Corvus cornix (hooded crow): 104692668
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Entry
104692668 CDS
T03546
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccw00535
]
104692668 (COL14A1)
Proteoglycans [BR:
ccw00535
]
Extracellular matrix (ECM) proteoglycans
Others
104692668 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Fn3_VIN3
VWA_3
Motif
Other DBs
NCBI-GeneID:
104692668
NCBI-ProteinID:
XP_039405849
LinkDB
All DBs
Position
2:141366988..141481902
Genome browser
AA seq
1883 aa
AA seq
DB search
MLCRYEIQSCFLLAFLAVTAFFISDVQGQVSPPTRLRYNVVSPDSVQISWKAPKGQFTGY
KLLVTPSSGGKTNQLILQNTATKAIIQGLIPDQNYALQIIAFSEDKESKPAQGQFRIKDI
ERRKDTSKSKVKDPEKTNASKPAPEGSLFTCKTPAIADIVILVDGSWSIGRFNFRLVRLF
LENLVSAFNVGSEKTRVGLAQYSGDPRIEWHLNAYGTKDAVLDAVRNLPYKGGNTLTGLA
LTYILENSFKPEAGARPGVSKIGILITDGKSQDDVIPPAKNLRDAGIELFAIGVKNADIN
ELKEIASEPDSTHVYNVADFNFMHTIVEGLTRTVCSRVEEQEKEIKGTIASLGTPSDLVT
SDVTARGFRVSWTHAPGKVEKYRVVYYPTRGGQPEEVVVDGSVSTAVLKNLMSLTEYQIA
VFAIYSNAASEGLRGTETTLALPMASDLQLYDVSQSSMRVRWNGVVGATGYMILYAPLTE
GLAADEKEIKIGETSTDLELDGLLPNTEYTVTVYAMFGEEASDPLTGQETTLPLSPPANL
KFFDVGHNSAKLTWDPASKNVNGYRIMYVKTDGTETNEVEVGRVSTHTLKSLAPLTEYTV
AIFSLYEEGQSEPLTGSFTTKRVPAPQHLEIDESSTDSFRVSWKPTSSDIAFYRLAWIPL
DGGESEEVVINGDADSHVIEGLLPDTEYEVSLLAVFDDESESEVVAILGATSASATTVPT
AVTTTSVSTSEPTTAVFRTGVRNLVIDDETTSSLRVTWDISDYSVQQFRVTYLTAEGDRA
EEAVRMVMVPGRQNTLVLHPLLSDTEYKVTITPIYSDGEGVSVSAPGKTLPLSAPRNLRV
SDEWYNRLRISWDAPPSATMGYRVVYKPVNTPGPALETFVGDDINTILILNLFSGTEYSV
KVFASYSTGFSDALTGVAKTLFLGVTNLDSYQVRMTSLCAQWQLHRHATSYRVVIESLVD
GKKREVNLGGGTPRHCFFELMPGTKYKISVHTQLQELEGPAVSIMETTLPFPTQPPTTPS
TPPPPPTIPPAKEVCKAAKADLAFLVDGSWSIGDDNFNKIINFLYSTVGALDKIGPEGTQ
VAIIQYSDDPRTEFKLNAYKTKETLLEAIQQIAYKGGNTKTGRAIKHAREILFTGEAGMR
RGIPKVLVVITDGRSQDDVNKVSREMQLDGFSFFAIGVADADYSELVNIGSKPSERHVFF
VDDFDAFTKIEDELITFVCETASATCPLVVKDGNNFAGFKMMEMFGLVEKEFSAVEGVSM
EPGTFNVFPCYRLHKDALVSQPTKYLHPEGLPSDYTITFLFRILPDTPQEPFALWEILNE
AYEPLVGVILDNGGKTLTFFNYDYKGDFQTVTFEGPEIRKIFYGSFHKLHVVISKTTAKI
IIDCKQVGEKTINAAGNISSDGIEVLGRMVRSRGPRDNSAPLQLQMFDIICATSWANRDK
CCELPGLRDEENCPALPHACSCSEANKGPLGPPGPPGGPGVRGAKGHRGDPGPKGPDGPR
GEIGVPGPQGPPGPQGPSGLSIQGLPGPPGEKGEKGDLGFPGLQGVPGASGSPGRDGAQG
QRGFPGKDGPTGPQGPPGPMGIPGAPGVPGVTGSQGPQGDIGAPGPPGAKGERGERGDLQ
SQAMVRAVARQVCEQLIQGHMARYNSILNQIPSQSVSTRTIAGPPGEPGRPGAPGPQGEQ
GSPGMQGFPGSPGQPGRPGERGLPGEKGEKGNPGVGTQGPRGPPGSTGPPGESRTGSPGP
PGSPGPRGPAGHTGSPGSQGPAGPPGYCDPSSCAGYGMGGGYGEPTDQDIPVVQLPHNSY
QIYDPEDLYDGEQQPYVVHGSYPLPYSQSYPSPHLAQPEFTPVQEEMEAVELRSPGISRF
ARRIAKRSAQSPVRTKDGKSPSQ
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atgctttgtcgatatgagatacagagctgttttctcttggcttttctagctgtcacagct
tttttcatcagtgatgtccagggccaagtgtccccaccaacaagactaagatataatgta
gtgagtcctgacagtgtacagatctcttggaaagcccccaaggggcaattcactggatat
aaacttcttgtcactccaagttcaggtggaaaaacgaatcaattaattcttcaaaatact
gcaaccaaagcaattattcaaggtctcattccagatcaaaattatgcccttcagatcatt
