Corvus cornix (hooded crow): 104691898
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Entry
104691898 CDS
T03546
Symbol
PKD1L2
Name
(RefSeq) polycystic kidney disease protein 1-like 2 isoform X1
KO
K04988
polycystin 1L2
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccw04040
]
104691898 (PKD1L2)
04091 Lectins [BR:
ccw04091
]
104691898 (PKD1L2)
Ion channels [BR:
ccw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104691898 (PKD1L2)
Lectins [BR:
ccw04091
]
C-Type lectins
Others
104691898 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Lectin_C
SUEL_Lectin
Ion_trans
REJ
GPS
PKD
Abhydrolase_9_N
AGA2
Motif
Other DBs
NCBI-GeneID:
104691898
NCBI-ProteinID:
XP_039414280
LinkDB
All DBs
Position
11:4750060..4789107
Genome browser
AA seq
2528 aa
AA seq
DB search
MLYCCCCGKMQRGRRNADDMTRMTSQAFEEGSKKSGALVSKTSAMQGTELRMWRGVTVLI
SLAVGLAGEEATDEGIPCSKYQQAFNHSCYEFVRLQQTFTSAQSWCERGGGHLVFIQNEE
TQEFLQKHIAEDQEWWIGLISNSLLNETTDGPVIWLDTSNISYSNWYKDQPSPFSSTCGY
ILKNAKYQWGVTENCSQEFDFICEFESGQSIACDKYNATVQCGSGEVIQIEDSFYGRKTP
HYCVSETSLQDERDEGCSWISVKDEVAGQCHGLQACQVAADGTFFGDPCPALGSYLSIQY
HCKEGLQLVMTDTCFVFENITVTLNWLLSPYSGNLSCTISTGDGHTIDPYYPLKLVSNIS
YRYSSPGEFTVFVECTTSEWHVMAQRQVTVQDKMDQLSITGCYSQYETGNSSHCRTLYGE
VLWIQVQLSGGNGVTYSMLADNMTLTESSAREGIVPYNLTLNSASQELLGPGIHQLEIRA
SRNTTVSEISESIAVHLIEPVSGIQAAVASHTLQLGEDLEVNVSVSRGAPEKVMFEVTGS
NKTHCHKADGPRGELRTYSVPVPSEGNFLVKVVAMNAFSNMSLDLGFITVLANSSHRKDS
AKKEGSYKTNTQKKNDHKIYIKPSRHVDPFTTVTLGWPDNNNNSSFLWTCGACWPAWNEC
VKQQTILINQSEVQIPPSCLPPPKSAVTVRITIRNHGNGERHDEQCLYVTAKQELQLEIR
CEANCKPVNVSDDVVLSVSGQEDSQAIYYNWYLDNTFQNKSTTLPLACGLTGFQQNSLNL
LQSNTSVLRMTSSFLQTQGEAFQIKITALTQRGYGEGWFLVSTVPAPEAPGCAVSPEHGS
VLTAFRVSCSAPGLEDLGQSSPSRQLTYCFYVTPNSLLDCSPDPGLFPVYLPLGEEENNF
ILHVTIIVSNNFGDTVQTNASVKVGPADMMDGNLTLQAVISDKANTILKDGNNSMSLFQL
YKSVTSVLNQQIQEESFNMSLQTNTRKELRGLMLTTLSVVNITSMQTALKMSEVLKEITY
RSEELSVSAQVEASHTLKHVSASLLAVNTEHSRDGQELKQAANYLFNAVSNVLKASVEIR
AGNNSVPEAEQSSVSHQLLSTVENLQSALLFGKVPGDEPTVLTSPSATMYMHRLQTEKME
STSINISNSNSASFTLPPASSLNVSGVDDETVDIRMVSFAMNPFFSSDISFDISGTVGGL
SLTDLDGLTIPVSNLKENIEIMLPRLSATQEDKILLNLGNYSTFQVNVTSGNTSIVIHLE
SEHDIPLILYLGYGYHPNETNYDMKNHLFCKKSSGGETNSWVLSPEELIFGEGTYYFIVL
QDMGMDSRVYDGLTINATCFASHCVFWDEHQGGWNSYGCHVGPKTNPSSTQCLCNHLTFF
GSSFFVIPNAIDVSKTAQLFGTFVDNPVVVTTVGFIFLIYVLVVIWARRKDLQDDAKVKI
