Corvus cornix (hooded crow): 104692923
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Entry
104692923 CDS
T03546
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccw01002
]
104692923 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104692923 (VCPIP1)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104692923 (VCPIP1)
Peptidases and inhibitors [BR:
ccw01002
]
Cysteine peptidases
Family C64
104692923 (VCPIP1)
Ubiquitin system [BR:
ccw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
104692923 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
104692923
NCBI-ProteinID:
XP_010403520
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All DBs
Position
2:complement(119298913..119315480)
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AA seq
1215 aa
AA seq
DB search
MSQPQQPPPPSPQQQPQPPPPSASKKRDRRIFSGTCPDPKCQARLFFPAHGPQGSGSIEC
TDCGRRHEQRQLLAVEEVTDPDLVLHNLLRNALLGVSGAGPPRRNTELVKVNGLSNYHCK
LLAPILARYGMDKQTGKAKLLTEMNQGDIFDCSLLGDRAFLIEPEHVETMGYGKDRSGSL
IYLHDTLEDIKKANNSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRENLKKHFEE
NLSHYKALFHDFIDAAEWEDIINECDPLFVPPEGVPMGLRNIHIFGLANVLHRPIILLDS
LSGMRSSGDYSATFLPGLIPLEKCMGKDGMLNKPICIAWSSSGRNHYIPLVGIKGAALPK
LPRKLLPKAWGVPQDLIKKYIMLEEDGGCIIGGDRSLQDKYLMRLVAAMEEVFMSKHGIH
PSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHRCLICGALSEHHVPPEWLAPG
GKLYNLAKSTHGQLRPDKNYSFPLNSLVCSYNPVKDVLVPDYGLSNLTVCNWCHGNLMRR
VREDGSVLYIDGDRTNTRSTGGKCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVY
WFQYESDTSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPDDYTPVNI
DGAHAQRADDVQQGQELESQLPTKIILTGQKAKTLHKEELNMSKAERTIQQNIVDQASVM
QKRKSEKLKQEHKGQPRTASPGAVREGPSSAPATPTKTPYSPTSAKEKKIRITTNDGRQS
MLTLKCTTTFLELQEGIAREFNIPPYLQCIRYGFPPKELLPPKEGMENEPVPLQHGDRIA
IEILKGKEEGRQAASAHSAHAVKHEDVAVTSKISSKDLQEQVDKEMYSLCLLATLMGEDV
WSYAKGLPQLFQQGGVFYSIMKKTTGLADGKHCTFPHLPGKNFVYNAAEDRLELCVDAAG
HFPIGPDVEELVKEALSQVRAEATSRSREASPSHGMLKLGSGGVVKKKSEQLHNITAFQG
KGHSLGTASSSQQHDQRARETPLLRKHSTETDFSPSAKIEPSVFTAASGNSELIRIAPGV
VTMRDSRQLDPTLIEAQRKKLQEMVSSIQASMDRHLRDQNTEQSASVDVSQRKVEAVSST
AKTGSFQAALPESFSAPGGTELLNTESTDGNMVNSVGTTFPARSKAQKGNSVEELEEMDS
QDAGITNATEPMDHS
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccccagcagccgccgccgccgtcccctcagcagcagccgcagccgccgcct
ccgtccgcctccaagaagcgagaccggcgcatcttctcgggcacctgccccgatcccaaa
tgccaggcgcggctgttcttcccggcgcacgggccgcagggcagcggcagcatcgagtgc
acggactgcgggcggcgccacgagcagcggcagctgctggccgtggaggaggtgacggac
cccgacctggtgctgcacaacctgctgcggaatgcgctgctgggcgtcagcggcgccggc
ccgccccgcaggaacactgagctcgtcaaagtcaatggcctctccaactaccactgcaag
ctcctggcccccatcctggcccgctatgggatggacaagcagactggcaaagccaagctc
ctcacggagatgaaccagggagacatatttgactgctccctcctgggcgaccgcgccttc
ctcatcgagccagagcacgtcgaaaccatgggttatgggaaggaccgctccggcagcctc
atatacctgcacgacaccctggaggacatcaagaaggccaacaacagtcaagagtgcctc
attcctgtccacgtggatggagatggccactgccttgtccatgcagtctcacgagccctt
gttggcagggaactgttctggcatgctctcagagagaatctcaagaagcattttgaggag
aatctaagccactacaaggcgcttttccatgacttcattgatgctgcagagtgggaggat
