Corvus cornix (hooded crow): 104691416
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Entry
104691416 CDS
T03546
Symbol
ATXN1
Name
(RefSeq) LOW QUALITY PROTEIN: ataxin-1
KO
K23616
ataxin 1/1L
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104691416 (ATXN1)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
104691416
NCBI-ProteinID:
XP_010401187
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Position
2:complement(63980127..64141607)
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AA seq
803 aa
AA seq
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MKSNQERSNECLPPKKREIPATSLPSEVKPVLPNENHRADNLAWLPSTPSGQGGLGGRHR
PGATSSVDGGLQQGLHKSLSAGLDYSPPSAPRSVPASTTLPTVYSPALSQSGTPVSPVQY
THLQHTFQFVGPQYSGSYTGFIPSQLISPTANSATSAVAAATAVASTPSQRSQLEAYSTL
LASMSGLSQQGHKVEPHLVRTPGLIAAGSPPPAQQNQYVHISSSSQSTVRNVSPPTIPVP
LHPHQTVIPHTLTLGPSSQVVVQYTDSGGHFVTRDPPKKPESSRLQAMQAKEVLNGEIEK
SRRYGISPSADMGLVKAGNKPAPHHYETRHVVVHSSPAEYGVRDSSGVRASVMVVPNSST
PTADMEVQQATNRETSPSALNDKGSLHLGKPTHRSYALSPQQALGHEGVKAVATLSPHTV
IQTTHSASEQLPVGLPATAFYTGTQPPVIGYLSGQQQAIGYPSSLSQHLVIPGTQSLLIP
VGSADVEPSGVTPAIVTSSPQFAAVPHTFVTTAXPKSENFSAEPLTTQPAYQATMVQAQI
HLPVVQSIASPAAAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDS
STVERIEDSHSPGIAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLP
CSKLSVGDVCISLTLKNLKNGSIKKGQPMDSASILLKHSKNDSLAGSRHRYAEQENGINQ
GSAQMLAENGELKFPDKIGLPAAPLLTKTEPSKPPATRKRRWSAPETRKLEKSEEEPPLT
LPKPSFIPQEVKICIEGRSNLGK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagagcggagcaatgaatgcctgccacctaagaagcgagaaatccct
gccaccagcctgccttcagaggtgaagccagtcctgccaaacgaaaaccaccgtgcagat
aacctggcatggctccccagcacacccagtggccagggtggcctggggggccggcaccgg
cccggggccacctcctcggtggatggaggcttgcagcagggtttgcacaagtcactatct
gcagggctggactattccccgccaagtgcgcccaggtctgttccagcctctaccactctt
cccacggtgtactcgcctgccctctcccagtcagggacccccgtttcccccgtgcagtac
actcacctgcagcacaccttccagttcgttgggccgcagtacagtggatcgtacaccgga
ttcatcccctcacagctgatttccccaacagccaattctgcgaccagtgccgtggcggcg
gccacagccgttgcgagcactccatcccagcgctcccagctggaggcttattccactttg
ctggccagcatgagcggcttaagccagcaggggcacaaagttgagccgcacctggtcagg
acgcctggactgattgctgctgggtctcctccacctgcccagcagaaccagtacgtccac
atttccagctcttcccagagcactgtcagaaatgtctctcctccaaccatcccggtcccc
ctgcacccgcatcagacagtgatcccacacaccctcaccctcggcccttcctcccaagtg
gtggtgcagtacactgactcggggggccactttgtcaccagggatccccccaagaaaccc
gagagcagccggctgcaggcgatgcaggccaaggaggtactgaatggcgagatagagaag
agccggaggtacggcatttcgccttcagccgacatgggtctagtcaaagcaggcaataaa
ccagccccccatcattacgagaccaggcacgtagtggtccactcgagccctgccgagtac
ggcgtgcgggattcctcaggtgtccgagcctccgtcatggtggtccccaacagcagcacg
cccacggcagacatggaggtgcagcaggccaccaaccgtgagacctctccttcagccctc
aatgacaagggaagtttgcacttaggaaagccaacccaccggtcctatgccttgtctccg
cagcaggctctgggccacgagggggtgaaggcagtggccacgctgtcccctcacactgtc
attcagaccacccacagcgcctctgagcaactgcctgtggggctgccggcgacggctttc
tacactgggacccagccgccggtgattggctacctgagcggccagcagcaagccatcggg
taccccagcagcctgtcgcagcacctggtgatcccgggcacccagtccctgctgataccg
gtcggcagtgcggacgtcgagccgtcaggagtcacgcctgcgatcgtcacgtcgtcgcct
cagtttgcagcagtgcctcacacgtttgtcaccaccgccngtcccaagagcgagaacttc
agcgcggagcccctcaccacccaacctgcctaccaggccaccatggtgcaggcgcagatc
cacctgcctgtggtgcagtccattgcctcccctgccgctgcgccccccacgctgccccct
tacttcatgaaggggtcgatcatccagctggccaacggggagctgaagaaagtagaggac
ttgaaaacagaagacttcatacagagcgcggaaattagcaacgacctgaaaatagactcc
agcactgtggagaggattgaagacagccatagcccaggcattgccgtcatacagtttgcg
gtgggggagcatcgagcacaggtcagcgtggaagtcttggtagaataccctttttttgta
tttggacaaggctggtcatcctgctgccctgagagaaccagccagctctttgatttgcca
tgctccaaactctcggtgggggacgtctgcatatcgctcacgctcaagaacctgaagaat
ggctctattaaaaagggccagcccatggactcagctagtatcttgctgaagcattcaaag
aatgacagtctagctggaagtagacacaggtatgcggagcaggaaaacgggattaatcag
ggaagtgcacagatgttagctgagaacggtgaactgaagtttccggacaaaataggattg
cctgcagcacctttgctcaccaaaacagaacccagcaagcccccagcaacgaggaagagg
aggtggtcagcccctgaaacgcgaaaactagagaaatcagaagaggagccacctttgact
cttcccaagccttcttttattcctcaggaggttaagatttgcattgaaggtcgatccaac
ctaggaaagtaa
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