Corvus cornix (hooded crow): 104691795 Help Entry 104691795         CDS       T03546                                  Symbol NLRC5 Name (RefSeq) protein NLRC5 isoform X1   KO K22615   NLR family CARD domain containing 5 Organism ccw  Corvus cornix (hooded crow) Brite KEGG Orthology (KO) [BR:ccw00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:ccw04054]     104691795 (NLRC5) Pattern recognition receptors [BR:ccw04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    104691795 (NLRC5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_6 NACHT Atypical_Card LRR_4 NLRC4_HD2 NPHP3_N LRR_8 AAA AAA_16 AAA_22 AAA_30 NOD2_WH nSTAND3 AAA_19 RNA_helicase ATPase_2 AAA_5 Motif Other DBs NCBI-GeneID:  104691795 NCBI-ProteinID:  XP_039414477 LinkDB All DBs Position 11:6617194..6653407 Genome browser AA seq 1859 aa AA seqDB search MQPPFQDDDLDLRAAVARARPQLVEFLSHCPDWLLMTSQPFVPEAALRSLGGITDHKEKA SVLLDLLEKAGPAAWKHFAQSVCMEYDLPLDLEILLMSSAGEGNFSQTEEASTDTRVQSS VPKGSARRRHCSSSGGDKDAKQQRLDSSAKYRHLLIDSIRQRYGSRREAGAEAQEQTQPP FNQAFVNVVIHQRKVPRLKERTEKPREDVAGAPEPEECADTAMKVSDLFCSEAPSDTTKV VFLFGKPGTGKTRLMHRICQKWAEGVLPHFLFTFLFEFRQLNLLKRKLTLKELLFDMFLQ PEDSPDAVFQDLLENAQQTLIIFDGLDEFAANMDVSFSSKRGPAVTSPMSIAQLFADLCH GKLLPGCTVLVTSRPKRLPDFLLCTVGVLAEIWGFDHKKVEEYISHYFRQHSFRERAIAH VKNNTKLLSMCFIPALCNIVCICLEYLLLKHQMSVELPQTMTQFYIKMFLIFLNKQQGDC AGDEETQLNCNKKAILGLFDLALRGLEEKKLVFYVDDIPEDVKEFASLHGLLTLFEVKTS GTCPEVGYAFVHLSLQEFFAALCLMVSRRVDKNYLKKKFFLKSKWTLKNETKTEFMESFH IFLSGLSSKECRTFLMLLAEQDEAWVQEKQDVILQSLKKLAATHLTGPKVLELCHCTFET QNLDVAQHIGSLLNFKYEFKNFRLTTLDMSALVFVINSGQDLTCLDFAGCLVDLECLEVL AGCKNVEHLSFRSRRCGDDFAAALSKGLRGMGSLRKLELTGGSITAEGMTNLVQSASHCL QLEEINLQGNRIRDPEVKRVMDLFSRMEKLKKVDLSNNHLSLNAVLSLAKEGIVCQNVTE LCVRVDTAIICFSGASEKSPRSLDLKLEENKEHVIPTRHVKLCLQDHRLSSQHAKRIVAI LQSCSCLSEVDLSGNKLGDEGCSCLLESLTCISISKQLNLSQNHLSVTGICNLLKSVNTC PKVMEVQVSLCRDIAVLRFREDREFASIPPREESVFSTDDQQHGEENQTTNNSPKIRLTD CNFQASDLKNLCAVLKECGRISELDLSCNYLGDEGLLQLFQCLPKLKMLRSLKFNNNQIS LNSVFFLAQSLSTLQHIKTVSLSLGRTQVVHLTFWERVRSTGRWRSGSLAHPKEEAKGRC FCLRDCRVGPEDVTRLCQILAQCPQLTEIDLTGNSLSVQSLERLLSFLPSLCHLTLLSIR RNPLSPHCAVLLLNSINLCERVRVVEVWSSENAFLHLGASMRSQRTSCRLTGCAIGEGQV EELCNILEQHGWLAEVDLSRNQLGDEGLRCLLDHLHRVPGTCSLNLSHNGISQDGVLHLI NAFVTSGNTTEVQVSLCSKATLIIKLTSGDDPRKILRLAECNFQPEHSEKLFSLLEKCTG LTEYTSSNNNVTVQAAERLLHSLSKDLGLLKISIEEPWVCKERVMNLLELAVQVSGNITE ITICKDKTLFQLVISFPNCLEKVESVISRLSLYKPEIKNSSFCQRLCEKCAQLQELRWSH VELHEDEAEMLVRILLPLPELKMFGLTSSSVTPTGIDYLISGLQNCQAIEELNLESMKLS SAAIPELVLGLCEMPSLKRLSLNHNSIGNDGCSRLAGTLRNMHNMEEINLSHNKIGDPGL INLAAVLLEMQNLKKIDLSGNCPSPAGGEKLMEALAHCKHIKELLLSRNGFGDRTAVTLA LCLPHMTNLKILHFQNNNIGQAGGLELARALVVCGLLEEISLAENHLGEQSIHALSEGLP CFKRLQKIDLKFCGITDDASRSLSLGFRQCPSMEEIILSWNALGDGGARELATALPEMAK LKVLDLEKNRIGACGAKKLAEKLAKCPEIQFIRLWDNPVPKGLAESLTRQDSRLCFSFS NT seq 5580 nt NT seq  +upstreamnt  +downstreamnt atgcagcccccatttcaggatgacgatctagacctgagagcagctgtagcaagagcccgc