Corvus cornix (hooded crow): 104693095
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Entry
104693095 CDS
T03546
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104693095 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccw04147
]
104693095 (COPB2)
Membrane trafficking [BR:
ccw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104693095 (COPB2)
Exosome [BR:
ccw04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104693095 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
104693095
NCBI-ProteinID:
XP_039412887
LinkDB
All DBs
Position
9:19890824..19905537
Genome browser
AA seq
913 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKNFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVAAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRIRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAE
KDGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVAEEYVKQSLADLRPAREYPLVTPNEERNLLEEAK
GFEPSGIMTSQKKAEEPVPSPKQEVMKTVVQNSDSLPARDQKTLLDLEDDLDNLDLEDID
TTDINLDEEILDE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgactcgatatcaagcggaagctaacagcccggtctgaccgggtgaagagc
gtggacctgcatcccacggagccatggatgctggccagcctttacaatggcagtgtttgt
gtttggaaccatgaaacacagactctcgtgaagaattttgaagtgtgtgacctgcccgtg
agagctgccaaattcgtggcgaggaagaactgggttgtcactggagctgatgacatgcag
atcagagtttttaattacaacaccctggaaagagttcacatgtttgaagcccattccgac
tacatccggtgcattgctgtgcaccccacacagcccttcatcctgacaagcagtgatgac
atgctgattaaactctgggactgggataaaaaatggtcttgttctcaggtctttgaagga
cacacccattacgtcatgcagattgtcataaacccaaaagacaacaatcagtttgccagt
gcctctttggataggacaattaaggtgtggcagctcggatcatcatctcccaacttcacc
ttggaaggccacgagaaaggagtcaactgcattgactattacagtggtggggacaagcca
tacctcatttctggggcagatgaccggctggtgaagatctgggactaccagaataaaacc
tgtgtccaaacactggaaggacatgctcagaatgtgtcatgcgtcagcttccatccagag
ctgcccatcatcatcactggctccgaagacggaacggtgcgcatttggcactccagcact
taccgcctggagagcaccctgaactatggcatggagagggtgtggtgtgtggccagcttg
agaggctccaataacgtagctttgggatatgatgaaggcagcattattgttaagcttggt
cgtgaagaacctgccatgtccatggatgcaaatggaaaaattatttgggctaaacattcc
gaagtccaacaggctaacttgaaagctatgggagatgctgaaatcaaagatggagagagg
ttgccactggctgtgaaggatatgggcagctgtgaaatctatcctcagacaattcagcac
aaccctaatggacggttcgttgtggtgtgtggtgatggtgaatacatcatctacacagcc
atggctctgaggaacaagagctttggttctgcacaggagtttgtgtgggcacatgactct
tcagaatatgcaatcagggagagcaacagtgttgtaaagatatttaaaaatttcaaagag
aagaagtcattcaaacctgattttggagcagaaggcatctatggtggctttctgttggga
gtcagatctgttaatggcttggctttctatgattgggagaacacagaactgattcgcaga
attgaaatccagcccaaacatattttctggtctgactcgggtgagcttgtgtgcattgct
acagaagagtccttcttcattctcaaatacctgtcagaaaaagttgcagcagcccaagaa
acacatgaaggtgtcactgaagatggaattgaagatgcctttgaggttcttggtgagatt
caggagattgtgaaaacaggcttgtgggttggtgactgctttatttacaccagttctgtg
aacagactcaactactatgttggaggagagattgtcaccattgcccacttagacagaaca
atgtatctcttggggtatattcctaaggacaacagactgtatttgggcgataaagagcta
aacattgtcagttactctttgctggtctcagtgcttgaatatcaaactgctgtgatgaga
agagatttcggcatggctgacaaagttcttcccacaattccaaaagaacagagaatcaga
gtcgcacattttcttgaaaaacagggcttcaaacaacaagctcttgcagtatctacagat
ccagagcatcgttttgaacttgctcttcaacttggagaattaaaaatagcctatcagctt
gcagtggaagcagagtcagaacagaagtggaagcaacttgcagagcttgccattagtaaa
tgccagtttggcttagcccaggagtgtctgcaccatgcacaagactatggaggactgctg
ctcctggccacagcttcaggaaatgccaacatggtgaacaagttagccgaaggtgcagaa
aaagatggcaagaataatgtggcgtttatgagctacttcctgcagggaaagcttgattca
tgtttggaactcctgattaaaactgggcgtctccctgaagccgcttttcttgcacggacg
tatttgccaagccaagtttcgagggttgttaaactctggcgggagaacctctccaaagtc
aatcaaaaagctgctgagtcccttgctgatcctacagaatatgaaaatcttttccctgga
ttaaaggaagcttttgttgctgaagagtatgtcaagcaaagtcttgctgacttgaggcca
gccagggaatacccccttgtcactccaaatgaagaaagaaacttacttgaagaagcaaaa
ggatttgagccttctggaataatgacatctcagaagaaggctgaagaaccagttccctct
cctaaacaagaagtgatgaagacagttgtgcagaattctgatagccttccagcaagagat
caaaagacactgctggacttggaagatgacttagataacttggatttggaggatattgat
accacagatatcaatctggatgaagagatcttagatgagtga
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