Corvus cornix (hooded crow): 104690931
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Entry
104690931 CDS
T03546
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04620
Toll-like receptor signaling pathway
ccw04621
NOD-like receptor signaling pathway
ccw04622
RIG-I-like receptor signaling pathway
ccw04623
Cytosolic DNA-sensing pathway
ccw05164
Influenza A
ccw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104690931 (IRF7)
04621 NOD-like receptor signaling pathway
104690931 (IRF7)
04622 RIG-I-like receptor signaling pathway
104690931 (IRF7)
04623 Cytosolic DNA-sensing pathway
104690931 (IRF7)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104690931 (IRF7)
05168 Herpes simplex virus 1 infection
104690931 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104690931 (IRF7)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
104690931 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
104690931
NCBI-ProteinID:
XP_010400558
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All DBs
Position
5:complement(45611327..45621646)
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AA seq
516 aa
AA seq
DB search
MAAPEKEGEAQKLRFGQWLLNAISSGSYRGLCWIDPGHTTFRVPWKHNARKDITSSDVEV
FKAWAQVSGRYEEGSEDLAKWKTNFRCALSSTQMFKLEDDHSKRGDDPHKVFSIISATLQ
HSKEGDSSVPNPVVDQQPAQQQLQLEHDSQDMASAIAVPGPTDPQLSILEELLQQCDISP
RDLGSLAQSWVPTGGFPAGDSPHQDVMLQPHQDTLLQLYADPSQNNCFPPTTFPQWVPPV
EQPTLDTYHPPGLMPPEETGAMPLPCHLTEGTGPTQYPAEATFFVPAASPVPQPRLLLDN
TDGIVSILDVTIYYRGKEFHREVVGGSHCLLTYQPPSLLEAPCPWHVVRFPSPASVADSK
QRRLTEELLGVAGLQLEQRADKVFATRREKCKVFWALSQQLEGVEEPPPNLLCRDQETPI
FDFHEFCTELRDFRNGQRQRSPDFTIYLCFGQAFSKDRPKESKLILVKLVPKFCEYYYEQ
VLQEGASSLDSHTLSLQLSNSFDLMELIEQYNMQLG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccggagaaggagggggaagcccagaagctgcggttcgggcagtggctgctg
aacgccatcagcagcgggagctacagggggctgtgctggatcgaccctggccataccacc
tttcgcgtcccctggaaacacaacgccaggaaggacatcaccagcagtgacgtggaggtc
ttcaaggcctgggcgcaggtcagtgggcggtatgaggaaggctccgaggacctggccaag
tggaagaccaacttccgctgtgccctgagcagcacccaaatgttcaagctggaagatgac
cattccaagcgtggtgatgacccacacaaggtcttctccattatctcagccaccctccag
cacagcaaggagggagattccagcgttcctaaccctgtggtggaccaacagccagcacaa
cagcagctccagctggagcatgactcccaagacatggcctcagcaatcgctgtcccagga
cctactgacccacagctctcgattctggaggagctgctgcagcagtgtgacatctccccc
cgtgaccttggctcactggcccagtcctgggtgcccacaggtggtttccctgcaggggac
agtccccaccaggatgtcatgctccagcctcaccaggacaccctgctccagctttatgca
gaccccagccaaaacaactgcttccctcccacgacatttccacaatgggttcccccggtg
gagcagcccaccttggacacctaccacccaccgggcctcatgccaccagaggagacaggg
gccatgccactgccgtgccacctgacagagggcacgggccccacgcagtacccagcggag
gcaacgttctttgtccctgctgccagccctgtgccacagccacggctgctgctggataac
acagatggcatcgtctccatcctggatgtcaccatctactaccgggggaaggagttccac
cgggaggtggttgggggcagccactgcttgctgacataccagccccccagtctgctggag
gccccgtgcccctggcacgtggtgcgcttccccagccccgccagcgtggctgacagcaag
cagcggcgcctcaccgaggagctgctgggcgtcgcggggctgcagctggagcaacgcgcc
gacaaggtctttgccacccgccgggagaagtgcaaggtgttctgggccttgtcccagcag
ctcgagggggttgaggagcccccacccaacctgctctgccgggaccaggaaacacccatc
tttgacttccatgagttttgcacagagctgagggacttccgcaatggccaaaggcagcga
tcccctgacttcaccatctacctctgctttgggcaggccttctccaaggacaggcctaag
gagtccaagctcatcctggtcaagctggtgcccaagttctgcgagtactactatgagcag
gtgctgcaggagggagcctcctcccttgacagccacaccctcagcctgcagctctccaac
tccttcgacctcatggagctcatcgagcagtacaacatgcaactgggctga
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