Corvus cornix (hooded crow): 104692174
Help
Entry
104692174 CDS
T03546
Symbol
DSCAML1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccw04515
]
104692174 (DSCAML1)
Cell adhesion molecules [BR:
ccw04515
]
Immunoglobulin superfamily
DSCAM family
104692174 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
DUF6410
Motif
Other DBs
NCBI-GeneID:
104692174
NCBI-ProteinID:
XP_039420716
LinkDB
All DBs
Position
24:complement(980191..1075187)
Genome browser
AA seq
2040 aa
AA seq
DB search
MWLVTFLLLYSLPKAHAEDVGTSLYFVNDSLQQVTFSSTVGVVIPCPAAGSPSAVLRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITSYGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTMLDSFQSREVKAGR
LVELPCIASGYPNPAVRWIKDGRPLPADSRWTKRITGLTISDLRVEDSGTYICEVTNTFG
SAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVILSCALSGSPEYVIRWYRNTDLVAVDDYI
SIRGISNETLLITAAQKSHSGAYQCFATRKSQTAQDFSIITLEDGTPRIVSSFSEKVVNP
GEQFSLMCAAKGAPPPTVTWALDDEPIPRDSGHRSNQYTMSDGTTVSHMNVTSPQIKDGG
VYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKD
SLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGQTKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITT
KDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPITSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVP
SSASSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQY
LLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAI
KWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFK
LESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQ
GWSSGGCPITAIVLEYRPKGNWVWQSLRTNSSSEVFLTELREATWYELRMKACNSAGCGN
ETTQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATIPVTD
TEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTRNRYSS
QWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVSTESASS
TYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTTDNADSMTSMSTPSEPGI
CRFTASPPKPQDSERGKGVAVPIPHRASKSDYCNLPLYVKSEAFFRKPDAHEPCPVVPPR
EASIRNLARAYHAQARHMTLEPGAKPLGLPPPASAATTLPQRTLPMPGPAGPAPAPAASA
APAPPVAAEPPVAAAAAEARVPTHSKVGGSRDSLLEMSTSGVGRSQKQGAGAYSKSYTLV
NT seq
6123 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaacttttctcctgctgtactctttgccgaaagcacacgctgaagatgtt
ggaaccagcctctactttgtgaacgactccctgcagcaggtcaccttctccagcacagtg
ggggtggtgatcccctgcccggcagcagggtcacccagcgccgtccttcggtggtacctg
gccacaggtgacgacatctacgatgtgccccacatccggcatgtccatgccaatgggact
ttgcagctctaccccttctcgccatcagccttcaatagctttatccatgacaacgactac
ttctgcaccgcggagaactcggctggcaaaatcaggagcccaaacatccgtgttaaagca
gttttcagggaaccgtacaccgttcgggtggaggaccaaaggtcgatgcgtggaaacgtg
gctgttttcaagtgcctcatcccctcttcagtgcaggaatatgttagcgttgtatcctgg
gagaaagacaccgtttctatcatcccagaaaataggttttttattacttcttatggaggt
ttgtacatatcggacgtgcagaaggaagatgccttgtccacctacaggtgtatcaccaag
cacaagtacagcggggagacgcggcagagcaacggcgcccggctctccgtctcagacccg
gcggagtccatccccacgatgttagacagcttccagtccagggaggtgaaggcgggccgg
