Corvus cornix (hooded crow): 104691672
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Entry
104691672 CDS
T03546
Symbol
FMR1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104691672 (FMR1)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104691672 (FMR1)
Factors involved in mRNA localization
Other mRNA localization factors
104691672 (FMR1)
mRNA cycle factors
Stress granule specific factors
104691672 (FMR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
KH_NusA_2nd
KH_2
pAdhesive_11
KIF2A-like_1st
Motif
Other DBs
NCBI-GeneID:
104691672
NCBI-ProteinID:
XP_039427904
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Position
4A:complement(14200372..14232219)
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AA seq
565 aa
AA seq
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MEELVVEVRGSNGAFYKAFVKDVHEDSITVSFENNWQPERQIPFHDVRFPPPAGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLAVPEDLRQMCAKESAHKDFKKAVGAFSVTYDSENHQLIILSINDVTTKR
ANMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFVVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSYLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENDKNIPQEEGMVPFVFVGTKDSITNATVLLDYHLNYLKE
VDQLRLERLQIDEQLRQIGATSRPPPNRTDKDKGYMTDDGPGLGRGSRPYRNRGHSRRGP
GYASGTNSEASNASETESDHRDELSDWSAAPAEEERDNYLRRGDGRRRGGGARGQGGRGR
GGFKGNDEQSRTDNRQRNSREAKGRTADGSLEIRIDCNNERSVHTKTLQNTSSEGSRLRA
GKERNPKKEKTDSADAQQPLVNGVP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaggtgcggggctccaacggggccttctacaaggcatttgta
aaggatgtgcatgaagattcaataacagtttcatttgaaaacaactggcaaccagagaga
caaatcccattccatgatgtgaggttcccaccacctgcaggctataataaagacataaat
gaaagcgatgaagtagaggtttattccagggcaaatgaaaaagaaccctgctgttggtgg
ttggctaaagtgagaatgataaagggtgagttctacgtaatagaatatgcagcctgtgat
gctacatacaacgaaattgtcacaattgagcgtttgagatctgtgaaccccaataaaccc
gcaacaaaagatacttttcataaaatcaaactggcagttcctgaagatttaaggcaaatg
tgtgccaaagaatctgcacataaggacttcaaaaaggcagttggagctttttctgtaaca
tatgattctgaaaaccaccagcttattattttatcaatcaacgatgtaaccacaaagcgg
gcgaacatgctgattgatatgcactttcggagtcttcgcaccaagttatccctgatactg
agaaatgaagaagccagcaaacagctggagagttctaggcaacttgcatcccggttccat
gaacagtttgttgtacgtgaagacctaatgggtttggccattggcactcatggtgctaat
attcaacaagccagaaaagtccctggagtgactgccattgatcttgatgaagatacttgt
acattccatatttatggagaggatcaagatgcggtgaaaaaggcaagaagttaccttgaa
tttgctgaagacgtcattcaggtcccaaggaatttagtaggaaaagtaataggaaaaaat
ggaaaactgattcaggaaatagtggacaaatccggcgttgtaagagtgagaattgaggct
gaaaatgataaaaatattccacaagaagagggcatggtaccatttgtgttcgtaggaacc
aaggatagcatcactaatgcaactgttcttctggattatcatcttaattatttaaaggaa
gtggaccagctgcgtttggaaagattgcaaattgatgagcaactgcgacagattggagcc
acttccaggccccccccaaaccgcacggacaaggacaaagggtacatgaccgacgatggg
ccaggcctcggccgtggcagccggccctacagaaaccgcgggcacagccggcgtgggcca
ggctatgcttcaggaactaattctgaagcatcaaatgcttctgaaacagagtctgatcac
agagacgagctgagcgattggtcggcggccccggcagaggaggagcgggacaattacctg
cgcaggggggacgggcggaggcgcggcggcggcgccagaggccaaggcgggagggggcgc
ggaggattcaaaggcaatgatgaacagtcgcgaacagataaccgtcagcgtaactcaaga
gaggcaaaagggagaacagcagacggatctcttgagatcagaattgactgcaataatgaa
aggagtgtccacactaaaaccttacagaatacctcgagcgaaggcagccggctgcgcgca
ggcaaggagcggaacccgaagaaggagaagacggacagcgccgacgctcaacagccgctg
gtgaacggagtcccctaa
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