Corvus cornix (hooded crow): 104692919
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Entry
104692919 CDS
T03546
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccw04040
]
104692919 (TRPA1)
Ion channels [BR:
ccw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104692919 (TRPA1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104692919
NCBI-ProteinID:
XP_019144580
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All DBs
Position
2:complement(121462305..121499732)
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AA seq
1126 aa
AA seq
DB search
MKRSLLRLCRAREKAAVSSSYQGVVCEADAASVASQDVFKVISDGSACRLRSFIKKNRSG
LTKVDELNATPLHHAAEGGQIELMQLIIDDSSCEVLNVMDSSGNTPLHWATKKNQIESVR
LLLSRGANPNILNSNMMAPLHMAVQSLHNEIVKILVQHSSTDVNLEGEAGNTPIIVACYK
DNPEALTLLIENGGKICKPNKTGCMPIHAAAFSGAKTCLEILLKKGEELGHSAKTHINFT
NNGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSY
AGEESIIDAVDGNKETLLHRTALFDHYELAEYLISMGANIDSVDIEGRSPLLLATSCASW
KIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGGLQHLNEKYLQMEHIKNLVVDEDNEGCT
PLHYACRQGVALSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLL
NEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILD
TNVKCTDRVDEEGNTALHLAAREGHAKAVRLLLDYGAKILFNKAVASFFHEAIHNRRKDV
VSAVILHKRWEEAVVTFSHYSSANKCPLLEMVEYLPDSFKLVLDNCIIESSEEKTSRDFY
IEYNFRYLQCPLTLNRKVKDGEDIFYEPLTTLNAMVRHNRMELLSHPVCKEYLLMKWMAY
GFRAHLMNLGIYSLGLIPLTLLVTHIQPIRPQNGTELYEARPLEYEDSYFTRVCMCLVLI
MSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYTTSIIFVSSLFINTPAHLQWECGAIAV
YLSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYS
TPLLSVMKTFAMMLGDINYHDAFLDPLLSNELPYPFLSYTVLIIFTLLIPILLMNLLIGL
AVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYCGFMSVF
QYCFGCEDSTTYAQSPDTTLELEVLKQKYRLKDISTLLEKQHDLIKLIIQKMEIVSEAED
EDSNDLFQHKFRKRQLEHKNSKWDTVLKAVKTSVPNPSTEKNNSFF
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctctctgctgcggctgtgccgggcgcgggagaaggcggccgtctccagctcc
taccagggcgtcgtgtgcgaggcggatgccgcctccgttgcctcgcaggatgtcttcaag
gttatttcagatggaagtgcctgtaggctacggagcttcatcaagaagaatcgttctggg
cttacaaaagtggatgaattaaatgccaccccactgcatcacgctgccgaaggaggacaa
atagaactaatgcagttgatcatagacgattcttcctgcgaagtattaaatgtgatggat
tcttctggaaataccccactacattgggccacaaagaaaaaccagattgaaagcgttcgc
ttgcttctcagcagaggagcgaatccaaatattctcaactccaatatgatggcacctttg
catatggctgttcagtccctgcacaatgaaattgtcaagattttagtccaacatagcagt
acagatgttaacttggaaggtgaagcagggaacacacctataattgtagcatgttacaag
gacaatcctgaagcattgacactcctgattgaaaacggagggaaaatatgtaaaccaaac
aaaacgggatgtatgcctatccatgcagcggcattttcaggtgcaaaaacatgtctggaa
attcttttgaaaaaaggtgaagaattgggtcactctgctaaaacccacatcaattttacc
aataatggaaagtgcagtccacttcatttggcagttcagagtggtgacctcgaaatgatt
aaaatgtgcattgaatttggagcccaaattgatctaaaacagaatgaaaaatgcacagca
