Corvus cornix (hooded crow): 104691268
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Entry
104691268 CDS
T03546
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104691268 (ZC3H12B)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
104691268 (ZC3H12B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
104691268
NCBI-ProteinID:
XP_039428022
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All DBs
Position
4A:1150653..1175518
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AA seq
834 aa
AA seq
DB search
MTAWSMVGKLKMEKRHSREDRNVEQDAGECSAESEEWTSSESEPEQPYFRSSTQWREKEV
STKPHRPLCRSPCLDRPSFSQSSITQDLKLDECKTNLDKEYQAKMDFALKLGYAGDQIQA
VLNKLGADALINDVLAELVRLGNKSESEGQSTASSTSSTLVPRGPCPKEIASPELSLEDE
VVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRKEQS
RPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYR
DLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQPCP
YGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGPSSSKGE
ISSEVKRIAPKRQSDPSIRSVAVEPEEKLSAARKSEASSVPSLVSALSVPTLPPPKSHAA
GALNTRSASSPVPGSSQFVHQKSSLEHMSSVQYPPILVTNSHGTSVSYIDQYPKYESLGD
HGYYSLLSDFSNLSISSIRNSDYYGADMDQGMYSRNSSPCPDNCLSHTSNDSYSSYNDLY
LGVADASPEDNVKSHRLPSKNRLQPFPHGYHEALNRGQSYGTEEPKQSLRKQSVSHLGLH
AQHPVVGARSSCPGEYPVPQNVHPSTAQPSRALVMTRMDSISDSRLYESNPTRQRRPPLC
REQHASWDPLPCASDSYTYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNPWIGICGEP
REPHIIPEHQYQTYKNLCNIFPPSIVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtctatggtagggaagctgaaaatggagaagaggcactccagagaagac
agaaatgtggaacaagacgcgggggaatgcagtgctgaatctgaggaatggacgagctca
gaaagtgagcctgagcaaccatacttcagaagcagtactcagtggagagaaaaggaggtt
tccaccaaaccacatcggccactctgccgatccccgtgtttggatcgcccaagtttttca
cagagcagtatcacacaagacttgaagctagatgaatgcaaaacaaatttggacaaggaa
taccaagctaaaatggattttgctttaaagcttgggtatgcaggagatcagatccaggct
gtactgaataagttgggagcagatgcgctcatcaatgatgttctagcagagcttgtgaga
cttggcaacaaaagtgaatcagagggacaaagcactgccagcagtaccagtagtactctg
gtgccaagaggcccttgcccaaaggaaatagcaagccctgaattgtccctggaagatgaa
gttgtggataacagtgataacctgaggccaattgtcattgacggaagcaatgttgctatg
agccatgggaacaaagaaggattttcctgccggggaattcaactagctgttgattggttt
ctggaaaaaggacataaagatatcactgtgtttgtacctgcatggagaaaagaacagtct
cgacctgatgcaccaattacagatcaagaaatcttacgtaaattggagaaagaaaaaatt
cttgttttcaccccatctcgaagagttcagggaagaagagtagtttgctatgatgatcga
ttcatagtaaaacttgctttcgactcagacggcatcattgtgtcaaatgataactatcgg
gatcttcaaaatgaaaaaccagaatggaagaagttcatagaggagcggctactaatgtat
tcttttgtgaatgacaaatttatgcctccagatgatcctttaggacgccatggtccaagc
cttgaaaatttcttaagaaaaaggccagttattcctgaacataagaaacaaccgtgtcct
tatggtaaaaagtgcacatatgggcacaaatgtaaatattaccacccagaacgtgcaaac
cagcctcaaaggtcagtagcggatgagcttcgaataagtgccaaattatctgctgtgaaa
actatgagtgagggagccttggccaaatgtggcacagggccatccagctccaaaggagaa
atcagttctgaagtgaaacgcattgccccaaaacgtcagtcagatccaagcattaggtca
gtagctgtggagcctgaggaaaagttatcagcagcccggaagtccgaggccagctctgtc
ccgtctctggtttctgcattaagtgtaccaacgctccctccaccaaaaagccatgcagct
ggtgcattaaatactcgttctgcaagcagtccggtgccaggttcctcacagttcgtacat
cagaaatcctcactggaacatatgtccagtgtgcaatatcctcctatactagtcaccaat
agccatggcacctcagttagctatattgaccagtatcccaaatatgaatcactgggggac
catggctattactccttactcagtgatttctccaacttaagcataagtagtatccgtaac
tcagattattacggggctgatatggaccaggggatgtattctagaaactcaagcccctgt
cctgacaattgcttaagccatacaagtaatgattcttattcctcttacaatgacttgtat
ctgggtgtagcagatgccagtccagaagacaatgtgaagagccacagactgccatcgaaa
aatcgtcttcagcctttccctcatggttaccatgaagccttaaatagaggtcagagttac
ggaactgaagagcctaagcaatcccttcgcaaacagtcagtttcccacttaggcctacat
gcccagcatccagttgttggagcacggtccagttgtccaggagaataccctgtgcctcaa
aatgttcatccatcaactgcacaaccaagccgtgccttggtgatgacaagaatggacagt
atttctgactcacggctttatgaaagtaacccgacaaggcagaggcgaccacctctctgt
cgagagcagcatgccagctgggatccattaccatgtgcatcagactcttacacttaccac
tcatatccactgagtaacaacctcatgcagccatgttatgaacctgtaatggtaagaagc
atgcctgagaagatggagcaactctggagaaatccctggattgggatatgtggtgagcca
cgggaacctcatatcatcccagaacatcagtatcaaacatacaagaacctctgcaatatt
ttccctccaagcattgttctttctgtgatggaaaagaatccccatatgacagatgcacaa
cagctggcagctatgattgttgccaaattaagaacagggcgttag
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