ccccagctcgtggagttcctcagtcactgtcccgactggctgctcatgacttcccagccc tttgtccccgaggcggccctgaggagcctgggtggcatcactgaccacaaagaaaaagcc tcagtgctccttgacctgctggagaaggctggtcctgctgcctggaaacactttgcacag tccgtttgcatggagtatgacctgcccctggatctggagatcctgctcatgagttctgca ggagaaggcaacttcagccagacagaagaagcatccacagatacaagagtccagtcatct gtgccaaaagggtctgctcgccgtcgccattgcagcagctctgggggtgacaaggatgcc aaacagcaacgactggattcatctgcaaagtaccggcatctcctcattgattctatccgc cagaggtacggaagcaggagagaagcaggagcagaagcacaggaacaaacacagccacct ttcaaccaagcctttgtcaacgttgtcattcatcagagaaaagtcccccgcttaaaagag agaacagagaaaccccgagaggatgtggcaggtgctcctgagccagaagaatgtgcagat acagccatgaaagtgtcagatctgttttgtagtgaggccccatcggacacgacaaaggtg gtctttttgtttggtaaaccaggtacaggcaagaccaggctaatgcacaggatttgtcag aaatgggcagaaggtgtcctacctcactttctcttcactttcctgtttgagtttcggcag ctgaatttgttgaaaagaaaattgaccctgaaggagcttttgtttgacatgttccttcag ccagaggacagccctgatgcagtgttccaggaccttctggagaatgcccagcagacactg atcatctttgatgggctggatgagtttgcagctaacatggacgtgtcattctcctctaag agaggcccagctgttacctcccctatgtccatagcccagctctttgcagacctttgtcac gggaagctcctgcctggttgcacagtgctggtcaccagccgacctaagaggctacctgac ttcttattatgtacagtaggtgtgttggcagaaatttggggatttgaccataagaaggtt gaggaatatatcagccactattttcgtcagcattcattccgagaacgagccattgctcat gtgaagaacaacaccaagctcctcagcatgtgcttcatccctgctctgtgtaacattgtg tgcatctgcttggagtatttgctccttaaacaccagatgagtgtggagcttccccagact atgacacagttttatatcaaaatgtttctcatcttcctaaacaaacagcagggagactgc gcgggcgatgaggagactcagctgaactgtaacaaaaaggccattttgggtctgtttgat cttgcactgagaggcctggaagagaagaaacttgtattttatgttgatgatattcccgag gatgtgaaggaatttgcttccttgcatggattgctgactctatttgaggtgaagacgagt ggcacttgcccagaggttggctatgcctttgtgcacttgagcttgcaggagttttttgca gcactgtgtctcatggtgagtaggagggtggacaagaattacttgaagaagaagttcttc ttgaagtcaaaatggactttaaagaatgagacaaagactgagtttatggagagttttcac atatttctctcgggcttgtcgtcaaaagagtgtaggacatttctgatgctgctagcagag caagatgaagcgtgggtgcaggaaaagcaggatgtgatcctgcaatctctcaagaaactg gcagccactcatctgacagggcctaaggtccttgagctctgccactgcacctttgaaacg caaaacctcgatgtagcccagcacattgggagcctgctgaatttcaagtatgagtttaaa aactttagactgacaactctggacatgtcggctttggtttttgtcataaactcgggccag gatttgacttgtttggattttgcaggatgtcttgtggaccttgagtgtttggaggttctg gctggctgtaaaaatgtggaacacttgagctttcgtagcaggagatgtggtgatgacttt gctgctgctctttcaaagggcttacgaggaatgggaagcctgaggaaattagagttgaca ggcgggagcatcacagctgaggggatgactaacttggtccagtctgcatcacactgcctc cagcttgaggaaataaacttgcagggcaatcggatacgggacccagaagtgaagagggtg atggacctgttttccagaatggaaaagctgaagaaagtagacctgagcaacaaccatctt tccttgaacgctgttctcagtttggcaaaggaaggcatcgtgtgtcaaaatgttactgaa ctgtgtgtcagggtggacaccgcgattatttgtttttctggcgcatctgagaaaagtcca agatctttggatttgaagttggaagagaataaagaacatgtaattccaactagacacgtg aagttatgcttgcaggatcacagactgtcttcccaacatgccaagaggattgtggccatt ctccagagctgttcctgtctctctgaagtggatttatcaggcaacaagcttggagatgaa ggctgcagttgcctgctggaaagcctcacctgcatatcgatttcaaaacagctgaatctc