Corvus cornix (hooded crow): 104692413
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Entry
104692413 CDS
T03546
Name
(RefSeq) LOW QUALITY PROTEIN: bile acid receptor-like
KO
K08538
farnesoid X receptor beta
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104692413
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccw03310
]
104692413
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
104692413
Nuclear receptors [BR:
ccw03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
104692413
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
104692413
NCBI-ProteinID:
XP_010402745
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Position
26:4067224..4079933
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AA seq
698 aa
AA seq
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MKQCSWEQNMANTFVTIPDGYGLPEPIQYYDVLPEHINYQLQDPDFQAAPYCQYSAVPVP
ALQSQPAPSPYGSYSLDPPYPDGPCVGSSCELSKGPFLAPHVEDGGYQGLKRPRLNHSVR
LKGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYRCKSGGHCEMDMYMRRKC
QECRLKKCKAVGMLAECLLTEVQCKSKRLRKNFKQKSSFLCNIKLEDEGLNSKQVSSTTR
SGKIPEKMELTPGEHQLLDHIVAAHQKYTIPLEEAKKFLQETASPEESFLRLSETAVVHV
QVLVDFTKRLPGFESLASEDQIALLKGSTVEAMFLRSAQIYNQRMSECQPSTSESHVRLS
DHGTCCHVQNLDKNNIYSMEMCQNEERPTSTTTTGITEEFITALFCFYRTMGELKVTETE
YALLVATTVFFSDRPLLRDKRHVEELQEPLLGILYKHSKLQHPXGPQRFARLLGRLTELR
SLRHAHAGGAAPRGTRAWPRRCATSGISTRRRQRRRRRAPLPASGARRRFPPFSPSLSGR
REVPVPVVAATSVSVQMLASVPVSVLVPVLVPVLVSVWAPLSVPVSVLVLVPVVAAGVSV
GVGTSVGVATSIGAGVGFAAGIGTGGDVGVGVTTFLRAHGDRKAVQTALAAVPELRAGPA
AKLLRALGPRGCAEQMVPPAGPAELRAGGGTALPGTHC
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtgcagctgggagcagaacatggccaacacatttgtcaccatccctgacggg
tacggccttcccgagcccatccagtactatgatgttttaccagagcacatcaactaccag
ctgcaggacccggatttccaggctgccccttactgccagtactcagcagtcccagttcca
gccctgcagtcccagcctgccccatccccatacggctcctacagcctggatcccccgtac
cctgacgggccctgtgtcggcagcagctgcgagctcagcaaaggccccttcctggctccc
cacgtggaggatggggggtaccaggggctaaagaggcccaggttaaaccactcggtgagg
ctgaagggacaggaggagctgtgtgtggtgtgtggggacaaggcttcggggtaccactac
aacgcactgacctgcgagggctgcaaaggcttcttccggcgcagcataaccaagaacgct
gtgtaccgctgcaagagcggggggcactgcgagatggacatgtacatgaggaggaagtgc
caggagtgccgcctcaagaagtgcaaagctgtgggaatgctggcagaatgtttgctcact
gaagtccagtgtaagtcaaagcgactcaggaagaatttcaagcagaagagcagtttcctt
tgcaacataaagctggaagatgagggactgaatagtaagcaagtatcatctacaacaaga
tctggaaaaatcccagagaagatggaacttactccaggagaacatcagcttcttgaccac
attgtagcagcacaccaaaaatacacaataccccttgaggaagccaagaagtttctacag
gaaactgcaagtcctgaggaaagttttctccgtctgtctgagacagccgttgtccatgtc
caagtgttggtggatttcacaaaaagactcccagggtttgagagtttagccagtgaggac
cagattgctctgctgaaagggtccacagtggaggcgatgttcttgagatcagcccaaatt
tacaaccaaagaatgagcgagtgccagccatccaccagtgaaagtcatgtaagactttct
gatcacgggacatgttgtcatgttcaaaaccttgataaaaacaatatttattccatggaa
atgtgtcaaaatgaagagaggccaacttctactactaccacaggcataactgaggagttc
atcaccgccctgttctgcttctacagaaccatgggagaactcaaagtgaccgagaccgaa
tacgctctgctcgtagcaacaacagtgttcttttcagaccgcccgctgctgagggacaag
cgccatgtggaggagctgcaggagccgctgctggggatcctgtacaagcactcgaagctg
cagcacccgncgggaccgcagcgcttcgcgcggctgctgggacgcctcacggagctgcgc
tcgctccgccacgcccacgcggggggcgctgcgccgcgcgggacccgcgcctggccgcgc
cgctgcgcgacctctgggatctccactaggcggcgccaacgccgccggcgccgcgcgccc
cttcccgcctcgggtgcgcgccgtcgtttcccgcccttttcgccctccctcagcgggcgc
cgtgaggtgccggtgccggtggtggcggcgacgtcggtgtcggtgcaaatgttggcgtcg
gtgccagtgtcggtgctggtgccggtgctggtgccggtgctggtatcggtttgggcgccg
ctctcagtgccggtgtcagtgctggtgttggtgccggttgtcgctgctggtgtcagtgtc
ggtgtcggtaccagtgttggtgttgctaccagtattggtgccggtgtcggtttcgctgct
ggtatcggtaccggcggcgatgtcggtgtcggtgtcaccacttttcttcgggcccatgga
gacagaaaagccgttcaaaccgctcttgccgccgtgcctgagctccgggcagggcccgcg
gccaaactcctgcgagcgctcgggccgcggggctgtgccgagcaaatggtgccaccggcc
ggcccggctgagctgcgagcgggcggggggacagcccttccagggacacactgctga
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