Corvus cornix (hooded crow): 104691496 Help Entry 104691496         CDS       T03546                                  Symbol CCDC88A Name (RefSeq) girdin isoform X16   KO K25392   girdin Organism ccw  Corvus cornix (hooded crow) Brite KEGG Orthology (KO) [BR:ccw00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:ccw03037]     104691496 (CCDC88A) Cilium and associated proteins [BR:ccw03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    104691496 (CCDC88A) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HOOK_N APG6_N HOOK GAS KASH_CCD Motif Other DBs NCBI-GeneID:  104691496 NCBI-ProteinID:  XP_010401297 LinkDB All DBs Position 3:complement(2022684..2087976) Genome browser AA seq 1884 aa AA seqDB search MENEIFTPLLEQFMSSPLVTWVKTFGPLAGGNGTNLEEYVALVDGVHLNEVMLQINPKSA NQRINKKVNNDASLRIQNLSILVKQIKTYYQETLQQLIMMSLPNVLIIGKNPFSEPGTEE VKKLLLLLLGCAVQCQKKEEFIERIQSLDFDTRAAVAAHIQEVTHNQENVFDLQWMDVIV LTQEYVEPLLKNMALHLKRLIDERDEHSETIIELSEERDCLRFLPHASAAQSPCGSPGMK RTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEAELKRLQQENMNLLSD ARSARVYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETKT MLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQ SMDESLHLGWELEQINRTTELSEVPQKSLGHEVNELTSSRLLKLEMENQSLLKTVEELQS AVGSVEGSSSRILKMEKENQRLSKKLEELENEISQEKQSLQNSQNQSKDLMKEKAQLEKT LEALRENSERQIKLLEQENEHLNQTVASLRQRSQISAEARMKEIEKENKILHESIKETSS KLNKIEFEKKQIRKELEHYKEKGERAEELENELHRLEKENELLQKKITNLNITCEKIEAL EQENSDLETENRKLKKTLDSLKNLTFQLESLEKENSQLDEENLELRRTIESLKCTSIKVA QLQLENKELESEKEQLKKSLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQQ LESELQDLESENQTLQKNLEELKISSKRLEQLEKENKLLEQETSQLEKDKKQLEKENKRL RQQAEIKDSTLEENNVKISNLERENKSLFKEIVVYKESCLRLKELEKENKELVKRATIDK KTLVTLREDLVNEKLKTQQMNNDLEKLAHELEKIGLNKERLLHDEQSSDDRYKLLESKLE STLKKSLEIKEEKIAALEARLEESTNLNQQLRQELKTVKKNYEALKQRQEEERMVQNSPP RSGEENQSVNKWEKENQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNN LQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSALENE NECVLKEREDLKGLYEALLKDHERLEQLHERQAAEYESLIAKHGSLKSAHKNLEVEHKDL EDRYNQLLKQKVQLEELEKVLKTEQDKMLQQSEKHETVAAEYKKLRDENERLTHTYSQLL RENEVLQTDHKNLKTLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKG NLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIM DQYKFYEPSPPRRRGNWITLKMRKLIKSKKDGNRERLKSVTLTPTRSESSEGFLQLPHQD SQDSSSVGSNSLEDGQTLGTKKSSMGALKRLPFLRNRPKEKDKMKAFYRRSMSMNDLVQS MVLAGGQWTGSSEHLEGPDDISTGKRRKELGAMAFSTTAINFATVNSSTGFRSKQLLNNK DTTSFEDVSPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVNSQSR PQSHSSGEFSLLHEHEAWSSSSSSPIQYLRGHTRSSPVLQHRMPETPESRGKQTKMGSPG SEVVTLQQFLEESNKSNSSEMKSASEENLLDEVMRSLSESAELAGREKLRKQPAAGCGIV RSLSVRNTVDFSDGRSLKPEQLVRPSLRKTEDLYFSSSPIKFTPGAQGKARSVKEKIQAT VTQRQSRDCNPYATLPRASSVISTAEGTTRRTSIHDFLSKDSRPPVSVDAAPAPADGSAP PTSNVEAIPESRNSKSRSREQQSS NT seq 5655 nt NT seq  +upstreamnt  +downstreamnt atggagaacgagatcttcacaccccttctggagcagttcatgtcgagccctcttgtcacc tgggtgaagacattcggaccgctagctggaggaaatgggaccaacctggaggaatatgtg