Corvus cornix (hooded crow): 104692169
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Entry
104692169 CDS
T03546
Symbol
CADM1
Name
(RefSeq) cell adhesion molecule 1 isoform X1
KO
K06781
cell adhesion molecule 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104692169 (CADM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccw04515
]
104692169 (CADM1)
Cell adhesion molecules [BR:
ccw04515
]
Immunoglobulin superfamily
Nectin family
104692169 (CADM1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
Ig_5
Izumo-Ig
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
104692169
NCBI-ProteinID:
XP_039420683
LinkDB
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Position
24:complement(461819..597462)
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AA seq
488 aa
AA seq
DB search
MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGDGQNLVTEDVTVVEGDVATISCR
VKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQ
LYTDPPQEIYTTITVLVPPRNLVIDIEKETAVEGEEIELNCTAMASRPATTIRWFKGNKE
LTGKSEVERWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVR
VSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKT
DNGTYRCEASNAVGKSHADYMLFVYDPPTTIPPPTTTTTTTTTIPTTITDTTATTEPAVH
GFTQLPNSAEELDYGDLSGTPVPPTASTEALPTVQLSNASLAFRPDSRAGEEGAIRSVDH
AVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNS
EEKKEYFI
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcgcgcccagcccagcggccccgcgggcagcggcggcggcgccccggggctc
ctcccgctgctcctgctgctcctctccgccgccgccatcatccccagaggtgatggtcag
aacttggtgacggaggacgtgacagtggtggagggggatgtggccaccatcagctgtcgc
gtcaagaacagcgatgactcggtgatccagctcctgaaccccaacaggcagaccatctat
ttcagagatttcaggccgctgaaggacagcaggttccagctggtgaacttctccaacagc
gagctccgagtgtccctgacgaacgtgtccatctctgatgaagggaggtacttctgccag
ctctacaccgaccccccccaggaaatctacaccacgatcacggtgctcgtcccaccacgc
aatctggtaattgacatcgagaaagaaactgccgtggagggagaggagatcgagctgaac
tgcaccgccatggccagcagaccagccaccaccatcagatggttcaaaggcaacaaggag
ctaaccggcaagtcggaggtggagcggtggtccgacatgtacaccgtgaccagccagctc
ctgctgaaggtggggcgggaggacgacggggtccctgtcatctgcctggtggatcaccct
gcggtcaaagacttgcagacacagcgttacctggaagtcatgtataagcctcaagtgcgg
gtttctcagaattaccccttgcaaggcctgacgagagaaggggagccgctggagctgacg
tgcacagcctttggaaagccacagcctacggacatgaggtggttaagagtagatgatgag
atgcctcaacacgttgtagtgtctggttcaaaccttctcattagtaacctaaacaaaaca
gataatggtacataccgctgtgaggcttccaacgcggtggggaaatcacatgcggattac
atgctgtttgtatacgatccccccacaactatccctcctcccacaacaaccaccaccact
accaccaccatccctaccaccatcacagacacaacggcgacgacagaaccggcagttcac
ggctttactcagttgcccaattcggccgaggagctggactatggggatctctcaggtaca
cctgtcccgcccacagcttcaaccgaggctctgccgaccgtgcaattaagtaatgcctcc
cttgccttccgcccagattcccgtgcaggtgaggaaggggccatacggagcgtggaccat
gccgtggttggtggcgtcgtggccgtcgtcgtctttgcgatgctttgcctgctcatcatt
ttagggcgatattttgccagacataaaggtacatacttcactcacgaagccaaaggagca
gatgatgcggccgacgcagacacagccatcatcaacgcagaggggggacaaaacaactcc
gaggaaaagaaagagtacttcatctag
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