Corvus cornix (hooded crow): 104691464
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Entry
104691464 CDS
T03546
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104691464 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104691464 (NHLRC1)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104691464 (NHLRC1)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104691464 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
104691464
NCBI-ProteinID:
XP_010401248
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All DBs
Position
2:62738022..62745407
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AA seq
564 aa
AA seq
DB search
MSSEELAVSGQGKAAAAKRKLPSSKKGWREVDWMTVKGRVWVENVLAVAHKCAAPSSESA
PIVRGSDTPKCCAAMLQDLDRHRSQAERKLVKFNEVFWWRYEHWWICECCGGYRDAPRSQ
REGRPGPQGPSAVPAAALLRPRWPAGGARPPQPRSAPAPLGPGDRGRRGGSGLSPQAGMA
AEDEAELSLLECRVCFEPYGPDGQRRPLNLPCGHVLCRGCVGALAGAERRRLECPFCRRL
CGPAETSDCRPLLQLLELLGPGGGGLASALGRSGGGAAAPAPAGLGLRLCLGGWGSLVNP
TGVAACPGSGRLAVAHDGKKRIHVFGPSGFCLRRFGERGDAGNDIKYPLDVTVTSDGHVV
VTDGGDCSVKAFDFEGRGVLAVREGFSLPWGLDATPKSEVILTDSEAGALYRLTADFQRG
ELKKCQMIRSRLVSPRAVAVCQTSGAVVVIEHLKARGPSKDSTRVKIFSAEMDLIGQMDS
FGLNLVFPSRIYATAVAFDKEGRVLVTDVCSLAVICLGKPEEFPIFNPLISHGLSYPVGL
TYMANDSLVVLDSGDHSVKVYSST
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgaagagctggcagtgagtgggcaaggcaaggcagcagctgccaagaggaaa
ttaccatccagcaagaaaggctggagggaagtagactggatgacagtaaaggggagagta
tgggtagaaaacgtcctggcagttgctcacaagtgtgctgctccctcatctgagagtgca
cctattgtcagggggagtgacacaccaaagtgctgtgctgccatgctgcaagacctggac
aggcacaggagccaggcagagaggaagctagtgaagttcaatgaagtgttctggtggcga
tatgaacactggtggatctgcgagtgctgtggcgggtacagggacgctccgcggtcccag
cgggaagggcggcccgggccgcagggccccagcgccgtcccggcggcagcgctgctccgc
ccccgctggcccgcagggggcgcgcggccgcctcagccgcgctcagcgcccgccccgctg
ggcccgggggatcggggccggcgcgggggctccggtctctctcctcaggcgggcatggcg
gcggaggacgaggcggagctgagcctgctggagtgccgggtgtgcttcgagccgtacggc
cccgacgggcagcggcggccgctcaacctgccctgcgggcacgtcctctgccggggctgc
gtgggggccctggccggcgccgagcgccggaggctggagtgtcccttctgccggcggctc
tgcggccccgccgagaccagcgactgccggcctctgctgcagctgctggagcttctgggc
cccggcggcggcggcctcgcctcggccctgggcaggagcggcggaggggcggcggcgccg
gctcccgcggggctcggtctgcggctgtgcctggggggctgggggtcgctggtgaacccc
actggggtggcggcctgccccgggtcgggccgcctggcagtggcacacgacggcaagaaa
aggatccacgtcttcgggccgagcgggttctgcctgcggcgtttcggggagcggggggac
gcgggcaacgacatcaagtatcccctcgatgtgacggtcacgtcggacggacacgtggtg
gtcacggacggcggggactgctccgtgaaggccttcgattttgagggaaggggagtcctg
gctgtccgggaaggcttctctttgccctggggcttagatgccacccccaagagcgaagta
atcctgaccgactcggaggcaggcgcgctctaccgcttgacggccgacttccaaaggggg
gaattaaagaagtgtcagatgatccggtcccggctagtcagccccagagcggttgcagtc
tgccagacctcgggtgctgtcgtggtaatagagcacctaaaagctcgagggccgagcaag
gacagcacccgcgtgaagatattcagtgccgagatggatctcatcggccagatggacagc
ttcggtctgaacctcgttttcccctccagaatatatgctactgctgtggccttcgacaaa
gaaggtcgtgttctagtaacggatgtctgtagcctggctgtcatatgcttagggaaacct
gaggaatttcccatctttaatcctctaattagccatggactttcttatcctgtcggactg
acttacatggcaaatgattcccttgttgttttagacagcggtgatcattcagtaaaagta
tatagctctacctga
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