Corvus cornix (hooded crow): 104692024
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Entry
104692024 CDS
T03546
Name
(RefSeq) contactin-associated protein-like 4 isoform X1
KO
K24337
contactin associated protein-like 3/4
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
104692024
Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
104692024
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
EGF
F5_F8_type_C_2
COLFI
EGF_2
Motif
Other DBs
NCBI-GeneID:
104692024
NCBI-ProteinID:
XP_010402050
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Position
Z:35287109..35503848
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AA seq
1312 aa
AA seq
DB search
MNVNMDSVTEIFLKLLFLLSVHHWHMAVVGNKYNCDDQLVSALPQSSFSSSSELSNSHSP
GFARLNRREGAGGWSPLVSNKYQWLQIDLGERTEITAVATQGGYGSSDWVTSYILMFSDS
GRNWKQYRQEESIWAFPGNTNADSVVYYKLQHSIKARFLRFVPLDWNPNGRIGMRIEVYG
CTYRSEVVGFDGKSCLIYTLNKKLINALKDVISLKFKTMQSDGILLHREGKNGDHITLEL
TKGKLSLLINLGDTKTHPSNAQINITLGSLLDDQHWHSVLIEHFNNQVNFTVDKHTHHFH
AKGEFSYLDLDYELSFGGIPVPGKSGTFSHRNFHGCFENIYYNGVNIIDLARRHKSQIYI
VGNVSFSCLEPQVVPVTFLSSSSYLALPGTSGQDEVFVGFQFRTWNKEGLLLSSKRHHSS
GGFLLYLSDGRVKINLHKTGRILSDITAGAGLNNGQWHSVSLSVKRNRISVRVDNDGTSS
AHVSIPLQIYSGDVFYFGGCPSSGNISECNTSFGGFQGCMRLISIGNKAVDMISVQQNGF
GNFSDLQIDLCGITDRCLPNYCEHGGECSQSWNSFHCNCANTGYKGATCHYPIYEQSCEA
YKHRGNTSGFYNIDSDGSGPLGPFLVYCNMTDATWTIIQHNSTNLTRVKSANRENPHTVS
FKYSASLDQLQATINLADHCEQELAYYCKKSRLLDKSDGMPLSWWIGRTNETHTYWGGSL
PAVQKCACGLEGNCIDSQHYCNCDADRDEWTNDTGFLSYKDHLPVTEIVITDTGRPNSEA
AYKLGPLLCHGDRTFWNSASFNTETSYLHFPTFHGELSADVSFFFKTTASSGVFLENLGI
QDFIRIELHSPYEVVFSFDVGNGPTEVIVQSHNSLNDNQWHYVKAERNVKEASLQIDQLP
QRSHSAPPDGHIRLQLNSQLFVGGTASRQKGFLGCIRSLQLNGMALDLEERAKITPGVEP
GCPGHCSSYGNLCHNGGKCREKYSGFSCDCTFSAYAGPFCKKEISAYFWTGSSVTYNFQE
YYTLAKNSSSHASSFYADMTLTREAITFAFRTTRTPSLLLYVSSFYKEYLSVILTRNGSL
QIRYKLDSHQNPDVFNISFKNMADGQLQHVKINREEEMLSVEVNQNERMTFILSSGTEFN
AIKSLTLGKILENSDVDEETMKANSQGFIGCLSSVQFNHIAPLKAALRHSSSAPVIVKGR
FTESNCGALTGADSTSSETTHSFADHSGPIDEGKPLANAIRSDSAIIGGVIAVVIFILFC
ITAIAIRIYKKKGIYSKNEAKGSENEDSAESALKSELSMQNTANENQKEYFF
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgaacatggattctgtcactgaaatcttcttgaagctgctctttctcctgtct
gttcatcactggcacatggcagtggtggggaataaatataattgtgatgatcagttggtg
tctgctttgcctcagtcatcattcagtagttcatcagagctgtctaacagtcacagccct
ggatttgcaaggcttaatcgaagagagggtgctggtggctggtctccacttgtgtccaat
aaatatcaatggcttcagattgatcttggtgaaagaactgagattactgctgttgctact
caaggtggttacgggagctcagactgggtaacaagctacattctgatgttcagtgacagt
ggtcgaaactggaagcagtatcgtcaagaagaaagcatttgggcctttcctggaaacaca
aatgcggacagtgtcgtatactataaacttcagcattctattaaagcaagatttctccgt
tttgtgcctttggactggaatccaaatggcaggattggaatgcgcattgaagtgtatgga
tgcacatacaggtctgaggtggttggctttgatgggaaaagttgtctaatttacacatta
aataaaaaactcattaatgcactgaaagatgtgatttctctgaagtttaaaacaatgcaa
agtgatggaattctcctccacagagaaggaaaaaatggagaccacatcaccctggaatta
actaaagggaagctgtccctactcattaatttaggtgatactaaaactcatccttctaat
gcccaaattaatattacgctgggcagccttttggatgatcaacactggcattctgttctc
attgagcattttaacaatcaagtaaactttacagtggataaacacactcatcattttcat
gcaaaaggagaattcagttatttggaccttgattatgagctcagctttggagggatccca
