Corvus cornix (hooded crow): 104691058
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Entry
104691058 CDS
T03546
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104691058 (SUPT6H)
03036 Chromosome and associated proteins [BR:
ccw03036
]
104691058 (SUPT6H)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104691058 (SUPT6H)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
104691058 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
104691058
NCBI-ProteinID:
XP_039418792
LinkDB
All DBs
Position
19:6743867..6770821
Genome browser
AA seq
1723 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEELNLDDQDEQGNLKGFIND
DDDEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKM
SDDEDDEAEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAAQEEEEEEEEDESDIDD
FIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYEYE
DEETEGETRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLRSI
PVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSFSRKGPSTIQKIKEALN
FMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQAYQ
YEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKA
ARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQAAGLDGLAKKFGLTP
EQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREPLVR
QVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYMKNKPVKELRDDQFLKMSLAEDEA
LLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFLYV
QMAKELKNKLLVEAKEYVLKACSRKLYNWLKVAAYRPDQQVEEDDDFMDENQGKGIRVLG
IAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFLLNK
KPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSENEF
RDYPPLLRQAVSLARRIQDPLVEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYCEFI
NRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCHM
GPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDA
NPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPYRS
PNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQ
DNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVGMTV
HCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDMKRKQQRT
TYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHVDV
REEGKENAFSLGSMLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDKKKL
EELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFPT
VNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQM
FSAIAAVTGQGQNPNATPAQWGSSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSYSY
TTPSQPITTPQYQLQANTTPQSTQSQAQSQPSSSSRQRQQPKTNSHAAIDWGKMAEQWLQ
EKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcgtggagagtgaagcagaggagtcggaggaggagtacaaccaggatggg
gaggttgtacccagagtgaccaagaagtttgtagaggaagatgaggatgatgaggaagag
gaggagctgaaccttgatgatcaggatgagcaggggaacctgaaaggattcattaacgac
gatgacgatgaggaagaggaggaggaagccagtgactctggagactcagaggatgatgtt
gggcacaaaaagagaaagcgcacttttgatgaccgcctggaggatgatgacttcgacctc
attgaagaaaacttgggcgttaaagtcaaaagacaaaaattcaggcgtgtgcgaaaaatg
tctgatgatgaggacgatgaagcagaagattatggaaaggaagagcatgagaaggaagcc
attgctgaagaaatctttcaagatggtgaaggcgaggaaggaggggaagctgtggaagct
cctgttgctgcacaggaagaggaggaggaggaggaggaagatgaatctgacattgatgac
ttcattgtggatgatgatggacaacctctgaagaagccaaaatggagaaagaagcttcca
ggatacacagacgctgctttgcaggaagcccaggaaatctttggtgtggactttgactac
gatgaatttgagaagtacaacgagtacgatgaggagatggaggaggagtatgaatatgag
gatgaggaaaccgaaggggagacccgtgtgcggcccaaaaagacgaccaagaagcgcgtc
agtcgccgcagcatcttcgagatgtacgagcccagtgagctggagagcagccacctcacg
gaccaggacaacgagatccgcatgacagacatgcctgagaggttccagctgagatccatc
ccggtgaagagtgctgaagatgatgagctggaggaagaagctgactggatttacaggaat
gcatttgcaacacccaccatctccttgcaggagagttctgactaccttgaccgtggacaa
gccagcagcttcagccgcaaggggcccagcaccatccagaagattaaagaagccctgaat
ttcatgagaaatcagcattttgaggtgccgttcatcgccttctacagaaaggagtatgtg
gagccagagctgcacatcaacgacctgtggagggtctggcagtgggatgagaagtggacc
cagctgaagatccgcaagcagaacctgacacgactgtttgagaagatgcaggcctaccag
tatgaacaaatctctgctgacccagacaagcccttggctgatggaataagggccctggat
actactgacatggagaggctgaaggacgtgcagtccatggatgagctgaaggatgtgtac