cttcattttgctgccactcaaggagcaactgagattgtaaagctaatgatgtcatcctat
gctggtgaggaatccattattgatgctgtagatgggaataaggaaacattgcttcacaga
acagcgttgtttgatcattatgaactggcggagtatttgatttcaatgggggctaatatt
gatagcgttgacatagaaggtcgatccccacttctgctggccacttcctgtgcatcatgg
aaaattgtcaatttactgctctcaaaaggagcaaatgtatcattaaaagatcatcttggt
cggaatttcttgcatttgaccgtgttgcagcctggaggattacagcatctgaatgagaaa
tacctgcagatggaacatattaaaaatctcgtagtggatgaagataatgaaggatgcact
ccattgcattatgcatgcagacaaggagtggccctctctgtaaataatttactcagcctc
aacgtttccatctactctaagagcagggataagaagtcgccattacactttgctgccagc
tatgggcgcatcaatacttgtcaacgacttataagagatatgaaagacacaagacttttg
aatgaaggtgataagaagggaatgactccccttcatttggcagcccagaatggtcatgag
aaggtagttcagtttcttctgaagagaggggctcttttcctctgtgattataaaggctgg
acagccctgcaccatgctgcctttggaggatacactcgcacaatgcagatcattttggat
actaatgtgaagtgtactgacagagtggatgaagaagggaacacagctctgcacttggct
gcacgagaaggtcatgcaaaagcagtgaggttacttcttgactatggtgcaaaaattctc
ttcaacaaagcagtagcttcttttttccatgaagcaatacacaataggagaaaagatgta
gtgtctgctgtcattttgcacaaaagatgggaagaagctgttgtgactttctctcactat
tccagtgccaataagtgtcctttgctggaaatggttgagtatcttcctgattcatttaaa
ctggtgttggacaactgcataatcgagtcttcagaggaaaagacaagtcgagacttctac
attgaatataacttccgatatcttcagtgtcccttgacacttaacaggaaagtaaaggat
ggtgaagatattttctatgaaccacttaccactttaaacgccatggtgcgccacaatcgc
atggagctactcagtcatcctgtgtgtaaagaatacttgcttatgaaatggatggcctat
gggtttcgagcacatctaatgaatttaggcatatattctcttggtctcatcccactgact
cttctggtcactcacatacaaccaataagacctcagaatggaacagagctctatgaagca
agaccattagaatatgaggactcatacttcaccagggtgtgtatgtgtttagttttaatt
atgagtttactgggcatctgcaaagaaatatttcagctaattcagcagaaactgaaatat
ttgttggattactccaatctactggactggaccatatatactacaagcataatttttgtg
tcttctttatttattaatacaccagctcatttgcagtgggaatgtggagcaattgctgta
tacttgtcttggatgaacttcttgctttatcttcaacgatttgagaactatggaatctat
gttgtgatgttctgggaaattttgaggactttgattcggattgctgtggttttctttttc
ctgatactggcctttgggctgagtttctttgtccttttgggttcacagcaaacatacagc
acacctctgctttccgtaatgaagacattcgcaatgatgctgggagacataaattaccat
gatgcattccttgatcctttactaagcaatgaattgccatatccattccttagttacacg
gttctcattatatttaccttgctaattccaatccttcttatgaacttgctaattggtttg
gctgttggggatatcgctgaagtgcagaaatatgctgcactcaaaaggattgcaatgcag
gttaatcttcacaccaacttagagaagaagctgccattttggttcttaagtcgggtggac
caggaatcaatcactgtatatcccaacaggccgagatactgtggatttatgagcgtgttc
caatattgctttgggtgtgaggactctaccacatatgcgcagagccctgatacaacacta
gaattggaagttctgaagcagaaatacaggctcaaagatatatcaacattgttggaaaag
cagcatgacctcattaaactgattatccaaaaaatggagatagtgtcagaggctgaagat
gaagacagcaatgatctatttcagcacaaatttaggaaaaggcagttagagcacaagaat
agtaaatgggatacagtgttaaaagctgttaaaacaagtgtgcctaacccaagcacagaa
aagaacaatagcttcttctag
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