TVLEDNDLFAQYRYLVTVFTGHRRGAATTSKVTLTLYGLDGQSEPHHLNDPDTRVFERGG
VDAFLLCTFLPLGELQSIRLWHDNSGDSPSWYVNRVSVHDLARDQKWYFLCNSWLAIDIG
ECVLDKMFPVATEQDLKQFSNLFFMKTSQGFQDGHIWYSVFSRSPRSSFTRAQRVSCCFS
LLLCTMLTSIMFWGVPKDPAEQKMDLGKIEFTWQEVMIGFESSLLMFPINLLIVQIFRNI
RPRPAQQGREKKPGKNGRVSPRLPPTPRAAQAASLTPEAVTKDIRRIANSLFKALKTPSL
TSAPDLEKSTNINTLLSLVADIICQQNRAGQGFYHESKKDGPISVTLGAVDIQEKARSPT
PEKRICEQLKYSDYHRCLYMQLQHVEMELELLGPHKFQMPQSYTQAVCQVQHLKNLLENQ
ICSSASISEGWSHTPNFSNDDKKSFSHRGLPWWFVFIAWFLVAATSGVSGFFTMLYGLHY
GKENSIKWLISMVISFLESLFITQPLKVLGFAAFFALVLKKVEHEDEENTAIDEPLSAPG
DSHPLFGAQRDSRSNIYRPPPAADVEKMKISCMKEKKAFALIREILAYLGFLWMLLLIAY
GQRDPNSYYLNKHIEDSFTDGFHDVYSYQDFFMWANTTLLKNLYGSYKGFITDGNSKLVG
SARIRQVRVRGGTCPISPRLQHVAEECRAPYSLQTEDTSAYGEHWNTSAFDNSSDLSSAW
QYQSQSKLRGHPIWGKFAIYSGGGYVIHLGTDPKNASRILQYLFKNVWLDTFTRAVFVEF
TVYNANVNLFCIISLMFESNALGAFFTSTELQSVRLYPYTNSLHIFVVAAEVIYFLFIVY
YMIVQGKLMKSLRWRYFHSKWNLLELAIILISWSALSVFVKRTVLGTRDISYYQEHKEDS
VSFSETARADAVLGYLIAFLVLLSTVKLWHLLRLNPKLNMITSALRRAWGDISGFITVIA
IMFLAYSIAANLIFGWKLYSYKTLFDSAETMVSLQLGIFNYEEVLDYNPVLGSFLIGSCI
IFMTFVVLNLFISVILVAFSEEQKHYQASEEEEIVDLMLMKLFSFFGIKCKKEEKPVTNG
QPEQPVSE
NT seq
7587 nt
NT seq
+upstream
nt +downstream
nt
atgctctattgctgctgttgtggcaagatgcaaagaggaaggagaaatgctgatgacatg
acaaggatgacatctcaagcttttgaagaaggcagcaaaaagagtggtgccctggtaagc
aagacgagtgcgatgcagggcactgagctgagaatgtggcggggagtcacagttctgatt
tctcttgctgtgggcttggctggggaggaagcaactgatgaaggaataccttgttcgaag
taccagcaagctttcaaccattcatgctacgagtttgttagactccagcaaaccttcaca
agtgcccagagctggtgtgagagaggaggagggcaccttgtctttattcaaaacgaggaa
acgcaagagttcttgcaaaaacatattgccgaggatcaggaatggtggataggactgatc
tcaaactccttgctgaatgaaactactgatgggccagtaatttggctggacacttcaaat
ataagctacagtaactggtacaaggatcagccatctcccttctcatccacatgtgggtac
atcctgaagaatgccaagtatcagtggggtgtgactgaaaattgcagccaggaattcgac
ttcatttgcgagtttgaatctggccagagcattgcttgtgataaatacaatgccactgta
cagtgcggatcaggagaagttattcaaattgaagacagcttctatgggcggaagacccct
cactactgtgtgtcagagacttctctccaggatgaaagagatgaaggctgcagctggatc
agtgtcaaagatgaagtagcaggccaatgtcacggtctccaggcctgtcaggtggctgca
gatggcactttcttcggagatccttgtccagctttgggaagctatttgtctattcaatac
cactgcaaggaaggtctgcagctggttatgacagacacatgttttgtctttgaaaatatc
acggtcactttgaactggctgctctcaccatactctgggaatctttcctgtaccattagc