ctggtggagctgccctgcatcgcctcgggctaccccaacccagctgtgcggtggatcaag
gacgggcggccgctccccgctgacagccgctggaccaagcgcatcacggggctgaccatc
agcgacctgcgcgtggaggacagcggcacctacatctgcgaggtgaccaacaccttcggc
tccgcagaggtcacggggaccctcacggtcatagaccctctgcgtgtgaccctcacacca
aagaagctcaaaacaggcatcggcagcaccgtcatcctctcttgtgccctcagcgggtcc
cccgagtacgtcatccgctggtaccgcaacacggacctggtggcggtggatgactacatc
tccatccggggcatcagcaacgagaccctcctcatcacggccgcccagaagagccactct
ggggcctaccagtgcttcgccacccgcaagtcccagacggcacaggacttctccatcatc
acgctggaggatgggaccccccgcatcgtctcctccttcagcgagaaggtggtcaacccc
ggggagcagttctccctgatgtgtgccgccaagggggcccccccgccgaccgtcacctgg
gcgctggacgacgagcccatcccgcgggacagcgggcaccgctccaaccagtacaccatg
tctgatggcaccaccgtgagccacatgaacgtgaccagcccgcagatcaaggacggcggc
gtgtaccggtgcaccgcgcggaactcggtgggcagcgccgaataccaagcgcgaataaac
gtaagaggtcccccgagcatccgcgccatgaagaacataacagcggtcgcgggtagggac
actttcatcaactgcagggtcatcgggtacccctattactccatcaagtggtacaaggac
tctctgctgctgcccgataaccaccgccaagtggtctttgagaacgggaccctgaagctg
atggacgtccagaaaggcatggatgaaggagagtatctgtgcagcgtcctgatccagccc
cagctctccatcagccagagcgtccacgtcaccgtcaaagtccctccgctgatccagccc
ttcgagttcccacctgcctccatcggacagctcctctacatcccctgcgtggtctcctcc
ggggacatgcccatccacatcacctggaggaaggacgggcacgtcatcctctccggctct
ggggtcaccatcgagagcaaggagttcatgagctccctgcagatctccagtgtctccctc
aagcacaacgggaactacacctgcatcgccagcaacgacgctgccaccgtcagccgggag
cggcagctcatcgtgcgggtgcctcctcgttttgtggtccaacccaacaaccaagacggc
atttacggaaaagccggggtgctgaactgctccgttgacgggtacccccctccgaaagtc
atgtggaagcacgctaaaggaagtggcaacccccagcagtaccaccccatccccctgacg
ggccgcatccagatcctgcccaacagctccctgctcatccgccacgtcctggaggaggac
atcggctactacctctgccaggccagcaacggcgtgggcacagacatcagcaagtccatg
ttcctcaccgtcaagatcccagccatgatcacctcccaccccaacaccactatcgccatc
aagggccagaccaaggagctgaactgcacggcgcggggtgagcggcccatcatcatccgc
tgggagaagggggacaccgtcatcgaccccgaccgcaacatgcgctacgccatcaccacc
aaggacaacggcgacgaggtcatctccacgctcaagctgaaaccagccgaccgcggggac
tccgtcttcttctcctgtcacgccatcaactcctacggcgaggacagaggcttaatccag
ctcactgtgcaagagccccctgacccaccggagctggagatccgtgaggtgaaagcccgg
agtatgaatttgcgatggacgcagcggtttgacggcaacagcatcatcaccgggtttgac
atcgagtacaagaacaagtcagattcctgggatttcaagcagtctacacggaacatctcc
ccgaccatcaaccaggcgaacatcgtggacctgcaccccgcctccgtgtacagcatccgc
atgtactccttcaacaagatcggccgcagcgagcccagcaaggagctcaccatcagcact
gaggaagcagctcccgatggccctccgatggatgtcaccttgcagccgatcacgtcccag
agcatccaggtcacctggaaggccccgaagaaagagctgcagaacggggtgatccgtggc
taccagattggctaccgggagaacagcccaggcagcaacgggcagtacagcatcgtggag
atgaaggccacgggggacagcgaggtttacacgctggacaacctcaagaagtttgcgcag
tacggggtggtggtgcaggcgttcaaccgcgcgggcacggggccttcgtccagcgagatc
aacgccaccacgctggaggatgttcccagccagccccctgaaaacgtgcgggccatctcc
atcacctcggatgtggccgtgatctcctggtcggagcccccgcgcagcaccctcaacggg
gtgctcaaggggtaccgggtcatcttctggtccctctacatggacggagagtggggcgag
