Corvus cornix (hooded crow): 104692744
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Entry
104692744 CDS
T03546
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X2
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104692744 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104692744 (RAD54B)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104692744 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
TusA
DUF4771
WxLIP_HBD
AAA_34
Nodulin_C
Motif
Other DBs
NCBI-GeneID:
104692744
NCBI-ProteinID:
XP_019144832
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All DBs
Position
2:complement(130413508..130480133)
Genome browser
AA seq
936 aa
AA seq
DB search
MRKWRIKTVIVLAVQLNMRRSAAPSQVLGNAGKKPRFIPPGKCIPVCLKNETKEMDQEMK
LKEIDEKEGDASLLSKINVQNQNENFTQSLESTGKVKTKACFSVDKCSKAEMKMLNVPKA
DALYLPTSGTAKEEAAQEAPDCLVKYFSVVWCKASKKKHKKWEGDAILMIKGKSVILKDM
EGKDIGRGTGYKAKELESLDEGQTLVVGGKEIEVMGVISADDFSSGRCFQAGIGTHDTVP
AALSETITKPFCKPFKNVCQPSTKENMLKDSQSCKPRHDPNASNSLVMPRPNSSHQWMFN
KAGLPVVDVVVDPYIANNLRQHQKEGIIFLYECVMGMRVSGRFGAILADEMGLGKTLQCI
ALVWTLLRQGPYGCKPVLKRALVVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKVEEF
IGSPLYSVMIISYEMLLRSLDQIQAVEFNLLICDEGHRLKNSTIKTTTALTSLSCERRII
LTGTPIQNDLQEFYALIEFVNPGILGSLSTYRKIYEEPIVRSREPSATEEEKELGVKRAA
ELTRLTRLFILRRTQEVINKFLPPKKESIIFCRPTALQLELYRKLLSSHVITSCLQGRLE
NSPHLMCIGALKKLCNHPCLLFKAIKEKSHDPMSEDYDESSLYEGVTDVFPQGYTLDTFS
ETDSGKLQVLVKLLAAIHELNSSERVVLVSNYTQTLNVLQDVCKRYGYSYTRLDGHTPVS
QRQHIVDTFNSKFSPAFIFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRD
GQKHTVHIYRLLTTGSIEEKIYQRQISKQDLSGAVVDLSKTSEHTHFSIEELKNLFTLHE
DSSCVTHDLLECDCMGKIDHQNTSSEEPPISRSCQLEQNHGKPSSKKPLSMSQLMQWKHF
SGQHQTLADPFLERIKENVSFIFQNVTNSTSPPNKT
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaatggagaattaaaactgtaattgtactagcagtacagttaaatatgaggcga
tctgcagctccaagtcaagtcctaggaaatgcaggcaaaaagccaaggtttataccacca
gggaagtgtattcctgtttgtctcaagaatgaaactaaggagatggaccaagaaatgaag
ttaaaggagatagatgagaaagagggagatgcttcattgctttctaaaataaacgtccag
aatcaaaatgaaaattttacacagtctttggaatcaactggaaaagtaaagacaaaagca
tgtttcagtgttgacaagtgtagcaaggcagaaatgaaaatgctaaatgtgcccaaagct
gatgcactgtatttgccaacatcagggacagcaaaggaagaagcagctcaggaagcacct
gactgccttgtgaaatatttcagtgtcgtgtggtgtaaggcatcaaagaaaaagcacaag
aagtgggaaggcgatgctattcttatgataaaaggaaagtcagtaatattgaaagatatg
gaaggcaaagacattggcagaggtactggatataaagctaaagagctagaaagtctcgat
gaaggtcaaacactggtggttggtggaaaagaaattgaagtgatgggtgtaatttcagca
gatgatttcagcagtggcaggtgttttcaggctggaatagggactcatgacacagttcca
gctgcattatctgaaactattacaaaaccattctgtaaaccattcaaaaatgtctgtcaa
cccagtactaaagagaatatgctcaaagattctcaaagctgcaaacctcgccatgatcca
aatgcttcaaattctctagttatgccacgaccaaattcaagtcatcagtggatgttcaat
aaggctggtttacctgtggtggatgtagttgtagatccttacattgcaaataatctccgc
caacatcagaaagaaggaattatatttctatatgaatgtgtaatgggaatgagagttagt
ggcagatttggagctattcttgctgatgagatgggcttaggaaaaacactgcaatgcatt
gcacttgtctggactcttcttcgtcaagggccctatggatgcaaacctgtgctaaagcga
gcactggtggtcacccctgggagtctggtgaaaaactggaaaaaggaatttcagaaatgg
ttgggaagtgaaaggatcaaagtctttacagttgatcaggaccacaaagtagaagaattc
atcggttctccactttattcagttatgataatcagttacgagatgctgctgcgatctttg
gatcaaattcaggctgtagaatttaacctcctaatctgtgacgaaggacatcgtctgaaa
aatagcactattaagacaactacagcccttactagtctgtcttgtgagaggagaattatc
cttaccggtactccgatccaaaatgacttgcaagaattttatgcgttaatagagtttgtg
aatccaggaatactcggttctctatccacgtatagaaagatatatgaggaaccaattgtc
agatctagagaaccttcagcaacagaggaggaaaaggaattaggagtaaaaagagcagca
gaactcacacgcctcactagactctttattctaagaagaacacaggaggttataaacaaa
tttctgccccccaaaaaggagagcataatcttctgccgaccaacagcgctgcaacttgaa
ttgtatcgaaaactgcttagttctcatgttattacatcctgtctacaaggcagactagaa
aatagtcctcacctaatgtgtataggtgctttgaaaaaactttgcaatcatccatgtctt
ctctttaaagctataaaggaaaaaagccatgatcctatgtctgaggactatgatgagtcc
agcctctatgaaggtgtaacagatgtcttcccacaaggttacactttggacactttctct
gaaactgattcaggaaaattgcaggtgctggtgaagttgttagcagcaatccatgagctc
aactcttctgaaagagtcgtgttggtatccaattacactcagacattaaacgtattacaa
gacgtatgcaaacgttatggatactcctatactagacttgatggacatactcctgtctcc
cagagacaacatattgtcgatacttttaacagtaaattcagcccagcttttatctttttg
ctgagttcaaaggctggtggagtaggactgaacctggttggagcatctcatttgatcctg
tatgatatcgattggaatccagctacagatattcaggcaatggctagagtgtggagagat
ggtcagaaacatactgttcatatctacaggctgctaaccacaggctcaatagaagaaaag
atttatcaaagacagatcagcaaacaagacctttctggggcagttgtagacctttccaag
acatctgaacacacacatttttctattgaggagcttaaaaatctctttactcttcatgaa
gattccagctgtgttactcatgacttgcttgagtgcgactgtatgggaaagattgaccat
caaaatacttcctcagaagagcctcccatatctagaagctgccagcttgaacaaaaccat
gggaagcctagttcaaagaaaccactttccatgtcacagttgatgcagtggaagcatttc
tctgggcaacatcagactcttgctgatcctttccttgaaaggataaaagagaatgtttct
ttcattttccagaatgtaaccaattctacttccccacctaataaaacttaa
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