actggagatggtcacactattgatccttactaccctctaaaactggtcagcaacatctca
tacaggtactcctctcctggggagtttactgtttttgtggagtgcaccaccagcgaatgg
cacgtgatggcacagaggcaggtgactgttcaagataagatggatcagctcagcattact
gggtgctacagccagtatgaaactgggaacagctcccactgccgtacgctgtatggggag
gtgctgtggatccaagttcagctcagtggaggcaatggggtaacctacagtatgttagca
gataacatgacgctgactgaatccagtgcaagggaaggtattgtcccttataacctgaca
ctcaacagtgcctctcaagagctgctaggcccagggatacatcagctggaaatccgagca
tccaggaacacgacggtgtcagagatctccgagagtattgctgttcatttaattgagcca
gtatctggaattcaagctgcagtagcttcccacactctgcagctgggggaggatttggag
gtgaatgtctctgtgtcccgtggtgccccagagaaggtgatgtttgaggtgactggatcc
aacaaaacccactgtcacaaagcagacggccctcgtggggagctgcggacatacagcgtt
cccgtgccctcagaaggtaattttctagtgaaagtggtggccatgaatgccttctcaaac
atgagtctggatcttggattcatcactgtgttggcaaatagttcccatagaaaagattct
gctaagaaagaaggcagctacaaaacaaatacccaaaagaaaaatgatcacaaaatatat
attaaaccgagtcgccatgtggatcctttcacaactgttacacttggctggccagacaac
aacaataattccagttttctctggacctgtggagcttgctggcctgcctggaatgaatgt
gtgaagcaacagacaatcctaatcaaccaaagtgaggtgcaaatcccaccttcctgcctt
cctcctccgaaatcagcagtgactgtcaggattaccatccgaaaccacggcaatggagag
aggcacgatgagcaatgtctctatgtgactgcaaaacaagaactgcaactggaaatcaga
tgtgaggcaaactgcaaaccagtgaatgttagtgatgatgttgttctgagtgtctctgga
caggaggactcccaggccatatattataactggtatttagataacacgttccaaaacaag
tctacaactctccctctagcctgtggtctgaccggtttccagcagaactctttgaatttg
cttcaaagcaacacatccgtgttgagaatgaccagctccttcttgcagacacagggggaa
gcttttcagattaaaataacagcactgactcagcgaggctacggggagggatggttcctg
gtgagcaccgtgcccgcacccgaagcccccggctgtgccgtgtcacccgagcatggatcg
gtgctcaccgccttcagagtctcctgcagtgctcccggcttggaggatttgggccagtcc
agtcccagcaggcagctcacatattgcttctatgtgacaccaaattctctcctggactgt
agcccggatcctggactcttcccagtttatcttccacttggagaagaggaaaataatttt
attttacatgtgacaattattgtcagcaataactttggtgatactgttcaaacaaatgct
tcagtgaaggttggacctgcagatatgatggatgggaacctgaccctgcaggctgtcata
tctgacaaggcaaacaccatcctaaaagatgggaacaacagtatgagtcttttccagctg
tacaagtcagtgacatctgtccttaatcagcagatccaagaggaaagttttaacatgtct
ttacagacaaatacacgaaaagagctccgagggctgatgctgacaactctctctgttgtt
aacataacatcaatgcagactgctctgaagatgtcagaggtattgaaagaaatcacttac
aggagtgaagagctgtctgtctcagcacaggtggaagccagccacactctgaaacacgtc
agtgcctccttgctcgctgtaaacacagagcacagcagagatggtcaggagttaaagcaa
gcagccaactatctgtttaatgcagtgagcaatgttcttaaagcttctgtagaaatcaga