aatcacttcctgctgtactatggcagagacatccccaagatgcagaacgctgccaaggcc
gctcgcaaaaagcagaagcgtatccgggaggatggtgaagaggaggaaggtgaaggggag
gatgcagaggatgatgagcagaaggggcctgagctgaagcaggcttcccgaagggatatg
tacaccatctgccaggcagctgggctggatggtctggctaagaaatttggtctgacacct
gagcagtttggagagaatctccgagacagttaccagcgtcacgagacagagcagttccct
gcagagcccctggagctggccaaggattatgtgtgtagtcaattcccaagcccagaagct
gtgctggaaggagctcggtacatggtggctttgcagatcgccagggagcccttggtcaga
caggtcctgagacagactttccaagaacgagctaaaatcaacatttcaccaaccaaaaag
gggaagaaggatattgatgaagcccactatgcctattcctttaaatacatgaagaacaag
cctgtgaaggagctgcgagatgaccagttcctgaaaatgagcctggcagaggacgaggca
ctgctcaccatagatatcagcattgacatgaaaggagtggagggttatggcagtgaccag
acatactttgaggaaatcaagcagttctattaccgggatgagttcagccaccaggtgcag
gagtggaatcggcagcgcaccatggccatcgagcgctccctcaaccagttcctctacgtg
cagatggccaaagagttaaagaacaagctgttggtggaggccaaggagtacgtcctcaag
gcttgcagccgcaaactgtacaactggctaaaggttgctgcgtacaggccagatcagcaa
gtggaggaagacgatgatttcatggatgaaaaccaagggaaagggatccgggtgctgggc
attgctttttcatcagccagggaccaccccgtgttttgtgccctcgttaatggcgagggt
gaggtgacagatttcctccgactgccacatttcacaaagagaaggaatgcctggcgtgag
gaagagagggaaaagaaggcccaggatattgaaaccttgaaaaaattcctcctgaacaag
aagcctcacgtggtgacaattgcaggcgagaacagggatgctcagatgctgatggaggat
gtgaagagaattgttcatgagctggaccaagggcagcagctgtcctcgatcggagtggag
ctggtggacaatgaactggccatcctctacatgaacagcaagaagtctgagaatgaattc
cgggattacccccctctgctgcgtcaggccgtgtccctcgctcgccgcatccaggacccc
cttgttgagttcgcccaggtctgcagctctgatgaggatattctctgcctgaaactccac
cctctgcaggagcacgtggtgaaggaggagctgctgaacgcgctctactgcgaattcatc
aaccgtgtgaacgaggtgggggtggatgtgaacagggccattgctcacccccacagccag
gctttgctgcagtacgtgtgtggcctgggaccacgcaaaggcactcacctgctgaagatc
ttaaaacaaaacaacacccgtctggagaacaggacccagctggttacgatgtgtcacatg
ggacccaaagtgttcatcaactgtgctggcttcatcaaaattgacacagcatcactgggt
gatagcactgattcctacattgaagtcctagatggctctagggtccatcctgaaacctat
gaatgggcaaggaaaatggcagtggatgccctggaatatgatgagtcagctgaggatgca
aatcctgcaggagctctggaggagatcctggaaaaccccgagcgcctgaaagacctggat
cttgatgcctttgctgaagaactggaaagacagggctacggtgacaagcacatcactttg
tatgacattcgagctgagctaagctgcagatacaaggacctgagaaccccgtaccgttct
cccaacacagaggaggtcttcaatatgctgaccaaagaaactccagagacattttacata
ggtaaaatgatcatctgcaacgtgactgggattgcccacaggcgcccacagggagagagc
tacgaccaggcgatacggaacgacgaaactggcctttggcagtgccctttctgccagcag
gacaacttcccagagctcagtgaggtttggaaccattttgacagcggttcctgcccgggt
caggccattggcgtgaagacacgtctggataatggtgttgctggcttcatcccaacaaaa
tttcttagtgacaaggtggtcaagaggccagaagaaagggtgaaggtgggaatgaccgtc
cactgccggatcatgaagattgacattgagaaattcagtgcagacctgacctgcaggacc
tcagacctgatggacaagaacaatgagtggaaactgcccaaagacacctactacgacttc
gactctgaagcagcagatcacaaacaggaagaagacatgaaaagaaagcagcagaggaca
acgtacatcaagagggtgattgctcacccatcattccacaacatcagcttcaaacaagca
gagaagatgatggagaccatggaccaaggggatgtgattattcggcccagcagcaaaggg
gagaaccatctgactgtcacctggaaggtcaatgatggcatttaccagcacgtggatgtc
cgagaagagggcaaggagaatgccttcagcctgggctccatgctctggattaacacagag
gagtttgaagacctggatgaaattgttgctcgttatgtccagccaatggcttcttttgcc
agagatctgttgaaccacaaatactaccaggactgcaatggtggagacaagaagaagctg
gaagagctgctgataaagaccaagaaagagaagccaacatttattccatactttatcagt
gcctgtaaagatctacctggtaaattcctcttgggatatcagcctcgaggcaaaccaagg
atagagtatgtgacagtaacaccagagggattccgctaccggggccaagtcttccctact
gtgaatggacttttccgatggtttaaggatcattatcaggaccctgttccaggtattacc
cccagcagtagcagtcggaccaggactccagcctccattaatgctactccagctaacatc
aacctggcagacctgacgcgtgcagtgaacgctctgccacagaacatgacctcccagatg
ttcagtgccatcgctgctgtgacaggccagggacagaacccaaatgccaccccggcacag
tggggctccagccagtacggctacggaggcagcggaggcggcagcagcgcctaccacgtc
ttcacgactccagcacagcagccggtggccacccctctgatgacccccagctactcctac
actactcccagccagcccatcaccacgccccagtaccagctccaggccaacaccacaccc
cagtccacccagtctcaggcacagtcgcagccatcgtccagctccaggcagaggcagcag
ccaaagaccaacagccacgctgccatcgactggggcaagatggccgagcagtggctgcag
gagaaggaggctgagcggaggaaacagaagcagaggttgacccctcgcccgtctcccagc
cccatgatcgagagcacgcccatgtccatcgccggggacgccacgcctctcctggatgag
atggatcgatag
DBGET
integrated database retrieval system
