Corvus cornix (hooded crow): 104693191
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Entry
104693191 CDS
T03546
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104693191 (CHD1)
03036 Chromosome and associated proteins [BR:
ccw03036
]
104693191 (CHD1)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104693191 (CHD1)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104693191 (CHD1)
SLIK complex
104693191 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
104693191
NCBI-ProteinID:
XP_039422444
LinkDB
All DBs
Position
Z:71530925..71586585
Genome browser
AA seq
1810 aa
AA seq
DB search
MNGHSDEESVRNSSGESSRSDDDSGSASVSGSGSSSGSSSDGSSSQSGSSDSDSGSESGT
QSESESDTSREKKQIQSKPPKVDGSEFWKSSPSILAVQRSAVLKKQQQQQKAASSDSVSE
EDSSSSEDSADDSSSETKKKKHKDEDWQMSGSGSVSGTGSDSESEEEREKSSCEESESDY
EPKNKAKSRKPSSRIKPKSGKKSAGPKKRQLDSSEDDEEEEDDDDYDKRGSRRQATVNIS
YKEAEETKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRVGRKGATGAATTIYAVEADG
DPNVGFEKSKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKR
WLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSEC
SWEDGALIAKKFQARIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPPYIGGHETLEL
RDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLST
LTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKS
FLGSLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIM
PEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL
QKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQ
HLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGE
LRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI
GQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFN
KEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKV
ANFSNMDEDVIELEPERNSRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQIS
FNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKF
GGPLERLDAVARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGQERAGGRLGKVKGPT
FRISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNL
LIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKE
AQRLAGAGNSKRRKTRTKKNKVLKAAKLKEEIKSDSSPQPSEKSDEDDDENNKDEIVSVK
HPHKKFKAEKENEEKPEPDSGIKKEAEEKRETKEKENKRDLKREKKEKEDKKELKEKDIK
EKRENKVKESTQKEKEVKEEKVNEIKSENKEKAKKIPLLDTPVHITASSEPVPISEESEE
LDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNP
EQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVNTHVIRNPD
VERLKENTNHDDSSRDSYSSDRYLSQFHDHHKDRHQGDAYKKSDSRKRPYSAFSNGKDHR
DWDHYKQDSRYYSDSKHRKFDEYRSRDHRSSLEGSLKDSRVHSDHRSHSDHRIHADHRPS
SEYSHHKSPRDYRYHSDWQMDHRASGSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKST
PEHTWSSRKT
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagtgtaagaaacagtagtggagagtcaagccgatca
gatgatgattctgggtcagcatcagtttctggatctggttcaagctccggaagcagtagt
gatggaagcagcagccagtcaggcagcagtgactctgactctggttcagagtcaggcact
cagtcagaatcagagtctgacacatctagagagaagaaacaaattcagtctaaaccacca
aaagttgatggatctgagttttggaagtctagtccaagtatacttgctgtgcaaagatca
gcagtgctcaagaagcagcaacaacaacaaaaggcagcctcatcagacagtgtttcagaa
gaggactcctcaagtagtgaagattcagcagatgactcatccagtgaaaccaagaagaaa
aagcataaagatgaggactggcaaatgtcgggatcagggtcagtatcgggaactggttct
gattctgaatcagaggaagaacgggagaaaagcagctgtgaagagagtgaatctgactat
gagccaaaaaacaaggccaaaagccggaagccttcaagcagaattaagccaaaaagtggg
aaaaagagtgcaggaccaaaaaagaggcaacttgattcatcagaggatgatgaggaggag
gaggatgatgatgattatgataagaggggatctcgtcgccaggcaacagtcaatattagt
tacaaagaagctgaagaaaccaagacagattctgatgatttgctagaagtttgtggagaa
gatgttccacaacctgaagaagatgaatttgaaactatagaaaaatttatggatagtcga
gttggccgtaaaggagccacgggtgctgcaaccacaatctatgcagttgaggcagatggt
gacccaaatgttgggtttgaaaaatcaaaggagccgggagaaatacaatatcttattaaa
tggaaaggttggtcacacatccataacacttgggaaactgaggaaacactgaagcaacaa
aatgttaaaggaatgaagaaactggacaattataagaaaaaggatcaggaaacgaaacga
tggctgaaaaacgcttctccagaagatgtggaatattacaactgccagcaggagcttaca
gatgatctacataaacaatatcagatagtggaaagaataatagctcattcaaatcagaaa
tcagctgctggttatccggactactattgtaagtggcagggtctgccttactctgaatgt
agctgggaagatggagctctcattgccaaaaagtttcaggcacgcattgatgagtacttc
agcagaaatcaatccaagaccactccatttaaagactgcaaggttctaaaacaaaggcca
cggtttgttgcactaaagaagcaaccaccttacattggaggacacgaaactctagaatta
agagattatcagttaaatgggttgaactggcttgctcactcatggtgcaagggcaatagc