atgcagaatatcacgaccacgcgggagcgggtggagctgcggggcatggagaagttcacc
aactacagcgtgcaggtgctggcctacacccaggcgggtgacggcgtccgcagcagcgtg
ctctacatccagaccaaggaggacattccaggtcccccagctgggattaaggctgtgccg
tcctctgccagcagcgtggtggtgtcctggctgccgccggccaagcccaatggcatcatt
cggaagtacaccatcttctgctccagccccggctcggggcagccggcccccagcgagtac
gagaccagcccggaccagctcttctaccgcatcgcccacctgaaccggggccagcagtac
ctgctctgggtggccgccgtcacctccgccggccgcggcaacatcagcgagaaggtcacc
atcgagcctgcgggcaaagcccctgccaagatcatctccttcggaggcaccgtcaccacg
ccgtggatgaaggacgtgaggctgccgtgcaactccgttggggagccggtccctgccatc
aagtggaccaaggacagcgaggactctgccatcccggtgacagtggatggccaccgcctg
atccaggccaacgggacgctggtgctgcgctcggtgaaagccgaggactccggctactac
acctgcactgccaccaacacctggggcttcgacaccatcatcatcaacctgctggtgcaa
gtgcccccggaccagccccgcctgactgtctccaagacctcggcatcgtctatcacgctg
gcctggatccctggggacaatgggggcagctccatccgaggctttgtgctccagtactcg
gtggacaacagcgaggagtggaaggacgtgttcatcagctcctccgagcgctccttcaag
ctggagagcctcaagtgcggcacctggtacaaggtgaagctggcggccaagaacagcgtc
ggcgccggccgcatcagcgagatcatcgaggccaagacccacggcagagagccctccttc
agcaaggaccagcacctcttcacccacatcaactccacgcacgccaggctgaacctgcag
ggctggagcagcgggggctgccccatcaccgccatcgtcctggagtaccggcccaagggc
aactgggtgtggcagagccttcgcaccaacagctccagcgaggtgttcctgacggagctg
cgcgaggccacgtggtacgagctgcgcatgaaggcctgcaacagcgccggctgcggcaac
gagaccacgcagttcgccacgctggactacgacggcagcaccatcccccccatcaagtct
gcccaaggggaaggtgatgatgtgaagaagctcttcaccatcgcctgccccgtgatcctg
gccacgctgggagtggccctgctcttcatcatccgcaagaagaggaaggagaagcgactg
aagaggcttcgagatgcgaagagtttggcagaaatgctgatcagctttgacacgccggtg
aaggggcccccgcagggcccccgactgcacatcgacatcccgcgggtgcagctcctcatc
gaggacaaggaaggcatcaagcagctgggggatgacaaagccacgatcccggtgaccgac
acggagttcagccaggccgtgaacccccagagcttctgcacgggcgtctctctgcatcac
ccagccctgatccagaacacggggcccctcatcgacatgtccgacatccgccctggcacc
aaccccgtgtcaaggaagagtgtgaagtctgcacacagcacccgcaaccgctactccagc
cagtggacactcaccaagtgccaggcgtccacccccgcgcggaccctcacctcggactgg
aggacagtgggctcccagcatggcatcacggtcaccgagagtgacagctacagcgccagc
ctctcgcaggacacagacaaggggcggaacagcatggtgtccaccgagagcgcctcgtcc
acctacgaggagctggcgcgcgcctacgagcacgccaagctggaggagcagctgcagcac
gccaagttcgagatcaccgagtgcttcatctccgacagctcctcggaccagatgaccacg
ggcaccacggacaacgcggacagcatgacctccatgagcaccccgtccgagcccggcatc
tgccgcttcaccgcctccccgcccaagccccaggacagcgagcggggcaagggtgtggcc
gtgcccatcccgcaccgcgccagcaagagtgactactgcaacctcccgctgtacgtcaag
tcggaggccttcttccgcaagcccgacgcgcacgagccgtgcccggtggtgccaccacgg
gaagcctccatccgcaacctggcccgggcgtaccacgcgcaggcccggcacatgacgctg
gagcccggcgccaaacccctggggctgcctcccccggcctccgccgcaaccaccttacct
cagaggactctccccatgcccggcccggcgggtcctgcacccgcgcccgccgccagcgcc
gccccggctccccccgtggctgccgagccccccgtggctgccgcagccgccgaggcgcgg
gtgcccacgcactccaaagtggggggctccagggactcactgctggagatgagcacgtcg
ggggtaggcaggtctcaaaaacagggcgccggagcctactccaagtcctacacgctggtg
tag
DBGET
integrated database retrieval system