gcactggtggatggagtgcatctgaacgaagtcatgctgcaaatcaatccaaagtctgct aatcagaggataaacaaaaaagtaaacaatgatgcatcattaaggattcaaaatttgtct attttggtgaaacaaataaaaacttactatcaggagactttgcagcagctgatcatgatg tctttgccaaatgtgctaataattggcaagaatcctttttctgaaccaggtactgaagaa gtaaaaaagctcctcctgcttttgcttggttgtgcagttcagtgtcagaaaaaagaagaa tttattgaaagaatccaaagtctggattttgataccagagcagctgttgcagcccatatt caggaggtaactcataatcaggaaaatgtgtttgacctgcagtggatggatgtcattgtg ctgacacaagagtatgttgaacctctcctgaaaaatatggcattgcatttaaaaagactt atagatgaaagagatgagcactcagagaccatcattgagctgtcagaggagcgggactgt ctccgtttcctgcctcacgcgtcggcggcgcagtccccgtgcggctcccccggcatgaag cgcacggagagccggcagcacctgagcgtggagctcgctgacgccaaggccaagatcagg aggcttaggcaggagcttgaggaaaagactgagcagctgcttgactgtaaacaagaactg gaacagatggaagctgaactgaagagacttcagcaagagaacatgaacctgctgtcggat gcccgctctgccagggtgtacagggatgagctggacgcgctccgggagaaggcgatccga gtggacaagctggagagtgaagtcagccgctacaaggagaggctccatgacattgagttc tacaaagccagggtggaggagttaaaggaggacaatcaagtgttgctagaaaccaagaca atgttggaagatcaattagaggggacacgagcccgttcggataaactgcacgagttagaa aaagagaatttacagctaaaagctaaattgcatgatatggagatggagcgtgatatggac agaaagaagattgaggagctcatggaggaaaatatgaccctagaaatggctcagaaacaa agtatggatgagtctttgcatcttggctgggagcttgagcagataaataggactactgaa ctttctgaagtgccccagaaatcactaggccatgaggtgaatgagctgacatccagcagg ttactgaagctggaaatggaaaaccaaagtttgctgaagactgtggaagaactgcaaagt gcagtgggctctgtggaaggcagcagttcaaggattctgaaaatggaaaaagaaaaccaa agacttagcaagaagcttgaagagctggagaatgaaattagccaagagaaacaaagtctt cagaacagtcaaaatcagagtaaagatttgatgaaagaaaaagcacagcttgaaaagaca cttgaagcacttcgagagaactccgagagacaaattaaactcttggaacaagaaaatgaa cacttgaatcaaactgtggcttctctaaggcagcgctcccaaatcagtgctgaggcaaga atgaaagaaattgaaaaggaaaataaaatccttcatgagtctatcaaagagaccagcagt aagttaaataagattgaatttgaaaaaaaacaaatcaggaaagaactggaacactacaaa gagaaaggggagagggcagaagaattagagaacgagctgcatcgtctggagaaggaaaat gagttattacagaaaaaaatcaccaacctaaatatcacttgtgagaagatcgaggcctta gaacaagagaactctgacctggagacggagaacagaaagctgaaaaaaaccttggatagc ctgaaaaacctcacttttcagttagaatccttagaaaaggagaattcccaactcgatgaa gaaaatttagagttacgaaggacaattgaatccttgaagtgtacaagcattaaagtggca cagttacaattagaaaataaggagctggagagtgaaaaggagcaactcaaaaaaagcctt gaactgatgaaagcctcttttaagaagactgaacgcttggaagtcagttaccaaggcctg gacacagaaaaccaaaggctacagaaagccctggaaaacagcaataagaagattcagcaa ttagagagcgaattacaggatttagagtctgaaaatcagaccctgcaaaagaacttggaa gagttaaaaatctctagtaagcgcctggagcagttggaaaaggagaataagttgttagaa caagagacttctcaactggaaaaggataagaaacagctggaaaaggaaaacaaaaggctt cgacagcaagcagaaattaaagatagtaccttagaagaaaataatgtaaaaatcagtaat ctggagagggaaaataaatctctgtttaaagaaattgttgtatacaaagagtcgtgtctg cgcctgaaagaactggaaaaggaaaacaaggagctggtgaaaagagcaaccattgataag aaaaccctggtcactttgagagaggacttagtgaatgagaagttgaagacacaacagatg aacaatgatctagaaaaactggcccacgagcttgaaaaaattggcttgaacaaggagcgt ctcctgcacgatgagcagagcagtgatgacaggtacaagcttttggagtccaaattagag