Corvus cornix (hooded crow): 104691557
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Entry
104691557 CDS
T03546
Symbol
PAPOLG
Name
(RefSeq) poly(A) polymerase gamma isoform X5
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104691557 (PAPOLG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104691557 (PAPOLG)
Enzymes [BR:
ccw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
104691557 (PAPOLG)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
104691557 (PAPOLG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_central
PAP_NTPase
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Nrap_D2
Polbeta
Motif
Other DBs
NCBI-GeneID:
104691557
NCBI-ProteinID:
XP_019143520
LinkDB
All DBs
Position
3:3784756..3803790
Genome browser
AA seq
721 aa
AA seq
DB search
MKPFGVFEDQEELFHRTTVLGKLNNFVREWISELAESKNLPPSITEQVGGKIFTFGSYRL
GVHTKGSDIDALCVAPSHVERSDFFQSFFEKLKNLEEVKNLRAIEDAYVPVIKFEFDGIE
IDLVFAKLSLPTVSDDLDLRDDSCLKSLDIRCIRSLNGSRVTDEILRLVPNLENFRLTLR
AVKLWAKRRGVYSNIMGFLGGVSWAMLVARICQLYPNALASTLVNKFFLIFSKWDWPKPV
LLKRLEESFLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTYNVSVSTRAVMVEEFQRGL
EVTDEILKGKSDWSKLFEPLNFFQKYKHYIVLTASAFTEEHHLNWIGLVESKIRVLVGNL
ERNEFITIAHVQPQSFPGNKDLYKQSGYVSMWFLGLVFKKAESAVKTNVDLTHGIQSFTD
TVYRQASALNILKEGMKIEATYVKRKQLHYFLPAGTLQKRKKQRVSDISQNNSGLQCKRS
SLGESCSDGSKDRDSRTPSNSSSLNKISKLDISTAETERNVACQSCSGANSVAEPSTSKG
LCIPVTDPKMEATVALRASGPPIGCTIPGYNTVCQLRTCFVQGQHKLSGTLITDPKNASP
KQHYSPTFKVSRPPTSGECPQKAIDGEKLNVWDSDFTESGCPQDGRKRATKNGVLDGKSM
QIPVITSRSQRLSSKELPDSSSPVPTNSIRIIKRSIKLTLNGVLRRMFRVLRRTFRKNLG
Y
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaagccatttggggtgtttgaggatcaggaagaactctttcacaggacaactgttctt
ggtaaacttaataactttgtcagagaatggatttcagaacttgccgagagcaagaatctt
cccccttcaataacagaacaagttggtggcaaaatatttacatttggttcctacaggctt
ggagtacacaccaaaggttctgacatagatgccctttgtgttgctcccagtcatgtggaa
aggtcggatttctttcagtcattctttgaaaaactgaagaatctagaggaagtaaaaaac
ttaagagccattgaggatgcatatgtaccagttatcaaatttgagtttgatggcattgag
attgatctcgtgtttgcaaagctgtctttgccaacagtttccgatgatctcgatctcagg
gatgactcgtgcctcaaaagcctggatataagatgcatacggagcttaaatggcagcagg
gttacagatgaaatactgcgcctggtgcccaatctggagaacttccggctcacgctccgt
gccgttaaactgtgggcaaaacgacgtggtgtttactccaacatcatgggatttcttggt
ggagtctcctgggcaatgctggtagcaagaatatgtcaactctacccgaatgctttggcc
tctactcttgttaacaagttcttcttgattttttcaaaatgggattggcccaagccagta
ttgctgaaacgtcttgaagagagctttcttaacttacctgtctgggatcctagggtgaac
ccatcagaccggtaccacgtgatgcccatcatcaccccggcctatccacagcagaactcc
acgtacaatgtgtctgtgtcaacacgagcagtcatggtagaggagttccaacgtggtctt
gaagttactgatgaaattctcaaaggaaaatcagactggtcaaagctctttgaaccactg
aacttctttcagaagtacaaacattacattgtgctgactgccagtgcctttacagaagag
caccacttaaactggattggcctcgttgagtctaaaatccgtgtgctggttggaaacttg
gaaaggaatgaatttataactattgcacatgtgcagccacagtctttccctggcaacaaa
gatctctataaacagagtggatatgtatcaatgtggtttcttggccttgtatttaagaaa
gcagaaagtgcagtaaagactaatgttgatctaacacatgggatacagtcgttcactgat
acagtttacaggcaggccagtgccctcaacatcctaaaggaaggtatgaagattgaggca
acttacgtgaagagaaagcaactccattattttttgccagcaggaaccttacagaaaaga
aagaagcaaagggtgtcagatattagtcaaaataatagtggacttcagtgcaaaaggtct
tctttaggtgaaagctgttcggatggttccaaagatagagattccagaacaccctctaat
tcctcttcgttaaataagatatctaagttggacatctctacagcagagacagaaagaaat
gttgcatgtcagagttgtagtggtgccaacagtgtagctgagccatcaacgtctaaggga
ctttgcattcctgtgactgatccaaaaatggaggctacagttgcactaagagcatcggga
cctccaattggttgcaccattccaggatataacacggtttgtcaactcagaacgtgtttt
gtgcaaggacagcataaattaagtgggactctaatcacggatcctaagaatgcttcacct
aagcaacattattcaccaacctttaaagtatctcgtccacctacatcgggagaatgcccc
caaaaagccatagatggagaaaagctaaacgtgtgggactccgatttcacagaaagcgga
tgccctcaagatgggaggaagagagccacaaaaaatggtgtccttgatggaaaatccatg
cagattccagtgatcacatcaagatcacagaggctttccagtaaagagctgccagattct
tcatctcctgttccaacgaatagcattcgtattattaaaagatccatcaaacttaccctt
aatggggttttaagaagaatgttcagggttttgagaagaacattcaggaagaatttaggt
tactag
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