gctgggaacaactcagtgccagaggcagaacagagttcagtgtcacaccagctcctaagt
acagttgaaaatctacagagtgcccttctgtttgggaaggtaccaggtgatgagccaaca
gtcctcacctctccttctgccacaatgtatatgcacagattacaaacagaaaagatggag
agcacatccattaacatctccaattccaactctgccagctttactctcccacctgcttcc
tctctcaatgtttcaggagttgatgatgaaacagtggatataaggatggtgagctttgcc
atgaatccctttttctccagtgacatcagttttgacatcagtggaacagtgggaggtcta
agtctaactgatctggatggtttgaccataccagtcagcaacctcaaagagaacattgag
atcatgttaccaaggctttcagcaacacaggaagataagattctgttgaatctgggcaat
tatagtacttttcaagtaaatgttacctcaggaaacacatctatagtgatccacctggaa
tctgaacatgacattccactaatactttacttgggctatgggtatcacccaaatgagacc
aactatgatatgaaaaatcatctgttctgtaagaaatcttctggaggtgagacaaacagc
tgggttctcagcccagaagaactcatttttggagagggaacctactatttcatagtttta
caagatatgggaatggattccagagtctatgatgggctaaccataaatgccacttgcttt
gcatcccactgtgtgttttgggatgagcaccagggaggctggaacagctatggatgtcat
gtaggaccaaaaacaaatcctagcagcacacagtgcctctgcaaccatctgaccttcttt
gggagctccttctttgtcatacccaatgccatagatgtcagcaaaacagcacagctcttt
ggtacatttgtggacaatcctgtggtggtgacaactgtaggattcatctttctgatatat
gtgcttgtagttatttgggctcgaaggaaagacctccaggatgatgccaaagtgaaaatc
acagtcctggaagacaatgacctgtttgctcagtatcgttaccttgtgacagttttcaca
ggacaccgccgtggtgcagccacaacctccaaggtgactctcaccctctatggactggac
ggacagagtgagccccaccatctaaatgatcctgatacacgagtctttgaacgtggagga
gtggatgctttcctcctctgtaccttcttgcctcttggggaactgcagagtattagattg
tggcatgataattcaggggacagtccgtcctggtatgtgaatcgagtatcagtccatgat
ctggcacgggatcagaaatggtacttcctctgtaactcttggctagccattgatattgga
gaatgtgtcctagataaaatgttcccggtagcaacagaacaggacctgaagcagttcagc
aatctgtttttcatgaagacctcccagggtttccaggatgggcacatctggtactcggtt
ttcagccgctccccacgaagctcctttacacgagcccagcgcgtgtcctgttgcttctca
ctgctcctctgcaccatgctgaccagcatcatgttctggggtgtgccaaaggatcctgct
gagcagaagatggatttgggtaagatcgagttcacatggcaggaagtgatgattggcttt
gagagctccctcctcatgttccccatcaacctgctcattgtgcaaatcttcaggaacata
cgaccccggccagcccagcaggggagagagaagaagccgggaaaaaatggtcgtgtatcc
ccacgcctgcctcccaccccacgggccgcccaggctgcctctctcaccccagaggctgtg
acaaaggacataagaagaattgccaactcactctttaaagccctgaagactccatctctc
acctcagcaccagaccttgaaaaatcaactaacatcaacacacttttgtcattggttgcg
gacatcatctgtcagcagaacagagctgggcaagggttttatcatgagagcaagaaggat
ggtcctataagtgtcacattaggtgctgtggatatccaagaaaaagcaagaagtccaact
ccagagaagagaatttgtgagcagctgaaatacagtgattaccatcgctgcttgtacatg