agtcaaaaccacctctctgtcactggcatttgcaacctgttgaagtcagtaaatacctgc ccgaaggtgatggaggtgcaggtcagcctctgtcgtgatattgcagtcctgaggtttaga gaagacagagagtttgcttccattcctcctagggaagagtctgtgttctctactgatgac caacaacatggggaggaaaaccagacaactaacaattccccaaaaataagactgacagac tgtaattttcaagccagtgacctgaagaatctgtgtgcagtcctgaaggaatgtggccgc atctccgagctggacctatcatgtaattatctgggagatgagggacttctgcagctgttt cagtgcctgccaaaactgaaaatgttacgttctctcaagtttaacaacaaccagatctcc ctgaactctgtgtttttcttagctcagtccttatctacactgcaacacattaaaacagtg agcctcagcttaggacgcacacaggtggttcacctgaccttttgggaaagagtcagaagc accggcagatggagaagtggttccctggcacatcccaaggaggaagcaaaaggacggtgc ttttgtctcagggactgcagagtgggtccagaggatgtgaccaggctgtgccagatcctg gctcaatgtccccagctgacagaaatcgatctgactggaaattcattgagtgtccagagc cttgagagattactgagctttctgccatccctctgtcatctgacactgctgagtattagg agaaaccccttgtccccacattgtgctgttttgcttctcaactccatcaacctctgtgag cgggtcagagtggtggaagtctggtcaagtgaaaatgccttcttgcacttaggagcaagc atgcgaagccaaaggacatcctgcaggctgacgggctgtgccattggggaagggcaggta gaggagctctgcaacatcctggagcagcacgggtggctggcagaagtagatctctccagg aatcagctgggagatgaaggcctgaggtgcctcttggaccacttgcatcgagtgcccggt acctgttccctcaatctcagccataatgggatttctcaggatggagtcctgcatctcata aatgcctttgtcacatctggaaacactactgaagttcaagtcagtttgtgctccaaagca actttaatcatcaagctgacaagtggagatgacccaagaaagattttgagactggcagag tgcaactttcagccagagcactcggaaaagctgttctcactcctggaaaagtgcactggt ctgacagagtacacgtcctcaaataacaacgtgacagtccaagctgcagaaagacttttg cattccctgagtaaagatctggggctgctgaaaatcagcatagaagagccatgggtgtgc aaagagagagtcatgaaccttcttgagctggctgtccaggtctctggaaacattactgag atcacgatatgtaaagataaaaccctcttccaattagtcataagtttcccaaactgcctg gagaaggtagaatcagtcattagcagactgagtctgtacaagccagaaatcaagaactcc tccttctgccaaaggctttgtgaaaaatgtgctcagcttcaggagctgagatggtctcac gtggaactccacgaggatgaagcagaaatgctagtcaggattttgctaccccttccagag ctgaagatgtttgggctgacctctagcagtgttacaccaactggaatcgattatttgata tcaggcttgcagaattgccaggccattgaagagctcaacctggaatccatgaaactcagc agtgctgccatccctgagcttgtcctggggctttgtgagatgccatccctgaaaaggctt agcttgaaccacaacagtatcggtaatgatggctgctccagactcgcaggaaccttgagg aatatgcacaacatggaggaaatcaatttaagccacaacaagattggagatccaggcctg ataaatcttgctgctgtcctgctggaaatgcaaaacctgaagaaaatcgacctttcaggg aattgtcctagtcctgctggaggggaaaagctgatggaagctcttgcccattgcaagcac atcaaggagttactactatcaaggaatggttttggagacaggacagcagtgacacttgcc ctctgtctgcctcacatgaccaacctgaagatcctgcacttccagaacaataacatcggg caggcaggagggctggagctggccagagccctggtggtgtgtgggctgctggaagagata agtttagcagaaaatcaccttggggaacagagtatccatgccctgtctgaggggctgcca tgcttcaaacgcctccagaagattgacttgaaattctgtggaatcactgatgatgcttca agatcactctctcttggcttccgacaatgcccttccatggaggagataatactgtcctgg aatgcccttggagatggaggagcccgagagttggccactgctctcccagagatggcaaag ctgaaggtgttagacctggagaaaaaccgcattggagcctgtggggccaaaaagctcgca gagaaacttgccaagtgcccagaaattcagttcataagactgtgggacaatccagtgccc aagggcctcgctgagagtttgacaagacaagactcaagactgtgtttctccttcagctag

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