Corvus cornix (hooded crow): 104691680
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Entry
104691680 CDS
T03546
Symbol
PDSS2
Name
(RefSeq) all trans-polyprenyl-diphosphate synthase PDSS2 isoform X1
KO
K12505
decaprenyl-diphosphate synthase subunit 2 [EC:
2.5.1.91
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00900
Terpenoid backbone biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
104691680 (PDSS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ccw01006
]
104691680 (PDSS2)
Enzymes [BR:
ccw01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.91 all-trans-decaprenyl-diphosphate synthase
104691680 (PDSS2)
Prenyltransferases [BR:
ccw01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
104691680 (PDSS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
VirK
Motif
Other DBs
NCBI-GeneID:
104691680
NCBI-ProteinID:
XP_039424879
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All DBs
Position
3:70194096..70311256
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AA seq
377 aa
AA seq
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MWGALLRRGVRGTGGLRCLSSGGPPWSQVVSEAEKIVGYPTSFMSLRCLLSDELSNIAMQ
VRKLVGTKHPLLDTARGFVYDSRNNLQMRGLVVLLISKAAGPSTAGLSFQHDMVSGIYSS
QRSLAEITELIHTAFLVHRGIVNIGELKSCDGPLKDMQFGNKMAVLSGDFLLANACASLA
QLQNTKVVELISSAIGDLVQGIYYENSKSSEENCLTDDIGISRWKEQVFLSHSALLAKSC
QAAMELAKHSVEIQDMAFQYGKHMSMSHKLHSDLQPFVKESSTDTMAFSLNSAPAILHQE
FLGREAWLKQIREAQGKGNIVDYKKLQEAIKAGKGVTSAIDLCRCHGNRALAALERFPPS
EARDALANIVYTVTRLP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcgccctgctgcggcgcggggtccgcggcaccggcgggctccggtgcctgtcc
tcgggcggcccgccctggagccaggtggtgtcggaggccgagaagatcgtgggctatccg
acgtccttcatgagcctgcggtgcctgctgagcgacgagctcagcaacatcgccatgcag
gtccgcaagctggtgggcaccaagcacccgctgcttgacaccgcccggggttttgtgtac
gatagccgaaacaatttacagatgcgaggtttggtcgtcctgcttatttccaaagctgct
ggacccagcacagcaggactctctttccagcacgacatggtcagtggaatttattccagt
caaagaagtttggctgagattacggagctgatccatactgccttcctggtgcatcgtggc
atagtaaacattggtgagctcaagtcctgtgatggcccactgaaggatatgcagtttggg
aataaaatggctgttttgagtggagattttcttctagcaaatgcttgcgcaagccttgca
cagttgcagaataccaaggttgtggaactaatttcaagtgctattggtgacttagttcaa
ggtatatattatgaaaattcaaaatcatctgaggagaactgccttacagatgacatcggc
atatctaggtggaaggagcaggttttcctgtcacacagtgctttgctggcaaagagctgc
caggctgcaatggaactagcaaagcacagcgttgagatccaggacatggcattccagtat
ggcaagcatatgtctatgagccataagctacattcagacctgcagccatttgttaaagaa
agttctactgacaccatggccttcagtttgaattctgctcctgcaatccttcatcaggaa
ttccttggaagggaggcatggcttaagcagattagagaggcacaaggaaaaggaaacatc
gtggactataagaagctgcaggaagcaatcaaggctggcaaaggtgtgacatctgccatc
gacctctgccgctgccacggaaacagagcactggcagccctggagcgattccctccctcg
gaggccagggacgccttggccaacattgtctacaccgtgaccaggcttccctga
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