Corvus cornix (hooded crow): 104691007
Help
Entry
104691007 CDS
T03546
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04142
Lysosome
ccw04144
Endocytosis
ccw05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104691007 (CLTC)
04142 Lysosome
104691007 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104691007 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104691007 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccw04147
]
104691007 (CLTC)
Membrane trafficking [BR:
ccw04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104691007 (CLTC)
Exosome [BR:
ccw04147
]
Exosomal proteins
Proteins found in most exosomes
104691007 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
104691007
NCBI-ProteinID:
XP_039418770
LinkDB
All DBs
Position
19:8449741..8479909
Genome browser
AA seq
1687 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKDAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQSDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIV
NFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKDMYQEAKLTDQLPLI
IVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILV
VRGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLR
ENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPEL
WASVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDN
SVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKF
DVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPS
SYMEVVQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNN
AHIQQVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKE
VCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMG
MFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAI
ITMMNHPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLMVLSPRLDHTRA
VTFFTKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISL
AQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQ
WFLQENKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKE
KVDKLDASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQ
PGFGYSM
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgcccatccgcttccaggagcatctccagctccaaaatctgggcatc
aacccagcaaacattgggttcagcactctgacaatggagtctgacaaattcatctgcatc
agagagaaagtaggagaacaggctcaagtggtgatcattgacatgaatgaccccagcaac
ccaatccgaagacccatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcattaaaagatgctgggaaaacgctgcaaatcttcaacattgaaatgaagagcaagatg
aaggctcacaccatgacagatgatgtcaccttctggaagtggatctctctgaacactgtt
gcccttgtgacggataatgcagtttaccactggagcatggagggggagtcccagcctgtg
aagatgtttgatcgccactccagccttgctggctgccagatcatcaactacaggactgat
gccaagcagaaatggctcctgctgactggaatatctgcacagcaaaaccgtgtagtggga
gcaatgcagctgtactctgtggacagaaaagtgtcacagcccatcgagggacatgcagcc
agctttgcacagttcaagatggaagggaatgctgaagaatccactctcttctgttttgca
gtaagagggcaagctgggggtaagctgcatatcattgaggttggcacaccacccactggg
aatcagccctttccaaagaaagctgtggatgtcttctttcctcctgaagcacaaagtgac
tttcctgttgctatgcagatcagtgacaagcacgatgtggtgttcctcataacaaagtat
ggctacatccacttgtatgacctggaaactggcacctgtatctacatgaacaggatcagt
ggagagaccatttttgttactgcacagcacgaagcaacagctggaattattggagtaaac
agaaagggacaagtgctctcagtgtgtgtggaagaggagaacatcattccctacatcaca
aacgtgctgcagaatcctgacctggctttacggatggctgtccgcaacaacctggcgggg
gccgaggagctctttgccagaaaattcaatgcactctttgcacaagggaactactcagag
gcagcaaaagtggcagctaatgccccaaagggaatcctgcgtactccagacaccatacgc
cggttccagagtgttccagctcagccagggcagacttcccctctcctgcagtattttggc
attctgctggaccaagggcagctgaacaagtatgagtcactggagctctgcagaccagtg
ctccagcagggccgcaagcagctcttggaaaaatggttaaaagaagataagctggagtgc
tcggaggagctgggagaccttgtgaaatccgtagatcccacgctagcacttagtgtctat
ctgagagccaacgttccaaacaaggtcatccagtgttttgctgaaaccggacaagtccag
aagattgttttgtatgctaagaaggttggatatactccagactggatttttttgctgagg
