Corvus cornix (hooded crow): 104693114 Help Entry 104693114         CDS       T03546                                  Symbol PCDH9 Name (RefSeq) protocadherin-9 isoform X1   KO K16498   protocadherin delta 1 Organism ccw  Corvus cornix (hooded crow) Pathway ccw03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:ccw00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     104693114 (PCDH9)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:ccw01009]     104693114 (PCDH9)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:ccw04515]     104693114 (PCDH9) Protein phosphatases and associated proteins [BR:ccw01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      104693114 (PCDH9) Cell adhesion molecules [BR:ccw04515]  Cadherins   Protocadherins    104693114 (PCDH9) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 RET_CLD1 Big_9 MAP17 V_ATPase_I RCR EphA2_TM DUF6249 7tm_3 DUF6377 Motif Other DBs NCBI-GeneID:  104693114 NCBI-ProteinID:  XP_010403851 LinkDB All DBs Position 1:complement(63447488..64128137) Genome browser AA seq 1225 aa AA seqDB search MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA SLVYRLVSKAGDAPLVKVSSNTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK RFFALNNTTGLITVQRSLDREETAVHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQALNFGDMP KYLWEIWVPDKPWVSQRRVTFHLPDGSQESCSDSGLGDHEPVGGGTLISHPLPLVQPQDE FYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPSLGPYQ QPKSPLSTFAPQKEWVKKDKLVNGHTLTRTWKEDSNRNQFSDRKQYGSSEGHFNTGNHMT DIPLANLKSYKQAPGAVESPKEHQL NT seq 3678 nt NT seq  +upstreamnt  +downstreamnt atggacctgagagatttttacctgttggctgctttgattgcctgtttaaggctggattct gctatagctcaagaacttatttacactattagagaggagctgcctgaaaacgtacccata gggaacataccaaaggacctgaacatttctcatatcaatgctgccacagggaccagtgcc agccttgtatatagactggtgtctaaagcaggggatgcgcctctggtcaaagtatccagt aacacaggggaaatcttcacaacgtctaaccgaatagacagagaaaaactgtgtgctgga gcttcctatgcagaagaaaacgagtgtttctttgaacttgaagtggtgattctccccaat gacttttttaggctgatcaaaataaaaatcattgtaaaggacactaatgataatgcgcct atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgg tttccaatcccatcagcaacagatcctgacacaggtttcaatggtgtgcagcactatgag ttgttaaatgggcagagtgtctttggactggatattgtagaaactccagaaggggagaaa tggcctcagctgattgtgcagcagaacttggacagagagcaaaaggacacctatgtgatg aaaatcaaagtggaggatggaggtaccccccagaaatccagcacagctatcctgcaagtc acagtaagtgatgtcaatgataacaggccagtgtttaaagagagtcaagtagaggtccat ataccagagaatgcccctgtaggcacctctgtaattcagcttcatgctacagatgctgat ataggaagcaatgcagaaatcagatatatttttggtgcccaagtcgcccctgcaaccaaa agattttttgctttaaacaacaccaccgggctgattacagttcagaggtccttagatcga gaagagactgctgttcacaaagtgacagtgctggctagtgatggtagctctacaccggcc cgggcaactgtcaccatcaatgtcactgatgtaaacgataaccctcccaacatagacctc aggtacataataagccccatcaatggcacagtgtacttatctgagaaagatcccatcaat acaaagattgccctaattacagtttcagataaggacactgatgtgaatggcaaagtgatc tgtttcattgagagagaggtccccttccacttgaaagcagtttatgacaaccagtatttg ttagagacctcctccttgttggactatgagggcaccaaagaattcagctttaaaattgtg gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaagctggag gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa aacaaccggcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa aatgcagacattgtttatcagcttggtcctaatgcctcctttttcgatctggatcgaaag acaggagttttgacagcctccagagtttttgacagagaagagcaggagcgtttcattttc actgttacagcccgagacaacggcacccctcctttgcagagtcaagcggctgtaattgtt actgtgttggatgaaaatgacaacagtcccaaatttactcataatcatttccagtttttc gtatccgagaacttaccaaagtatagcacggtaggggtgatcacagtgactgatgcagat gccggggaaaataaagcagtgaccctttccatcctgaatgacaatgaaaactttgttctg gatccatactctggagttataaagtccaatgtttcttttgatcgagaacagcagagctct tacacctttgatgttaaggcagtggatggagggcaacctcctcgctcttctacagcgaaa gtaaccataaacgtgatggatgttaatgataacagtcccgttgtcatctacccaccttct aacacttcttttaagctagtgccactctcagcaattccaggatcggtggtagctgaagtc tttgctgtggatatagacactggcatgaatgctgagctgaagtacacaatcgtaagcggc aataacaaaggtttgtttcggattgatccagtgacaggtaatatcactctggaggaaaaa ccaactcctaatgatgtggggctgcatcgcttagttgtcaacataagtgatttgggttat cccaaatccctgcatactcttgtgcttgtatttttatatgtaaatgatactgctggaaat gcctcttatatttatgacttgatacgcaggactatggaaacacctttggatcggaacata ggggacagtagccagccctaccaaaacgaggactatctcacaatcatgatcgctattgtg gcaggtgccatggtagtcatagtggtgatatttgtcacagtccttgttcgctgtcgacat gcatccagattcaaagctgcccagaggagcaagcaaggtgctgagtggatgtctcccaat caggaaaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccaaagagctcc cttttgaactttgtgacgattgaggagtccaaacctgatgatgcagttcatgaacctatc aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgattgg ggcacagcaccaccaacaacctttaagcctaacagtcctgatcttgccaagcattacaaa tctgcctctccgcagtctgcttttcatctcaaacctgacactcccgtttcagtgaaaaag caccatgtgattcaggaactcccgttggacaacacctttgttggtggttgtgacaccctt tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga ggcttcaagacaaagggccccttacacaccagacaggcactgaattttggagatatgccg aagtacttgtgggagatttgggtacctgacaaaccatgggtgtcccagcgccgtgttaca tttcacctccctgatggctcccaggaaagctgcagtgacagtggtctgggagaccacgag ccagtgggtggtggaaccctgatctcacaccctctccctctggttcagccgcaggacgaa ttctatgaccaggcttcaccggacaagaggactgaagctgatggcaattctgaccccaac tcggatgggcctcttggtccacgaggattagctgaagctacagagatgtgtactcaagaa tgcctggttttgggtcactcagacaactgttggatgcctcctagcttgggcccataccaa cagccaaagtctcctctctccacctttgcacctcagaaagaatgggttaagaaggacaaa ctagttaatggacacacattgaccaggacctggaaagaagatagcaacagaaaccagttc agtgatcgaaagcagtatggttccagtgagggccatttcaacactggcaaccacatgact gacattcctctggccaacttgaagtcttacaaacaggccccaggagctgtggagagtcca aaggagcaccagctataa

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