gcattcagtgaagacaaggagagtaagccagcacaaggccagttcagaattaaagatata
gagagaagaaaagacacaagtaaatccaaggtgaaggatccagaaaaaacaaatgcgagt
aaaccagctccagaaggcagcctgtttacctgtaaaactccagcaattgcagatattgtg
atactagtagatggttcttggagtattggcagattcaatttcaggctcgttcgactgttc
ctggaaaatctggtttctgctttcaatgtgggatctgagaaaacaagagtaggtcttgca
cagtacagtggtgatccccgaattgagtggcacttgaatgcctatggcacaaaggatgct
gttttggatgcagtccgtaatctgccgtataagggagggaatacgttaacaggtcttgcc
ttaacttacattttggaaaacagctttaagcctgaggcaggcgcaagacctggagtatct
aaaattgggatactgatcactgatgggaagtcccaagatgatgttatccctcccgctaaa
aacctacgagacgctggcattgagctgtttgctattggtgtaaagaatgcagatataaat
gaactcaaagagattgcctctgagcctgacagcacacatgtctacaatgtggctgacttt
aacttcatgcataccattgttgaaggtcttaccagaacagtgtgctcacgagtagaggaa
caggaaaaggaaatcaaaggaacgattgcttctcttgggactccttcagatttggtcacg
tctgatgtaacagctagaggcttccgggttagctggacccatgcacctggcaaagtggaa
aaatacagggttgtgtactaccccactcgaggaggacagccagaagaggttgtggtggat
ggaagtgtatcaacagcagttctgaaaaacctgatgtctttaactgagtaccagatagct
gtatttgcaatctactccaatgctgcgagtgagggcctccggggaacggaaaccacactt
gccttgccaatggcgtcggatctgcagttgtacgatgtgtcccagagcagcatgagggtg
aggtggaatggagtcgtgggtgccacaggttacatgatcctgtatgctcccctcacagaa
ggattggcagcagatgagaaggagataaaaattggggagacctcaacagatctcgaactg
gatggactgttgccaaatacagaatatacagtcacagtttatgccatgtttggagaagaa
gctagtgatcccctcacaggacaagaaactacattgcctctaagtccaccagcaaacttg
aaattttttgatgttgggcacaatagtgctaagctaacatgggatcctgcttccaaaaat
gtaaatggctatcgcatcatgtacgttaaaacagacggaacagaaaccaatgaggttgaa
gttggtcgtgtttcaacccatactctgaaaagtttggcaccccttacagagtatactgtt
gctattttctccctgtatgaggagggacaatctgaaccccttactggcagctttaccaca
aaaagagttccagctccccagcatttggaaattgatgaatcatcaacagatagtttcagg
gtcagctggaagcccacctcatcagatattgctttttacagattggcatggattcctttg
gatgggggagaatctgaggaggttgtcataaatggagatgcagacagtcatgttatagag
ggtctgttgcccgacacagaatatgaagtttctctgctggcagtttttgatgatgaaagt
gaaagcgaagttgttgctattcttggagctacatctgcaagtgctaccacggtacctact
gcggtgactaccaccagtgtctcaacctccgagcccaccacagcagtttttcgaacagga
gtcagaaaccttgtcatagatgatgaaacaacctcaagtctgagggtgacgtgggacatt
tcagactacagcgttcagcagttcagagtgacttatctcactgcagaaggtgaccgtgct
gaggaagcggtaagaatggtaatggtgcccggcagacaaaacactcttgtacttcaccct
ctgctgtctgatacagaatacaaagttacaataacccccatctattctgatggggaagga
gtcagtgtctcagctcctggaaaaacattgcccctgtctgctcctaggaacttacgtgtc
tcagatgagtggtacaacagattacgtatcagctgggatgccccaccatcagcaacgatg
ggttacagggttgtctacaaacctgtcaacactcctggtcctgcattggagacctttgta
ggagatgatattaataccattctcattctaaatctcttcagtggaacagagtacagtgtt
aaagtatttgcttcatactcaacaggcttcagtgatgccctaacaggcgtggccaaaacc
ttgtttctgggtgtgacaaacctggattcctaccaagtccgcatgactagtctgtgtgct
cagtggcagcttcacagacatgctacttcatacagggtagttatagagtcacttgtggat
gggaaaaagcgagaagtaaatcttggtggagggacgcctagacattgtttctttgagttg
atgcctggaaccaaatataaaatcagtgttcatacacagcttcaggagcttgagggacct