tccacgctcaagaagtctctggaaataaaagaagaaaaaattgctgctttggaggctcgt ctggaagaatcaacaaatctaaaccagcagctgcgtcaggaactgaaaacagtgaagaag aactatgaagctctcaagcaaagacaagaagaggaaaggatggttcagaattctcctcca agaagcggagaagaaaatcagtctgtcaataagtgggagaaggaaaatcaggagactact agagaattattgaaagttaaagatagattaatcgaggtggaaaggaataacgcaacgctg caggcagagaagcaggcgctgaaaacgcagctcaagcagctcgagacacagaacaacaat ctgcaggcccagatcctggccctgcagagacagactgtgtccctgcaggagcaaaacaca actctgcaaactcagaatgccaagctgcaggttgagaattccacgctgaattcccagagc acctcgctgatgaaccagaacgcgcagctgctgatccagcagtcggccctggagaatgag aacgagtgcgtgctgaaggagcgcgaggacctcaaggggctctacgaggccctgctcaag gaccacgagcgcctggagcagctgcacgagcgccaggcagccgagtacgagtccctcatc gccaagcacggcagcctcaagtctgctcacaaaaacctggaggtggagcacaaggacttg gaggataggtacaatcaactgctgaaacagaaggtgcagctggaagaactggagaaagtt ctcaagacagagcaggacaaaatgctgcagcaaagtgagaaacatgaaactgtggcagca gaatataaaaagcttcgggatgaaaatgaaaggctcactcacacgtacagtcagctcctg agggaaaatgaagtactccagactgaccacaagaatctgaaaacattattgaacaattcc aaactggaacaaacacggttggaagccgagttttccaaactcaaagaacagtaccagcaa ctggatattacatcaacaaaactaaataatcagtgtgagctgctcagccagcttaaagga aacctggaggaggagaacagacacctgctggatcaaatccaaactttaatgctgcagaac agaacactactggagcaaaacatggaaagcaaggatctcttccatgtggagcaaaggcaa tacattgacaaactaaatgaattgaggcgccagaaggagaaactggaggagaagataatg gatcagtataaattttatgagccatctccaccacgaagaaggggcaactggatcaccctg aagatgaggaagctgatcaagtccaagaaggacgggaaccgcgagcgcctcaagtcagtg acgctgacgcccacgcgctccgagtccagcgagggcttcctgcagctgccccaccaggac agccaggacagctcctccgtgggctccaactccctggaggacgggcagaccctgggcacc aaaaagagtagtatgggtgcactgaaaagactgccctttttgaggaacagaccgaaggaa aaagacaaaatgaaggccttctaccgtcgctccatgtccatgaatgacctggtgcagtcc atggtcctggcaggaggacaatggacaggtagttctgagcatctggagggtcctgatgat atatccacgggtaaaaggaggaaggaattgggagctatggccttctctactacagctatc aactttgccactgtcaactcctccacaggcttcagatccaagcagttgctaaataataaa gatactacatcctttgaagatgtaagtccacaaggtattagtgatgattctagtacagga tcgagagttcatgcttccagaccagccagccttgatagtggcaggacatccactagcaat agcaataacaatgcttcactccatgaagtcaaagcaggtgcagtgaacagccagagcagg ccccagagccacagcagtggggagttcagcctgctccacgagcacgaggcctggtccagc agcagcagcagccccatccagtacctgagggggcacaccaggtctagccctgtgctccag cacaggatgcccgagacgccggagagtcgtgggaaacagaccaaaatgggctcccctgga agtgaagttgtcaccctgcagcagttcctggaagaaagcaacaagagtaactccagtgag atgaaatctgcaagtgaagagaaccttttagatgaagtgatgagaagcttgtccgagtct gcggagctggcagggagggagaagctccgaaagcagccagcagctggctgtgggatcgtg agatccctgagtgtcagaaacacagttgatttctcagatggacgatcccttaaaccagaa cagctggtaaggcccagcctccggaagactgaagatctctacttcagtagctctccaatc aagttcacccccggcgcccaggggaaggccaggtccgtgaaagaaaagatccaagcaact gtgacccagcgacaatccagggactgcaatccctacgccaccttacctcgtgccagcagc gtgatttccacggcagaagggaccacccgaaggacaagcatccatgattttttgtctaag gacagtaggccgcccgtgtctgtggatgcagccccggcccccgctgacgggagtgctccg cccacctccaatgtggaagctatcccagaaagcagaaattcaaaaagcaggtctagggag caacaaagctcctaa

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