Corvus cornix (hooded crow): 104691027
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Entry
104691027 CDS
T03546
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104691027 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccw04040
]
104691027 (TRPV1)
Ion channels [BR:
ccw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104691027 (TRPV1)
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GFIT
Motif
Pfam:
Ank
Ank_2
YVC1_C
Ion_trans
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
104691027
NCBI-ProteinID:
XP_010400684
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Position
19:7760690..7772694
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AA seq
844 aa
AA seq
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MSSILGKMKKFGSFDMEESEVTDEHTEGEDSVQEAPDNPQGPLSTKVQPPKSNIFARRGR
FVMGDSDKDMAPMDSFYQMDHLMAPSVIKFHVNMERGKFHKLLSTDSITGCSEKAFKFYD
RRRIFDAVAQGNTKDLSDLLLYLNRTFKHLTDEEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKSGFYFGELPLSLAACTNQLCIVKFLLENPYQAANITAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEILAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTMHIIILTAAAYYRPVQKNEKPPFTFGYSTGEY
FRVTGEILSVLGGLYFFFRGIQYFVQRRPSLKTLIVDGYSEVLFFVHSLLLLSSVVLYFC
GQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEDDNEGQDINISDHARCCHVKRGRTSYNSLYYTCLELFKFTIGMGDLEFTENY
RFKSVFVILLVLYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILDIENSYL
NCLRRSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGDLRRNP
SFSIRPGRVSGKHWKTLVPLLKDGEKRREETQKLPEEVKLKPVLEPYFEPEGSEVLKESI
PKSV
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccattcttgggaagatgaagaagtttggcagttttgacatggaggaatctgaa
gtgacagatgaacacacagaaggggaggactctgtccaggaagcccctgacaacccccag
ggcccactcagcaccaaggtgcagccacccaaaagcaacatctttgcaagacggggccgc
ttcgtgatgggagacagtgacaaggacatggctcccatggactccttctaccagatggat
cacctgatggcaccttctgtcatcaaattccatgtgaatatggagaggggcaaatttcac
aagctcctatctacagattccatcacaggctgctcagaaaaagctttcaaattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaaaggacctcagtgacctgcta
ctctaccttaatagaaccttcaagcatctcacagatgaggagttcaaagagcctgaaact
gggaaaacctgtttgctgaaagccatgctgaatctacacgatgggaaaaatgataccatt
cccttgctgctggatattgcaaggaaaactggaactctgaaagagtttgttaatgcagaa
tatactgacaactactacaagggccagactgctcttcacatcgccatcgagaggaggaac
atgtacctggtgaagctcctggtccagaatggagcagatgttcatgccagagcctgtggg
gagttcttcaggaaaatcaaagggaaatctggcttttattttggggagctgcctttgtcc
ctggctgcctgcaccaaccagctctgcattgtgaaattcctcctggagaatccctaccag
gcagccaacatcactgctgaggactccatgggcaacatggtcctgcacacactggtggag
attgcagataacaccaaggataacaccaagtttgtaaccaagatgtataataacatattg
atccttggtgccaagatcaatcccatcctcaagctggaagaactcaccaacaagaaaggg
ctgactcctttaactctggcagccaaaacagggaagatagggattttcgcttacatcctc
agacgagagatcaaagaccccgagtgcagacacttgtccaggaagttcactgaatgggcc
tatggacctgtccactcctctctttatgacttgtcctgtatagacacctgtgagaaaaat
tcagtgcttgagattcttgcctacagcagtgagacaccaaaccgtcacgagatgctgctg
gtggagcctcttaacaggctgctgcaagacaagtgggaccggtttgtcaagcacttattt
tacttcaacttctttgtctacaccatgcacatcatcatcctcactgcagctgcttactac
agacctgtacagaagaatgaaaagcctcccttcacctttggttacagcactggggaatat
tttcgagtaactggagagatcctgagtgtactgggaggcctctacttttttttcagaggg
atccagtatttcgtgcagaggcgcccatccctcaagacactgatagttgatggctacagt
gaggttcttttctttgtccactccctgctcctcctgagctctgtggtgctgtacttctgt
ggccaggagctgtatgtggcttccatggtgttctccttggccctgggctgggccaacatg
ctctactacacccgtggcttccagcagatgggaatttactccgtcatgattgccaagatg
atccttagagatttatgtcgcttcatgtttgtctatcttgtattcctcttgggattttct
acagctgtggtgactttaattgaagatgacaatgaggggcaggacataaatatctctgac
catgcccggtgctgccacgtgaaacgaggccgcacctcctacaacagcctctactacacc
tgcctggagctcttcaagttcaccattggcatgggggacctggagttcacagagaactac
aggttcaagtctgtgtttgtcatccttctggttctctatgtcatcctcacctacatcctc
ctgctcaacatgctcattgcactgatgggggagactgtcaacaaaattgcacaggagagc
aagagcatctggaaactccagagagccatcacaatcctggacattgagaacagctacttg
aactgtctgaggcgctcgttccggtctgggaagcaagtcctggtggggatcacacctgat
ggccaagatgattacagatggtgcttcagggttgatgaagtgaactggtccacgtggaac
actaacctgggcataatcaatgaagaccctgggtactctggggacctcagacgaaatccc
agtttctctattaggcctggcagagtttcagggaagcactggaaaacattggttccactt
ttaaaagatggagagaagaggagagaagagactcagaagctgccagaagaagtcaaatta
aaacctgttttggaaccttattttgagccagaaggttctgaggtgttgaaagagtcaatt
ccgaagtcagtctaa
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