aatgtaatgagaatcagccctgatcaaggacagcagtttgcacaaatgctcgttcaagat
gaagagcctcttgcagatataacacagattgtggatgtctttatggaatataatttaatc
cagcaatgtacagcctttctgctggatgcactgaagaataatcgtccctcagaaggtccc
ctgcaaacacgtttacttgagatgaacctcatgcacgcacctcaggttgcagatgccatc
ctgggaaaccaaatgtttactcactatgaccgggctcacatagctcagctgtgtgagaag
gctggtttgctgcagagagcactcgagcacttcacagacctgtacgacatcaagcgtgcg
gtagttcacactcacctcctcaatcctgagtggttagtgaattattttgggtccttatca
gtagaagactctctggagtgtctgcgtgcgatgttgtccgctaacatccgtcagaacctg
cagatctgtgtccaggtagcttccaaataccatgagcagctgtcaacacagtcactcatt
gagctctttgagtccttcaagagctttgaaggtttgttttacttcctgggctccattgta
aacttcagccaggatccagatgtgcacttcaagtacattcaagctgcatgcaagacagga
caaattaaagaagtggaaagaatctgcagggaaagtaactgctatgatccagaacgtgtt
aaaaacttcctcaaggacatgtaccaggaagctaaacttactgaccagctgcctctcatc
attgtgtgcgaccgctttgactttgtccacgacttggtgctgtatttgtatagaaataat
ctccaaaaatatattgagatttatgtacagaaggtgaatccaagccgtctgccagttgtt
attgggggactgcttgatgtggattgctctgaagatgtgataaagaacctcatccttgta
gtgagaggtcaattttcgaccgatgaacttgttgcagaggttgagaaaagaaacaggctg
aagctgcttctgccctggctggaagcaagaattcacgagggctgtgaggagcctgccact
cacaatgcactggccaagatatacattgacagcaacaacaacccagagagattcctgcgg
gagaatccctactatgacagtcgtgttgttggcaagtactgtgagaagagggaccctcac
ctggcctgtgtggcttacgagcgtggacagtgcgatctggagcttattaatgtgtgcaat
gagaactccctcttcaagagtctctcccgctacttagttcgtcgtaaagaccccgagctc
tgggccagtgtgctactggaaagcaacccctacagaagacccctgattgaccaggttgtc
cagactgcgctgtcggagacccaggaccccgaggaagtctctgtcactgtgaaggctttc
atgactgcagatcttcccaatgagctcattgaactgctggagaaaatagttctggataac
tccgtgttcagtgagcacaggaatctgcagaaccttctcatccttacagctatcaaggct
gaccgcacccgtgtcatggagtacatcaatcgcctggataactacgatgcccctgatata
gccaatattgctatcagcaacgagcttttcgaggaggcatttgctatcttcaggaagttt
gatgtcaatacatcagctgtgcaggtgttgatagagcacattgggaacctggaccgtgca
tacgagttcgctgagcgctgcaatgaacctgcagtgtggagccagctggccaaagcacag
ctccagaaggggatggtaaaggaagcgattgactcctacattaaagcagatgatccttcc
tcatacatggaagttgttcaagctgctaatgccagtggaaactgggaagaactggtaaag
tacctccagatggcacgcaagaaggcccgggagtcgtatgtggaaacagaattaatcttc
gctcttgctaaaacaaaccgcctggcagagctcgaggagttcatcaatggacccaacaat
gcacatatccagcaggttggtgatcgctgttatgatgagaagatgtatgaagcagccaaa
ctgttgtacaacaacgtgtccaactttggccgtttggcctccactttagtgcacctgggc
gagtaccaggcagccgtggatggtgctcggaaagccaacagcactcgcacgtggaaagag
gtttgcttcgcttgtgtggatggaaaagaattccgcctggctcagatgtgtgggctccac
attgtggtgcatgcagatgagctggaagaactaatcaactattaccaggatcgtggctac
tttgaagagctgatcactatgttggaagcagcacttggactggagcgagcacacatggga
atgttcacagagctggcaattctctactccaagttcaagccacagaagatgagggagcac
ttggagctgttctggtccagagtcaacattcctaaggttctgagagctgcagaacaagcc
catctctgggctgaactggtgttcctgtatgataagtatgaagaatatgataatgccata
atcacaatgatgaatcacccaacagatgcttggaaagaaggccagttcaaagatatcatc
actaaggtggccaatgtggagctgtactacaaggcaattcagttctatttggaatttaag
cctctcttgctcaatgatctgctgatggtgttgtcccctcggcttgaccacactcgtgct
gtcaccttcttcacaaaggttaaacagctgcccctggttaagccttacctgcgctctgtt
cagaatcacaacaacaaatcagtcaatgagtccctcaacaacctcttcattattgaagaa
gactaccaggctcttaggacttctatagatgcttatgacaactttgacaacatttctctt
gcccaacgtttggagaagcacgagctaatagagttccgaagaatcgctgcctatctcttc
aaaggcaacaaccgctggaaacagagtgtggagctctgtaagaaggacaggctgtacaag
gatgcgatgcagtacgcttctgaatccaaagataccgagctggcagaagagctgctgcag
tggttcctgcaggagaacaagagggaatgctttggtgcttgtctcttcacctgctacgat
ctcctaaggccggatgttgtcttggaaacagcgtggaggcacaacattatggactttgcc
atgccatactttattcaggtcatgaaggaatacttgaccaaggttgatgcaataaaggaa
aaggtggataaactggatgcatcagagtctttgagaaaggaagaggaacaagctacagaa
acacaacctattgtttatggccagccccagctgatgttgacagcgggacccagtgtggca
gttcctccgcaggcaccttttggctacggctacacggcccctccgtacgggcagccacag
cccggctttggctacagcatgtga
DBGET
integrated database retrieval system