tgtattcttgcagatgaaatgggtctgggtaaaacaatacaaactatttcttttctgaac
tatctgtttcacgagcatcagttatatgggcctttcttgttggttgtgccactttctaca
ttgacatcttggcaaagggagattcaaacctgggctcctcagatgaatgctgtagtttac
ttaggagacataactagcagaaatatgataagaactcacgaatggatgcatccacagaca
aaacgattgaaatttaacatactcttaacaacatatgaaattttgttaaaagataagtca
ttccttggtagcctgaattgggcattcataggagttgatgaagctcatcgtttaaaaaat
gatgactctcttctgtacaaaactctaatagacttcaagtctaaccatcgtcttcttatt
actggaacccctctgcaaaactccctcaaagagctttggtctttattgcacttcatcatg
ccagaaaagttttcctcatgggaagattttgaggaggagcatggcaaagggagagagtat
ggttatgcaagtcttcacaaagaacttgaaccatttctgctgagaagagttaaaaaagat
gtagaaaagtctttacctgctaaagtggagcaaattctgaggatggaaatgagcgcattg
cagaagcaatactacaagtggattttaaccaggaattataaagcccttagcaaaggttca
aaaggcagtacttcaggctttttgaatatcatgatggaactcaagaagtgttgcaaccat
tgctacctcattaaaccaccagatgataatgaattctataataaacaggaggccttacag
catttaatacgtagcagtgggaaactaatccttcttgacaagctactgattcgtctgcga
gaacgtggcaacagagtcctgattttctcacagatggtaaggatgctggacatcctggca
gaatatctgaaatatcgtcaattcccatttcagagacttgatggatcaataaaaggggaa
ttgaggaaacaagcactggatcattttaatgcagaaggatcagaggacttctgcttttta
ctgtctaccagagctggaggattaggtatcaacttggcatctgctgatactgtggttata
tttgattctgactggaatccacagaacgatctgcaagcacaggctagagcacatagaatt
gggcagaagaagcaggttaatatttatcgactagtcacaaaaggatcagtagaagaagat
attcttgaacgagccaagaaaaagatggtgttagatcatttagtaatccagagaatggac
actacagggaaaactgtgttacatacaggctctactccttcaagctcaacaccttttaat
aaggaggagttgtcagcaattttaaagtttggtgctgaggaactttttaaagaacctgaa
ggggaagagcaggagcctcaagaaatggatatagatgaaattttgaagagggctgaaacg
cgggaaaatgagccaggtccattaactgtaggagatgagttactttcacagttcaaggtg
gccaacttctccaatatggatgaagatgttattgagttggaaccagaaagaaattcaaga
aattgggaagaaatcattccggaggtccagaggcgaagaatagaagaggaggaaagacaa
aaagagcttgaagaaatatacatgcttccaaggatgagaaactgtgcaaaacagatcagc
ttcaatggcagcgaagggaggcgcagtagaagcagaaggtactctggatctgacagtgac
tccatctcagagagaaaaaggccaaaaaaacgtggaagaccacgaactattcctcgagaa
aatattaaaggatttagtgatgcagagattaggcggtttatcaagagttacaagaaattt
ggtggccctcttgagaggctagatgctgtagctagagatgctgagctagttgataaatca
gagacagatctcagacgtttgggagagcttgtacataatggatgcattaaagccttaaag
gacaattcatctggacaagagagagcaggaggtagacttgggaaggttaaaggcccaaca
ttccgaatctcaggagtgcaagtaaatgcaaagttagtcatctctcatgaggaagagttg
gcaccactgcacaaatccattccttcagatccagaagaaagaaaaagatatgtcatccca
tgccacaccaaggctgctcattttgatatagattggggtaaggaagatgattccaatttg
ttaataggcatctatgaatatggttatggcagctgggaaatgataaaaatggatcctgat
ctcagtttgacacataagattttgcctgacgatccagataagaaaccccaggcaaagcag
ttacagacccgtgcagactacctcattaaactactgaataaagaccttgcgaggaaggaa
gcacaaaggcttgctggagcaggcaattcaaagagaaggaaaacaagaactaagaagaat
aaggtgctaaaggctgcaaaattaaaagaggaaataaaaagtgattcttcaccacaaccc
tcagaaaaatctgatgaagatgatgatgagaataacaaggatgagattgtttcagtgaaa
catccacataaaaaatttaaagcagaaaaagaaaatgaagaaaagcctgagccagattct
ggtattaagaaggaagctgaagaaaaaagagagacaaaagaaaaggaaaataagagggat
ttgaaaagggagaaaaaagaaaaagaggataagaaagaattaaaagaaaaggatattaaa
gaaaagagagaaaacaaagtaaaagaatccacacagaaagaaaaagaagtaaaggaagag
aaggtaaatgaaatcaaatctgaaaataaagagaaagctaaaaaaattccattgctggat
actccagttcatattactgcatctagtgaaccagttcctatatcagaagaatctgaagag
ctagatcagaaaacttttagtgtgtgcaaagaaagaatgagacctgtcaaggcagcattg
aaacagctggatcgaccagagaagggcctttctgaaagagagcagctggaacatactaga
cagtgtcttatcaaaattggggatcatattactgaatgtctaaaggagtatacaaatcct
gaacaaattaaacagtggagaaaaaatttgtggatttttgtctctaagtttacagaattt
gatgcaagaaagctgcacaaactgtataaacatgcaatcaaaaaacgtcaagagtctcag
caacacaacgaccagaatattagcagcaatgtgaatacacatgtaattagaaatccagat
gtggaaagactgaaggagaatacaaaccatgatgacagtagcagggacagctactcctct
gataggtatctgtcacaattccacgatcatcataaagacaggcatcagggagatgcttac
aagaaaagtgactccaggaaaaggccctattcagccttcagcaatggaaaagatcacaga
gactgggatcactacaaacaagacagcagatactacagtgatagtaaacataggaagttt
gacgagtacaggagcagagaccacaggtcaagcctggaagggagtttaaaagacagccgg
gttcattcagatcaccgttcccattcagaccacaggatacatgcagatcaccgtccctct
tctgaatacagccatcataaatctcccagagattataggtaccactcagactggcaaatg
gaccacagagcttcaggtagtggcccaaggtcaccattggatcagaggtctccttatggt
tcaagatctcccctaggtcacagatctccatttgaacattcatcagatcacaaaagtaca
cctgaacatacatggagtagccggaaaacataa
DBGET
integrated database retrieval system
