KEGG   Corvus cornix (hooded crow): 104691757
Entry
104691757         CDS       T03546                                 
Symbol
ATG5
Name
(RefSeq) autophagy protein 5 isoform X5
  KO
K08339  autophagy-related protein 5
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw04136  Autophagy - other
ccw04140  Autophagy - animal
ccw04145  Phagocytosis
ccw04216  Ferroptosis
ccw04621  NOD-like receptor signaling pathway
ccw04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    104691757 (ATG5)
   04140 Autophagy - animal
    104691757 (ATG5)
   04136 Autophagy - other
    104691757 (ATG5)
  09143 Cell growth and death
   04216 Ferroptosis
    104691757 (ATG5)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    104691757 (ATG5)
   04622 RIG-I-like receptor signaling pathway
    104691757 (ATG5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccw04131]
    104691757 (ATG5)
   03029 Mitochondrial biogenesis [BR:ccw03029]
    104691757 (ATG5)
Membrane trafficking [BR:ccw04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    104691757 (ATG5)
Mitochondrial biogenesis [BR:ccw03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    104691757 (ATG5)
SSDB
Motif
Pfam: ATG5_UblB ATG5_HBR ATG5_UblA DUF8018 LIC_11090
Other DBs
NCBI-GeneID: 104691757
NCBI-ProteinID: XP_010401700
LinkDB
Position
3:70612985..70691402
AA seq 202 aa
MCTSSRHYPIGLLFDLHASNTALPWSITVHFKNFPEKDLLHCHSKDVIEAHFMACIKEAD
ALKHKSQVINEMQKKDHKQLWMGLQNDKFEQFWAINRKLMEYPPEDNGFRYIPFRIYQAT
TERPFIQKLFRPIASGGQLHTLGDLLKDVCPSAITPEDGEQKTQVMIHGIEPMLETPIQW
LSEHMSYPDNFLHISIIPRPTD
NT seq 609 nt   +upstreamnt  +downstreamnt
atgtgcacctcctctaggcattacccaattggtttactgtttgatctccatgcatcaaat
acagcccttccttggagcatcacagtgcatttcaagaattttccagaaaaggatcttcta
cactgccattctaaggatgtgattgaagctcattttatggcttgtataaaagaagcagat
gctttaaagcacaaaagtcaagtcatcaatgaaatgcaaaaaaaggatcataagcaattg
tggatgggattacagaatgataaatttgagcagttttgggcaataaatcgaaaactcatg
gagtatcctccagaagataatggatttcgatacatcccatttagaatttatcaggcaaca
acagagagaccttttatacagaagctatttcgaccaattgcttcaggaggacagttgcat
actttgggagacctgctaaaagatgtgtgtcctagtgctatcacccctgaagatggagag
cagaagactcaagtgatgattcatggaattgagccaatgctggaaacacccattcagtgg
ctaagcgaacatatgagctatccagataattttctccacattagtatcattccccgaccc
actgattga

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