Corvus cornix (hooded crow): 104691324
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Entry
104691324 CDS
T03546
Symbol
RBMX
Name
(RefSeq) RNA-binding motif protein, X chromosome isoform X1
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104691324 (RBMX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccw03041
]
104691324 (RBMX)
Spliceosome [BR:
ccw03041
]
Common components
Common spliceosomal components
hnRNP proteins
104691324 (RBMX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_7
RRM_5
RRM_occluded
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
104691324
NCBI-ProteinID:
XP_039427753
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All DBs
Position
4A:complement(3425330..3435895)
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AA seq
385 aa
AA seq
DB search
MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA
DAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGAR
GPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGG
PPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSR
DEYPSRGYSLSSYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYG
GSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSS
SSRGAPRGGGRGGSRSDRGGGRSRY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagcagatcgtcctgggaagctgttcattgggggcttgaacacagagactaat
gagaaagcccttgaggctgtatttggcaaatatggacgcattgtggaagtccttttgatg
aaagatcgggaaacgaacaagtccaggggatttgcattcgtcacatttgagagtccagca
gatgcaaaagatgctgccagagatatgaatggaaagtcattagatgggaaggcaattaaa
gtggaacaagcaaccaagccatcctttgaaagtggtggtaggcgtgggccgccaccccct
ccccgaagcagaggtcctcccaggggccttagaggtgcaagaggcggaagtggcgcaaga
ggaccaccttcaagagggagtcacttggggtcttctcgagggccacttcctatgaagaga
ggtccacctccacgaagtggaggccctccacctaaaagatcggcaccttcaggaccagtg
cgtagcagtagtatgggaggaagagctcctgtatcacgtggaagagatggttacggtggt
cctccacgcagagaaccaatgccgtcacggagagatgtctacatgtctccaagagacgat
ggctatagcactaaagatggttactcaagcagagattatcccagttccagggatacccgg
gactatgcaccacctccccgagactacgcatatcgtgattatggtcattccagttcacgt
gatgagtacccctccaggggatatagtctttcctcctatagtgatcgtgatggatatggt
ggtggacgtgacagagactactccgatcatccaagtggaggctcctacagagattcatat
gagagttatggtaactcacgtagtgctccacctgctcgagggcccccgccatcatatggt
ggaagcagtcgctatgatgattacggcagcacacgagatggatatggaagccgagaaagt
tactcaagcagcagaagtgatgtctactcaagtggccgtgatcgtgttggaagacaagac
aggggtcttcccccatccatggaaaggggctatccacctcctcgggattcttacagtagt
tcaagccgtggggcacccagaggtggtggccgtggtggaagcagatccgatagaggtgga
ggcagaagcagatactaa
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