gctgtgagcatcatggagacaacgttaccatttcctactcagccaccaacaacgccttca
acaccacctccaccacctacaatcccacctgcaaaagaggtgtgcaaagcagccaaagct
gatctggcattcctggtggatgggtcgtggagtattggagatgacaatttcaataagata
attaactttctctatagcactgtgggagctttggataagattggtcctgagggaacacag
gtggcaataattcagtacagtgatgatcccaggacagaatttaaattgaatgcatacaaa
acaaaagaaactcttcttgaagctattcagcaaatagcctacaaaggaggaaacacaaaa
acaggaagagccattaaacatgcacgagaaatcttgtttacaggggaggcaggcatgaga
aggggcattccaaaggttttggttgtcattactgatggacgatcacaggatgatgtgaac
aaagtctccagagaaatgcaactagatggttttagcttttttgctattggagtggctgat
gctgactattcagagttagttaatattggcagcaagcccagtgaaagacatgtcttcttt
gtggatgactttgatgcctttacaaagattgaagatgagctgatcacttttgtttgtgaa
actgcatcagcaacctgcccactggtagttaaagatggcaataattttgcaggatttaaa
atgatggaaatgtttggtttggttgaaaaggagttttcagctgtggaaggggtttccatg
gaacctggtacatttaatgttttcccatgttatagactgcacaaggatgctctggtgtcc
cagcctaccaagtatttgcaccctgaaggtctcccttctgactacaccatcacgtttctc
tttcggatactccctgacacacctcaggagccatttgctctttgggagattttaaatgaa
gcatatgaaccactggttggagttattttagataatggtggtaaaactctgactttcttt
aactatgactacaaaggagattttcaaactgtgacttttgaaggccctgaaataaggaag
atattttatgggagttttcataagttgcatgttgttatcagcaagaccacggccaagata
attattgactgcaagcaagtgggcgagaagaccattaatgcagcggggaatattagttct
gatggcatagaagtgctggggaggatggtgagatccagaggaccaagagacaattctgca
ccactgcagttacagatgtttgacattatttgtgctacctcatgggccaatcgagacaaa
tgctgtgaacttcctggcttgagagatgaggaaaattgccctgcccttcctcatgcttgt
tcctgttcagaagccaataagggtccccttggacctcctggaccaccgggtggtccaggt
gtcagaggtgccaaaggtcatcgtggtgatccaggtccaaagggaccagatggacctcga
ggtgaaattggtgttcctggacctcaaggacccccaggaccacaaggacccagtggactt
tctattcaagggcttccagggccaccaggtgaaaagggagagaagggagatcttggtttt
cctggcctgcagggtgtcccaggagcatcaggttcaccaggaagagatggagctcaaggt
caaaggggctttcctggcaaggatggacccacaggcccacaaggacctcctggcccaatg
ggcatacctggtgctccaggtgttccaggtgttactggaagtcaggggccacaaggtgat
attggagctcctggtcctcctggagctaagggtgaaaggggtgaacggggcgatctccag
tcccaggcaatggttcgggctgttgctcgtcaagtgtgtgaacagctcatccaaggtcat
atggcaagatataactcaattctgaaccagattccaagccagtctgtctcaacacgaacc
atcgcgggacctcctggtgagccaggtcggccaggggctccagggccacagggtgagcaa
ggatcaccaggcatgcaagggtttccaggaagccctggtcagccaggaagaccaggagaa
agaggtttaccaggtgagaaaggagaaaaaggcaatccaggtgttggaacacaaggaccc
cgaggcccaccaggatccacaggacctcccggagaaagtcgaacaggcagcccgggacca
ccgggatctccgggcccacgaggtcctgccggtcacacaggatccccaggctcacagggt
cctgctgggcctccagggtactgtgacccgtcctcttgcgctgggtacggcatgggaggt
ggatacggtgagccaactgatcaagacatcccagtagtgcagttgccacataactcctac
caaatctatgaccctgaggacctttatgatggtgagcaacagccgtacgtagttcacggg
tcctaccccttaccatactcccagtcctatccatcacctcatcttgctcaaccagagttt
actcctgttcaagaagagatggaagccgttgagctgagatccccaggaatcagtcgcttc
gcaaggaggatcgccaaaaggagcgcccagagtccagtacgcacaaaggatggaaaaagc
ccctctcagtga
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integrated database retrieval system
