgtcttgcactgccctactgcatgc
acctgtagtaacaacattgtggactgtcgtgggaaaggccttactgagatcccaacgaac
cttccagaaaccattactgaaatacgcttggaacaaaattcaattaaggtcatacctcct
ggagctttctccccctataaaaagcttcgaagaattgacctgagtaataaccagatctct
gaagcagctccagatgctttccagggcttacgttcactcaattcactagtcctctatggc
aataaaatcacagaacttccaaagggcctgtttgaaggactcttttctctgcaactgcta
ttactgaatgccaacaagatcaattgtctacgagttgatgcatttcaagatctgcacaac
ttgaatcttctttctttgtatgacaacaagcttcagaccattgcaaaaggcaccttctca
cccctacgtgcgattcagaccttgcatttggctcagaacccatttatctgtgactgccat
ctgaagtggctggcggattatcttcacacaaaccccattgagaccagtggtgcccgttgc
accagcccccgccgtctggcaaacaaaaggatcggccagatcaaaagcaagaaattccgc
tgctcagctaaagaacagtatttcattccaggagttcaccattttggctgcactgaagat
tacagatccaaattaagtggagactgctttgcagatttggcctgccctgagaaatgtcgc
tgtgaagggaccacagtggactgctccaatcagaaactcaacaaaattcctgatcacatc
ccccagtacacagcagagttgcgactaaataacaatgaattttcagtcctggaagctact
ggaatctttaagaaacttcctcagctgcgtaaaataaacctgagcaataacaagattaca
gatatagaagaaggagcatttgatggagcctctggtgtgaatgaactcttgctcacaagc
aaccgcttggaaagtgttcaacacaaaatgttcaaaggactagaaagtctcaaaacactg
atgctgaggagcaacagggtgagctgtgtgggaaacgacagcttcacagggctgagctct
gtccgcctgctctctctgtatgacaaccagatcaccactgtggcgcccggctccttcgac
acgctgcattcgctctctacgctaaacctcttggccaatcccttcaactgcaactgccat
ctcgcatggcttggagactggctaaggaagaaacgcattgtgacggggaaccctcgctgc
caaaaaccctacttcctcaaagagattcctatccaggatgtggcaattcaggattttaca
tgtgatgatggaaatgatgacaatagctgctctcccctggcccgctgccctgcagaatgt
acttgtctggacacagtagttcgctgcagcaacaaaggtctgaaagccttgcctaaaggc
atcccaaaagatgtaactgaactatatttggatggaaatcagtttacccttgttccaaaa
gagctttccaactacaagcatttaacactcatagatttaagtaacaacagaatcagcact
ctttctaatcagagcttcagcaacatgactcagctgctcaccttaattcttagttacaac
cgcctaagatgtatccctgcacggactttcgatgggctgaaatcacttaggttgttgtct
ttacatggcaatgatatttctgttgttcctgaaggagcctttaatgatctttcagcatta
tcacacctggctattggagcaaatcctctttattgtgattgtaacatgcagtggctatct
gactgggtaaaatcagaatacaaagaacctggtattgcacgttgtgctggtcctggagaa
atggcagataaacttcttctcacaactccttctaagaaatttacttgccaagagattcca
gggccttgtggttttctgataccagggcctgtggatgttaatattcttgcaaagtgtaat
ccctgtttatcaaatccgtgtaaaaatgatggaacctgcaataatgatccagttgacttc
tacagatgtacatgcccatatggtttcaagggtcaagactgtgatattcccattcatgct
tgcattagtaacccgtgccaccatggtggaacttgtcacttgaaagaaggagaaaaagat
ggtttctggtgcacttgtgcagacggatttgaaggtgaaaactgtgaagtaaatgttgat
gactgtgaagacaatgactgtgaaaacaattctacttgtgtggatggaattaataactat
acttgcctttgtccacctgaatatacagctgctaatctgaatgaagtggaaaaaggtgaa
ctctgtgaggagaaattagatttctgtgcccaaaacctgaatccttgccagcatgattca
aagtgtatcttgacacccaaaggatacaaatgtgattgcacacctggatatgtaggtgag
cattgtgatattgactttgatgactgccaagacaacaaatgcaaaaatggagcgcagtgc
actgacgcagttaatggatatacatgcatttgtccagaaggatacagtggcttgttttgt
gaattttcaccaccaatggttctacctcgcaccagcccttgtgataattatgaatgtcaa
aatggagcccagtgtatcataaaagaaagtgaaccaatttgtcagtgtttatcaggctac
cagggtgagaaatgtgaaaagttgattagtataaacttcatcaacaaagaatcctatctg
caaatcccttcagctaagatacgcccccagaccaatatcactctacagattgccacagat
gaagacagtgggatcctgctgtacaaaggtgataaagatcatatagcagtggaactgtac
cggggtagagtgagggtcagctatgacacaggatcatatccagcctctgctatttacagt
gtggaaacaattaatgatggcaatttccacattgtggagctactagctatggatcagatt
ctatctttatctattgatggaggaagtcccaagataattaccaatttgtccaagcaatcc
actctgaattttgattctccgctgtatgtgggaggcatgcctgtgaaaaataacatagca
gctttacgccagtccccagggcagaatggcactagcttccatggctgcatccgtaatcta
tatatcaacagtgaactccaggacttcagaaatgtgccactgcaagtgggaattctgcca
ggttgtgagccttgtcataagaaagtttgtgtgcatggaacatgccatgctaccagccag
tcaggcttttcctgtgagtgcgaaggaggatggaccggacctctctgtgatcaacaaact
aacgacccatgtcttggaaataaatgtgtgcatggtacctgcttgccgatcaatgcattt
tcatacagttgtaaatgcctgcagggacatgggggagtcctctgtgatgaagaggaaatg
ctgtttaacccctgccaatccatcaggtgtaaacatggcaaatgtaggctttcaggactt
gggaaagcatattgcgaatgcggcagcggatacacgggggacagttgtgataaagaaatc
tcttgtcgaggggaacgagtccgagattactaccaaaagcagcaagggtatgctgcgtgc
cagacgaccaagaaggtatcgagactagaatgtaaaggcgggtgctcagccgggcagtgc
tgtgggccactacggagcaagagacggaaatactccttcgaatgcactgacgggtcgtca
tttgtggacgaggttgaaaaagtggtgaagtgtggctgtacaagttgtccctcctaa
DBGET
integrated database retrieval system