gtgcctggaaaatcagggacattttcacacaggaactttcatgggtgttttgaaaatatt
tattataatggagtgaacattattgacctggccagaaggcataagtctcagatctacatt
gtgggcaatgtgtctttctcatgtttagagccacaggtggttccagtaacatttctgagc
tccagcagttacctggcactgccaggcacatcagggcaagatgaagtatttgtcggtttt
cagtttcgcacttggaacaaggaaggacttctgttatccagtaaacggcaccattcttca
ggtggtttcctcttatatctgagtgatgggagagtcaaaatcaatcttcataaaacagga
agaatactgagtgacatcactgcaggtgctggattaaataatggccagtggcattctgta
tctctctctgtcaaaaggaatcgtatcagtgtaagagtggacaatgatgggacctcgtct
gctcatgtctccatacctctgcagatttattcaggagatgttttctactttggaggttgt
cctagcagtggaaacatttctgaatgtaatacctcatttggtggttttcaaggatgcatg
cgacttatttccattggtaacaaagcagtggatatgatctctgttcagcaaaatggtttt
ggcaatttcagtgatcttcagatagatttatgtggcattacagacaggtgtttgcctaat
tactgtgaacatggtggtgagtgctcacagtcctggaacagttttcactgtaactgtgcc
aatactggttacaagggagctacttgccactatcccatctatgagcaatcatgtgaagcc
tataagcacagagggaatacttcaggcttttacaatattgattcagatggaagtggcccc
ttgggaccatttctcgtatactgcaatatgacagatgcaacgtggacaattatacagcat
aacagcaccaacctaaccagagttaaaagtgctaatcgagagaacccacacaccgtgtct
ttcaagtattctgccagcctagaccagcttcaggctacaataaaccttgcagatcactgt
gaacaggagcttgcttactactgcaaaaaatcaaggcttttagataagtcagatgggatg
cccttgagctggtggattggaagaaccaatgaaactcatacttactggggaggttccttg
cctgctgtacaaaaatgtgcttgtggattggagggaaactgtattgattcccagcattac
tgcaactgtgatgcagacagggatgaatggactaatgatactgggttcctctcctacaag
gaccatctaccagtaactgaaattgtgatcacggatactggcagaccaaactcggaagca
gcttacaaactggggcctttgctttgccatggtgatagaacattttggaattcagcttcc
ttcaacacagagacatcctacctgcatttccccaccttccatggagaactcagtgcagac
gtctcatttttctttaaaactactgcttcctcaggagtgtttttagagaacctgggaatt
caagacttcataaggatagagttacactctccatatgaagtggttttttcatttgatgtg
ggaaatggacctaccgaagtcatagtgcaatcacacaattctttaaatgacaaccaatgg
cattatgtgaaggctgaacgaaatgtcaaagaggcttccttacaaatagatcaacttcct
caacgatctcacagtgctccacctgatggacatattcgcttgcagctcaacagccagctt
tttgtaggtggaacagcatccaggcagaaaggatttttgggttgcattcgttcattacag
ttgaatggaatggctcttgatctggaagagagagcaaagataacaccaggagttgaacca
ggctgtcctgggcattgtagcagctatggtaacttgtgtcataatggtggaaaatgtaga
gagaaatacagtggattctcctgtgactgcacgttctcagcctatgctggtccattctgt
aagaaagagatctctgcctatttttggactggctcttctgtgacatacaactttcaagaa
tactacacgttagctaaaaattccagttctcatgcttcttctttttatgctgacatgaca
ctgaccagggaagcaattacatttgcttttcgaacaacgcggacgccaagcttactgctt
tatgtcagctccttctacaaggaatacctctcagtcattctcaccaggaacggaagttta
cagattaggtacaagctagatagccatcaaaatcctgatgtcttcaacatcagtttcaaa
aacatggctgatggacaactgcagcatgtgaagattaatagagaagaggaaatgctctct
gtagaggttaaccagaatgaaagaatgacgtttattctgtcttcaggcacagaattcaat
gcaatcaagtctctcacacttggcaagattttagaaaacagcgatgtagatgaggagact
atgaaggcaaactctcaggggtttattggctgtctctcttcagtgcagttcaaccacatt
gctcctttgaaggctgcactgcgccacagcagctcagcccctgtcattgtaaaagggcgt
ttcactgaatccaactgtggtgctttaactggagctgactcaacatcaagtgaaacaacc
cattcatttgcagatcactctggaccaatagacgaggggaagcccttagctaatgcaatc
agaagtgactctgcaattattggaggtgtgatagcagttgtcatattcatcctattttgc
atcacggccatagccatacgcatttataaaaaaaaaggcatatactcaaaaaatgaggca
aaaggatctgaaaatgaagacagtgctgaatctgctttgaaaagtgaactcagcatgcaa
aacacagccaatgaaaatcaaaaggaatacttcttctga
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