Corvus cornix (hooded crow): 104691765
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Entry
104691765 CDS
T03546
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104691765 (PRDM1)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104691765 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
zf-C2H2_6
zf-C2HE
zf-met
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
104691765
NCBI-ProteinID:
XP_010401715
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Position
3:complement(70714154..70826742)
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AA seq
822 aa
AA seq
DB search
MRIKGCFLFFQAATQCSSDAVSFKNLVKGREWTMKMDMEDADMTLWTEADFEEKCTYIVN
DHPLDPSADGGTLTQAEASLPRNLTFKYASNCKEVTGVISKEYIPKGTRFGPLVGEIYTS
DTVPKNANRKYFWRIYSSGELHHFIDGFNEDKSNWMRYVNPGYSVQEQNLAACQNGMNIY
FYTIKPIPANQELLVWYCRDFAERLHYPSSRELTMMNLTQTHVNPKQHSADKDELYQKSI
PKKEHSVKEILKMESNPPKGKDFFQTNISPVTPEKDLDDLHKNYSPERCFFPRVVYPIRP
HIPEDYLKASLAYGMDRPSYITHSPIQASTTPSPSGRSSPDQSLKSSSPHSSPGVTVSPL
APTSQEHREPYPYLNGSYGSEGLGSYPGYAPPGHLSPAFLPSYNPHYPKFLLPPFNMSCN
NLSALNNINGINNFNLFPRMYPLYGNLLSGGSLSHHMLNPTTLPSSLPGEGGRRLLQPDH
PRDFLIPAPNSAFSITGAAASMKDKPCSPTSGSPTAGTAASSEHIMQPKPTSVVLAATGG
EEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPF
KCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKL
CPAKFTQFVHLKLHKRLHTRERPHKCIHCHKSYIHLCSLQVHLKGNCPVAPASGLSMEDL
NRINEEIEKFDISDNADKLEEVEDNIDLTSIVEKDILTMLRREMEGANLKVSLQRNLGNG
LISSGCNLYESSDMSVMKLPHGHPLPLLPVKVKQETIEPMDP
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaaaggctgttttctttttttccaggctgctacacagtgtagctcggacgct
gtgagtttcaagaatctggtgaaagggagagagtggacaatgaaaatggacatggaggat
gctgacatgactctgtggacagaggctgattttgaagagaagtgcacatatattgtaaat
gatcacccgctggatcccagtgccgatggaggcaccctaactcaggcagaggcttccttg
ccaaggaacttgactttcaaatatgcatctaactgcaaagaggtcactggagttataagc
aaagagtacatcccaaaaggaacacgctttggacccctggtaggagagatctataccagt
gatacggttcccaagaatgcgaacagaaaatacttttggcggatctactcaagtggtgaa
cttcaccacttcattgatggatttaacgaggacaagagcaactggatgcgttatgtaaac
cccggctactctgttcaggagcagaacttggctgcttgtcagaatggaatgaacatctac
ttctataccatcaagcccatccctgccaaccaagagctgcttgtgtggtattgccgagac
tttgcagagaggctgcactatccctcctccagagagctgacaatgatgaacctcacacaa
acccacgttaatccaaagcagcacagcgctgataaagatgagctttatcagaaaagcatc
ccaaagaaggagcacagtgtgaaagaaatcctgaaaatggaatccaatcctccaaaagga
aaagacttctttcagaccaacatttcaccagttactccagaaaaagacttggatgattta
cataagaactatagcccggagaggtgtttcttccctcgagttgtctacccaatccgacct
cacattccagaagactatctgaaagcttccttagcatatggcatggacagacccagctac
attactcactcgcccatccaggcatctactacaccgagtccttccgggaggagcagccca
gaccaaagtttaaaaagttcaagcccccacagtagtccaggggtcacggtttcgcctctg
gcacctacttcccaagagcacagagagccatacccttacttgaatggatcatatggctca
gaaggattggggtcttatcctggatatgcaccccctggccacctctcacctgcctttcta
ccgtcctacaatccccattaccccaaattcctgttacctccattcaatatgagctgtaat
aacctgagcgctttgaacaatatcaatggcatcaacaatttcaatctcttcccaaggatg
tatcctctttatggcaacctgctcagtggaggtagcctttcccaccacatgctgaaccct
accacgctccccagctcattgcccggtgaaggaggccgtcgactgctgcagcctgatcat
ccaagagacttcctcataccagcacccaacagtgccttctctatcacaggcgctgctgcc
agcatgaaggacaagccatgcagccctaccagtgggtcccccaccgctggtacagcagcc
agttcagaacacataatgcaacctaaacctacctcagtggtgttggctgccaccggcggt
gaagaagccatgaatctcattaaaagtaagaggaatgtgaccggttacaaaaccctccca
tacccactgaaaaagcagaatgggaagatcaagtacgaatgcaatgtttgctccaagacc
tttggccagctctccaatctgaaggtgcacctccgagtacacagcggagagagaccattt
aaatgccagacttgcaataagggcttcacacagctggctcacctccagaagcactatctg
gtacacacgggagaaaaaccccacgagtgtcaggtttgtcacaagcggttcagcagcacc
agcaatctcaaaacccacctgcggctccactctggagagaagccttaccagtgcaagctc
tgcccggccaaattcacccagtttgtgcacctgaagctgcacaagcgtctccacacccgg
gaacgcccccataaatgcatccactgccacaagagctacattcacctctgcagcctccag
gtccacctgaagggcaactgccccgttgcccctgcctctggcctctccatggaggacctg
aaccgaatcaatgaggagattgagaagttcgatatcagtgacaatgctgacaagttggaa
gaagtggaggacaatatcgacttaacgtcgatcgtggagaaggatatactgaccatgctc
aggagggaaatggaaggagctaatctgaaagtctctctacagaggaacctgggaaatggg
cttatctcctcaggatgcaacctttacgagtcgtcagatatgtcagttatgaagttgcct
cacggtcacccactacctctgttacctgtaaaggtcaagcaagaaacaattgaaccgatg
gacccttaa
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