caactccagcatgtagagatggagctggaattgctggggccccataaatttcagatgcct
cagagttacacacaagctgtttgtcaggttcagcatttgaagaacctcctggagaaccaa
atctgctcatcagcatccatcagtgaggggtggtcccatactccaaacttctccaatgat
gacaagaaaagtttttcccacagagggctgccctggtggtttgtgttcatcgcttggttc
cttgtggcagccaccagcggtgtgtccgggttctttaccatgctctacggactccattat
ggcaaggagaactccatcaagtggctgatctccatggtcatctccttcctggaaagtctt
ttcatcacacagcccttaaaggtgctgggatttgctgctttttttgctctggttctgaag
aaagtggaacatgaggatgaagaaaacacagctattgatgagcctttatctgcaccaggt
gattcacaccctctctttggagcccaaagagacagcagaagcaatatttaccggccacct
cctgctgctgatgtggagaaaatgaaaatcagctgcatgaaggagaagaaagcttttgcc
ctcatcagggaaatcctggcctatctggggtttttatggatgctgttactgattgcctat
gggcagagagatcccaattcctactatttaaacaaacacattgaggacagctttacagat
ggattccatgatgtctacagttaccaggattttttcatgtgggcaaacactaccttactc
aaaaacctttatggatcatataaaggattcattacagatggcaattccaagctggtgggt
agtgcccgaattcgccaagtaagagtgagaggaggcacctgccccatttctcccagactc
cagcacgtagctgaggaatgccgtgctccatactccctacaaacagaagatacatcagct
tatggggaacactggaatacctcagcctttgataactcctctgacttgagctcagcatgg
cagtatcagagtcagtccaaactgagaggacaccccatctggggcaaatttgccatctac
agcggagggggatatgtgattcacctgggaactgaccctaaaaatgcctccagaattctc
cagtaccttttcaaaaatgtctggcttgacacgttcacaagagcagtgtttgttgaattt
acagtctacaatgccaacgtgaacctgttctgcattataagcctgatgtttgaaagcaat
gctttaggggccttcttcacaagcacagagctgcaaagtgtccggctctacccctacacc
aacagcctccacatctttgtggttgcagcagaagtcatttatttcctcttcattgtgtac
tacatgatagtacagggcaagctgatgaagagtctgagatggagatatttccatagcaag
tggaatctcctggagctggccattatactgattagctggagtgctctgtcagtgtttgtg
aaacggacagtccttgggacccgagacatcagctactaccaggaacacaaggaggactct
gtaagcttcagtgaaacagcgagagctgatgcagttcttggctacctgattgcattcctg
gtgcttctctccacagtgaaactgtggcatctgctgaggctcaaccctaaactgaacatg
atcacttcagcactaaggagggcatggggtgatatctctggattcatcactgttattgca
atcatgttcctcgcctattccattgctgcaaacctgatatttggatggaagctctactct
tacaaaactctctttgattcggcagagaccatggtcagtcttcagctgggaatcttcaac
tatgaggaggtcttggactataatccagttttaggctccttcttaattggatcctgcata
atttttatgacatttgtggtactgaatctattcatttcggtgattctggttgcttttagt
gaggagcagaagcactaccaggcttcagaagaagaggagattgttgatctaatgctaatg
aaactcttcagtttctttgggattaaatgcaagaaggaagagaagccagtcaccaatgga
caaccggaacaacctgtcagcgagtga
DBGET
integrated database retrieval system
