Corvus cornix (hooded crow): 104692260
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Entry
104692260 CDS
T03546
Symbol
CALD1
Name
(RefSeq) caldesmon isoform X1
KO
K12327
caldesmon
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
104692260 (CALD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccw04812
]
104692260 (CALD1)
Cytoskeleton proteins [BR:
ccw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
104692260 (CALD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
104692260
NCBI-ProteinID:
XP_010402466
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Position
1A:complement(71173213..71350464)
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AA seq
780 aa
AA seq
DB search
MDDFERRRELRRQKREEMRLEAERLSYQRNDDDDEEAARERRRRARQERLRQKEEGDLSG
EVTEKSEVNAQNSVAGEESKRSTDDEAALLERLARREERRQKRLQEALERQKEFDPTITD
GSLSLPSRREVNNVEENETTGKEEKAETRRGRYETEETETVTKSYQRNNWRQDGEEEEKK
EEKDKEEVQEEKPKELPVEENQVDVAAEKSTDKEEAVTVNAEEHKAENDTNALPEGTQSV
TDAVDKEKLRDEEKAEEERKEAEERERLKAEEEKRAAEEKQKAEEEKRAAEEKQKAEEEK
RAAEERARAEEEERAKAEEEKRAAEERERAKAEEERRAAEEKQKAEEEKRAAEERAKAEA
EKRAAEEKAKLEAEKLKEKQKMEEQKIEDKQVKEKKVEDKKPQAAFLKKQEEEKVEAKKE
KLPEEKLQATSIKDQVKDDKGKAPKEEMKSVWDRKKGVPEQKAQNGERELTASKLKPTEN
AFGRSSLKGTANAEEAKPGVEALKRLEDQRRRRGENESEELEKLKEKQQEAAAELDELKK
RREERRKILEEEEQKKKQEEAERKIREEEEKRRMKEEIERRRAEAAEKRQKMPEDGVSED
KKPFKCFSPKGSSLKIEERTEFLNKSAQKSGMKPTQTTAVVSKIDSRLEQYTSAIEGTKA
SRPAKASDLHVPAEGVRNIKSMWEKGNVFSSPSGTGTPNKETAGLKVGVSSRINEWLTKT
PESNKSPAPKPSDLRPGDVSGKRNLWEKQSVEKPAASSKVSAMGKKSETNAGLRQFEKEP
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggatgactttgaacgccgcagagaactcaggaggcaaaagcgtgaggaaatgcgcctg
gaagcagagaggctgtcctaccagagaaatgatgacgatgacgaagaagccgccagagaa
cgtcgccggcgggctcgacaggagaggctgcggcaaaaggaggaaggagatctctcagga
gaagtaacggagaaatccgaagtgaatgcccaaaacagtgtggcaggagaggaaagcaag
cgttctacagatgatgaagctgcactgctggagagactggcaagacgggaggagagacgc
cagaaacgtctgcaggaagccctggaacgccagaaggaatttgaccccacgatcacagat
gggagcttgtcactgcccagcaggagagaagtaaacaatgtggaggaaaacgagaccacg
gggaaagaggaaaaggctgaaacacgccgaggacgctatgagactgaggagacagaaaca
gttaccaaatcgtaccaaaggaacaactggaggcaagatggggaagaagaggaaaaaaaa
gaagaaaaagacaaggaggaggtacaggaggagaaaccaaaggagctccccgtagaggaa
aaccaggtagatgtggcagcagagaaatccacagataaagaagaggcagtaactgtaaat
gcagaggaacacaaagcagagaatgatacaaatgctctgccggaagggacgcaaagtgta
actgatgcagtagataaagagaagcttagggatgaagaaaaggctgaggaagaaaggaag
gaagcagaagaaagggagaggttaaaagcagaggaggaaaagagggcagctgaggaaaaa
cagaaagcagaggaggaaaagagggcagctgaggaaaaacagaaagcagaggaggaaaag
agggctgctgaggagagggctagggcagaagaggaagagcgggctaaggcagaagaggag
aagagggcagctgaggaaagagagagggctaaagcagaagaggagaggagggcagctgag
gagaaacagaaagcagaggaggaaaagagggcagctgaggagagagcaaaggcagaagcg
gaaaagagggcagctgaggaaaaggctaaactagaagcagagaaattaaaggaaaaacaa
aagatggaagaacagaaaatagaagataaacaggtaaaagagaagaaagtagaagacaaa
aaacctcaagcagctttcttaaaaaaacaggaggaagaaaaagtggaagctaaaaaggaa
aagctgccagaagagaagctccaagctacctccataaaagatcaggtaaaagatgacaaa
ggtaaagcacccaaagaggaaatgaaaagcgtctgggatcgtaagaagggcgttcctgaa
caaaaggcacagaacggagaacgtgagctcaccgcctccaaacttaaacctactgagaat
gcttttggccgctccagtttgaaagggactgcaaatgcagaggaggcgaagccgggggtc
gaggctctgaagaggttggaagatcagcgccgccggcggggcgagaacgagagcgaggag
ctggagaagctgaaggagaagcagcaggaggcagcagcagagctggatgaactgaagaaa
aggcgggaggagcgccggaaaatcctggaggaagaggagcagaagaagaagcaggaggag
gctgagaggaaaatcagagaggaggaggaaaagaggaggatgaaggaagaaatcgaaaga
agaagggctgaagctgctgagaaacgccaaaagatgcctgaagatggtgtatctgaagac
aagaagccgtttaaatgtttcagtcctaaaggttcatctctcaagatagaggagcgaaca
gaatttttgaacaaatctgctcaaaagagtggaatgaagcccacccagacaacagcagtt
gtctcaaagattgacagtagacttgagcaatacactagtgcaattgagggcacaaaggct
tcaagaccagctaaagcttctgaccttcacgttccagctgagggtgtccgtaatatcaag
agcatgtgggagaaagggaatgttttttcatcaccctctgggacaggaacaccaaataag
gaaactgctggactgaaggttggtgtctccagtcgtatcaacgagtggttgaccaagacc
ccagagagcaacaaatcacctgctccaaaaccttctgatttaagaccaggagatgtatct
ggcaaacgtaatctctgggagaagcagtcagtggagaagccagctgcttcttctaaggta
tcggctatggggaaaaaatcagagactaatgcaggtttgagacaatttgagaaagaaccg
tag
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