Corvus cornix (hooded crow): 104692181
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Entry
104692181 CDS
T03546
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ccw04514
Cell adhesion molecule (CAM) interaction
ccw04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
104692181 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
104692181 (NCAM1)
04517 IgSF CAM signaling
104692181 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104692181 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccw04515
]
104692181 (NCAM1)
04090 CD molecules [BR:
ccw04090
]
104692181 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
ccw00536
]
104692181 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccw00537
]
104692181 (NCAM1)
04091 Lectins [BR:
ccw04091
]
104692181 (NCAM1)
Membrane trafficking [BR:
ccw04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
104692181 (NCAM1)
Cell adhesion molecules [BR:
ccw04515
]
Immunoglobulin superfamily
NCAM1/2
104692181 (NCAM1)
CD molecules [BR:
ccw04090
]
Proteins
104692181 (NCAM1)
Glycosaminoglycan binding proteins [BR:
ccw00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
104692181 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccw00537
]
Others
104692181 (NCAM1)
Lectins [BR:
ccw04091
]
I-type lectins (Siglecs)
104692181 (NCAM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
C2-set_2
C1-set
Ig_MYOM1
C2-set_3
V-set_CD47
Ig_PDGFR_d4
Fn3_ROS1
Receptor_2B4
Pur_ac_phosph_N
Muramidase
Motif
Other DBs
NCBI-GeneID:
104692181
NCBI-ProteinID:
XP_039420922
LinkDB
All DBs
Position
24
Genome browser
AA seq
1136 aa
AA seq
DB search
MLLLLAVLPCAFVLLRAAASLQVDIVPSQGEISVGESKFFLCQVAGEAKFKDISWFSPNG
ERLTPNQQRISVVRNDDFSSTLTIYNANIDDAGIYKCVVSSLEEGDSEATVNVKIFQKLM
FKNAPTPQEFKEGDDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGI
KKTDEGTYRCEGRILARGEINFKDIQVIVNVPPSVRARQSTMNATANLSQSVTLACDADG
FPEPTVTWTKDGEPVEEVEDEDKYSFNYDGSELVIQKVDKSDEAEYICIAENKAGEADAT
IHLKVFAKPKITYVENKTAMELEDQITLTCEASGDPIPSITWRTSTRNISNEEKASWTRP
EKQETLDGRIIVRSHARVSSLTLKEIQYTDAGEYVCTASNTIGQDSQAMYLEVQYAPKLQ
GPVAVYTWEGNQVNITCEVFAYPSAVISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPD
SENDFGNYNCTAVNRIGQESSEFILVQADTPSSPSIGRVEPYSSSAQVEFDEPEATGGVP
ILRYKAEWRALGEVEWHSRFYDAKEANVEGMVTITGLKPETTYAVRLSAVNGKGVGELSL
PAEFKTQPVRIPHPPPPPDLSAQPHGPHLGTEGEPSAPKLEGHIGEDGNSIKVNVIKQDD
GGSPIRHYLIKYKAKHSSEWKPEIRLPSGSDHVMLKSLDWNADYEVYVIAENQQGKSKPA
HYAFRTSAQPTVIPASTSPASGLGTAAIIGILVVVFVALLVAVDVTCYFLNKCGLLMCIA
VNLCGKSGPGAKGKDMEEGKAAFSKDESKEPIVEVRTEEERTPNHDGGKHTEPNETTPLT
EPEHPADTAATVEDMLPSVTTGTTNSDTITETFATAQNSPTSETTTLTSSIAPPATATPD
ANATAPGQATPAKGAAAASAASPPSSTPKVAPLVDLSDTPSSAPATSNLSSSVLPGQAVL
SPSTAVADAAKAGNKPAAPSPANLTSPPAPSEPKQEVAKSPEKEPVQPSTVKSPAETPKN
PSNVKSEAASGSAANPSQNEDFKMDEGTFKPPDIDLAKDVFAALGTATPPAASGAGGQAP
EPAAAAADSSAPAAPASTEKMPAEDKGAVQDRKSPPAEVKTVPNEATQTNENESKA
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgctcgccgtgctgccctgcgccttcgtcctgctgcgagccgcagcctct
ctccaagtggacattgttccaagccagggggagatcagcgttggagaatccaagttcttc
ttatgtcaagtggcaggggaggccaagttcaaggacatctcgtggttctccccgaacggg
gagaggctgaccccgaaccagcagcgcatctcggtggtgcgcaacgatgacttctcctcc
accctcaccatctacaacgccaacatcgacgacgccggcatctacaagtgtgtggtcagc
agcctggaggagggcgactccgaggccaccgtcaacgtcaagattttccaaaagctgatg
