Corvus cornix (hooded crow): 104693273
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Entry
104693273 CDS
T03546
Symbol
ZBTB48
Name
(RefSeq) LOW QUALITY PROTEIN: telomere zinc finger-associated protein
KO
K10519
zinc finger and BTB domain-containing protein 48
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104693273 (ZBTB48)
04121 Ubiquitin system [BR:
ccw04121
]
104693273 (ZBTB48)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
104693273 (ZBTB48)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
104693273 (ZBTB48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_15
zf-C2H2_6
zf-C2H2_16
zf-C2H2_2nd_ZNF462
Zap1_zf1
zf-C2H2_11
zf-C2H2_jaz
zf-Di19
zf-H2C2_5
BTB_KLHL33
zf-C2H2_8
zf-met
zf-C2H2_ZN142
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
104693273
NCBI-ProteinID:
XP_039419843
LinkDB
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Position
21:complement(2944931..2950053)
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AA seq
615 aa
AA seq
DB search
MAAAAAHSVRVLRELNRQRAAGQFCDATLGVGGREFXAHWPVLASCSRFFRARGPGXPVA
LPDGLADTFQLLLDFFYTGHLALTAHNRARLLAAAEQLGVPDAVALCRAFRPRPRRAAAA
TVRPGARGGPAARRAGGAXRGGRGAAGPGPGGEAAAARXRRCPSQGSPSAAEEAAVGGGG
RGDGDAEPLPRKKVLRSKKSPPAPGKAPGSRKGTAVPVECPTCHKXFLSKYYLKVHNRKH
TGEKPFECSKCGKCYFRKENLLEHEARNCMNRSEQVFTCSACPEVFKRRMELRLHMVSHT
GEMPYKCSSCSQQFMQKKDLQSHMIKLHGAPKPHACSTCSKCFLSRTELRLHEAFKHRGE
KLFVCEECGHRASSRNGLQMHIKAKHRNERPYVCEFCHHAFTQKANLNMHLRTHTGEKPF
QCHLCGKTFRTQASLDKHNRTHTGERPFSCEFCEQRFTEKGPLLRHVASRHQEGRPHFCH
ICGKTFKAVEQLRVHVRRHKGVRKFECTECGYKFTRQAHLRRHMEIHDRVENYNPRQRKL
RNLIIEDEKDVMVVLQPPPELEVGSAEVIVESLARGPLPEEVPVQKLCSNTNFSPADVIE
QSLIITTTIPEDCET
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcgcacagcgtgagggtgctgcgggagctgaaccggcagcgcgcg
gccgggcagttctgcgacgccacgctcggcgtgggcggccgcgagttcngcgcgcactgg
ccggtgctcgccagctgctcccgcttcttccgcgcgcgcggccccggcnggcccgtggcg
ctgcccgacggcctcgccgacaccttccagctgctgctcgacttcttctacaccgggcat
ctggcgctcacggcgcacaaccgtgcccgcctgctggcggccgccgagcagctcggcgtg
cccgacgccgtagcgctgtgccgcgccttccgcccgcggccccgccgcgccgccgccgcc
accgtccgccccggagcccgcggcggccccgcagcccggcgggcaggcggtgcgtgaagg
ggcgggaggggggcggcggggccggggcccggcggggaggcggcggcggcgcggtgacgc
cgctgtccctcgcagggctccccctcagccgcggaggaggcggcggtgggtggcggcggg
cggggggacggcgacgccgagccccttccgaggaaaaaggtgctgcggagcaaaaagagc
ccccccgctccgggaaaggcgccggggagcagaaaaggtacagcggtgccggtcgagtgc
cccacatgtcataaanactttctcagcaaatattaccttaaagtgcacaacaggaaacac
actggagagaagccatttgagtgttccaagtgtggcaaatgttactttagaaaagagaat
ctcctggaacacgaagccaggaactgcatgaaccgatcggaacaggtgttcacgtgttcg
gcctgccctgaggtgttcaagcggcggatggagctgcggctgcacatggtgtcacacact
ggggagatgccgtacaagtgctcctcctgctcacagcagttcatgcagaagaaggacctg
cagagccacatgataaagctgcacggcgcacccaagccccacgcgtgctcaacctgctcc
aagtgctttctgtcccggacagagctgcgcctgcacgaggccttcaagcaccgcggagag
aagctgtttgtgtgcgaagagtgcgggcacagggcctcgagccgcaatggcctccagatg
cacatcaaggccaagcacaggaatgagcggccctacgtgtgtgagttctgccaccatgcc
ttcacgcagaaagccaacctcaacatgcacctgcgcacgcacactggcgagaagcccttc
cagtgccatctctgtggcaagaccttccggacacaagcgagtctggacaagcacaaccgg
acacacactggggagcggccgttcagctgcgagttctgtgagcagcgcttcacagagaag
gggccgctgctgaggcacgtcgccagccggcaccaggaggggcggccccacttctgccac
atctgtgggaagacattcaaagcggtagaacagctgcgtgtccatgtccgccggcacaag
ggagtgaggaagtttgagtgcactgagtgtggctacaagttcacacggcaggctcacttg
agacgccacatggagatccacgaccgagtggagaactacaaccctcggcagcggaagctg
cggaacctgatcatcgaggatgagaaggacgtgatggtggtgctgcagccgccaccagag
ctggaggtgggctcagccgaggtgattgtggagtcgctggcccgtgggccactgcccgag
gaggtccctgtgcagaaactctgctcaaacacgaacttctccccagcggacgtgattgag
caatcgctgattataacaacaacgattcctgaagactgtgagacgtag
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