attatcaatgaatgtgaccctttgtttgttccaccagaaggtgtgccaatgggccttaga
aatattcacatctttggtcttgccaatgtgcttcaccggcctatcatcctgttagactcc
ttgagcggaatgcgaagctctggagattattcagcaacgttcctccctggtctgatacct
ctggaaaaatgcatgggaaaagatggcatgttgaacaagccgatctgcattgcgtggagt
agctcaggacgtaaccattatattcctcttgttggaataaaaggtgctgctttacctaag
ctgcctagaaagctacttcctaaagcctggggagttcctcaagacctcatcaaaaagtat
atcatgttagaggaggatggtggttgtattattggaggagacagaagtttacaggataag
tacttgatgaggcttgttgctgcgatggaggaggttttcatgagtaaacacggtatccac
cccagtcttgtagctgatgtgcatcaatatttctacagaaggactggtgtaataggggtc
cagcccgaagaggtcactgcagctgccaaaaaagcagtgatggacaaccgccttcacagg
tgcctcatctgtggggctctttcagagcatcacgttccaccagagtggctggctcctggg
gggaagctgtataacctggcaaaaagtacccacggccagctaaggcctgacaaaaattac
agctttcccctgaacagtttggtgtgttcttacaaccctgtgaaggatgtgctggtacca
gactatggcctgagtaatttgactgtttgtaactggtgccacggtaacttaatgcgtcgt
gtcagagaagatgggtctgttttgtatattgatggagacagaactaatactaggtctaca
ggtggcaaatgtggctgtggattcaagcactactgggaaggtaaagaatatgacaatctg
cctgaagcttttcctataactctagagtggggtggaagagtggtgagagagactgtctac
tggttccagtacgaaagtgacacctctttgaacagcaatgtgtatgatgtcgccatgaaa
cttgttaccaagcacttccctggtgaatttggtagtgagattcttgttcagaaagttgtc
aacacaatactgcatcaaactgccaaaaagaaccctgatgattatacccctgtaaatatc
gatggtgctcatgctcaaagagctgatgatgtacagcaaggacaagagttagagtcacaa
cttccaaccaaaataattttgactggacagaaggctaaaactttgcacaaggaggagttg
aatatgagcaaagctgaaagaactattcagcagaacattgtggaccaggcttccgtaatg
cagaaacggaaaagtgaaaaattgaaacaagagcataaagggcaacccaggactgcttct
cctggggctgttcgtgaggggccctcgtccgcacctgctacaccaaccaaaaccccgtat
tctccaacatccgcaaaagaaaagaaaattcgaataaccaccaatgatgggaggcagtca
atgcttaccttgaagtgcactaccaccttcttggagctccaggaaggcatagcgagagaa
tttaatattcccccgtatttgcaatgtattcgctacggctttcctccgaaagagcttctg
cctcccaaagaaggcatggagaatgagcccgttcctttgcagcacggtgacaggattgcc
atagaaatcctgaagggcaaggaggaaggcaggcaggctgcctcagcgcactcagctcat
gctgtgaagcacgaagatgttgctgtgaccagtaagatctcatcgaaggatctgcaagag
caagtcgacaaggagatgtattcgctctgtcttctggcaacgctcatgggagaagatgtt
tggtcttacgcgaaggggcttcctcagttgtttcagcagggtggagtattctacagcata
atgaagaaaacaacaggtttggctgatggcaagcactgcactttcccacatctgcctggt
aaaaactttgtgtacaatgcagcagaagacagattagagctgtgtgtggatgctgctggg
cacttcccgatcggtcctgatgttgaagagctggttaaagaggccttaagtcaagtgcga
gcagaagctacttcaagaagcagggaagcaagtccttcacatggaatgctgaagctgggt
agtggtggagtagtgaaaaagaaatctgaacaactacataacataactgcatttcaagga
aagggtcattccctaggaactgcatctagtagtcaacaacacgatcaaagagccagggaa
acaccacttttaagaaagcatagcacagaaacggacttcagtccttctgctaaaattgag
ccttctgtattcacagctgcttctggtaacagtgagcttattcgaattgctccaggagtt
gtgacaatgagagacagcaggcagcttgaccccactttgattgaggcacagagaaaaaag
ttgcaggaaatggtctcttctattcaggcttcaatggatagacatttgcgggatcagaat
acagagcagtcagcatcagttgatgtatctcaaagaaaagtagaggcagtgagttcaact
gctaaaactgggagctttcaggctgccttacctgaatcattttctgcaccaggtggtact
gaactcttgaatactgaatcaactgatggtaacatggtaaattctgtgggaacaacattc
cctgcaaggtctaaagcacaaaagggaaattccgttgaggagcttgaggagatggatagt
caagatgcaggaatcactaatgcaactgagccaatggatcactcttga
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