ttcaagaacgctcccacccctcaggaattcaaggaaggggacgatgctgtgattgtgtgt
gacgtggtcagctcactgccccccaccatcatctggaagcacaaaggcagggatgtcatc
ctaaaaaaggatgtgcggttcatcgtcctgtccaacaactacctgcagatccggggcatc
aagaagacagatgagggcacctacaggtgtgaggggaggatcctggcccgtggggagatc
aacttcaaagacatccaggtcatcgtgaatgtccctccctccgtgcgtgccaggcagagc
accatgaatgccactgccaacctcagccagtctgtcaccctggcctgtgatgccgacggc
tttcctgagcccaccgtgacgtggacaaaggatggagagcccgtggaggaggtggaggat
gaggacaaatacagcttcaactacgatggctccgagctggtcatccagaaggtggacaag
agcgacgaggccgagtacatctgcatcgctgagaacaaggctggcgaggccgacgccacc
atccacctcaaagtctttgccaaacccaaaatcacctacgtggagaacaagacagccatg
gagctggaggatcagatcacgctgacctgcgaggcgtcaggggaccccatcccctccatc
acctggagaacctccacgcggaacatcagcaacgaggagaaggcttcgtggacccggccc
gagaaacaagagacgctggacgggcggatcatcgtgcgcagccacgcgcgcgtgtcctcg
ctgaccctcaaggagatccagtacacggacgcgggcgagtacgtgtgcaccgccagcaac
accatcggccaggactcgcaggccatgtacctggaagtgcagtatgcccccaagctccag
ggccctgtggccgtgtacacctgggaaggaaaccaagtgaacatcacctgtgaggtgttt
gcctaccccagcgctgtcatctcctggttccgggacgggcagctccttcccagctccaac
tacagcaacatcaagatctacaacaccccctcagcaagttacctggaggtgaccccagac
tcggagaatgactttgggaactacaactgcactgctgtgaaccgcatcgggcaggagtcc
tccgagttcatcctggtgcaggcagacaccccctcgtccccgtccatcggcagagtggag
ccctattccagcagtgcccaggtggagttcgacgagcccgaggccacgggcggggtgccc
atcctcaggtacaaggcagagtggagggccctgggcgaggtcgagtggcactccaggttc
tacgatgccaaggaagccaacgtggaggggatggtgaccatcacggggctgaagcctgag
accacctatgctgtgaggctgtcagcagtcaatggcaagggcgtgggggagctcagcctg
cccgccgagttcaagacacaaccagttcgcatccctcacccacccccaccgccagacctg
tctgcccagcctcatggccctcacctggggacagaaggggaacccagcgcccccaagctg
gaagggcacataggagaggatggaaactccatcaaagtgaacgtcatcaagcaggacgat
ggtggctcccccatcaggcactacctgatcaagtacaaagctaagcactcctcggagtgg
aagccggagatccggctgccgtcgggcagcgaccacgtgatgctgaagtctctggactgg
aacgctgactacgaggtgtacgtgatcgctgagaaccagcagggcaagtccaagccagcc
cactacgccttccgcacctcggcccagcccaccgtcatcccagccagcactagccctgcc
tcaggcctgggcactgctgccatcattggcatcctcgtggtggtcttcgtggcgctgctg
gtggccgtggatgtcacctgctacttcctgaacaagtgtgggctgctcatgtgcatcgcc
gtcaacctgtgcggcaaatccggcccgggggccaagggcaaggacatggaggaggggaaa
gcggccttctcgaaggatgagtccaaggagcccatcgtggaggtgcggacggaggaggag
aggacccccaaccacgatggggggaagcacacggagcccaacgagaccaccccgctgaca
gagccagagcaccccgccgacactgcggccaccgtggaggacatgctgccttctgtcacc
acgggcaccactaactctgacactatcactgaaacctttgccactgcccagaacagcccc
accagcgagaccaccacgctgacctccagcattgccccgccggccacggccactcccgac
gccaacgccacggcccccggccaggccaccccggccaaaggcgcggccgccgcctcggcg
gcatcgccgccctcctccacccccaaagtggcccctcttgttgatctcagcgataccccc
agctctgctccggccaccagtaatttgtcttcaagtgtcctgccggggcaggccgtgctc
agccccagcaccgcggtggccgacgccgccaaagccgggaacaagccggccgcccccagc
cctgccaacctcacgagccctccagctccctcagagcccaagcaggaggtggccaagagc
cccgagaaggagcctgtgcagcccagcacagtgaagagtccagcagagacccccaagaac
ccgagcaacgtgaagagcgaggctgcctcgggcagcgccgccaacccctcgcagaacgag
gactttaaaatggacgaagggaccttcaagccaccagacattgatcttgcaaaggatgtt
tttgcagctcttggcactgctactcctcctgctgccagcggggctggtgggcaagccccc
gagcctgctgctgccgctgcagacagctctgcccccgccgcgcccgcaagcaccgagaaa
atgcccgcagaggacaaaggcgccgtgcaggacaggaagagccctcccgcagaagtgaag
acggtgcccaacgaagccacacaaacaaatgagaacgagagcaaagcatga
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